RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 ZNF232Q9UNY5 417 aa12.69□□□□□ -0.38
PKNOX1-209ENST00000560448 LIPGQ9Y5X9 500 aa12.69□□□□□ -0.38
PKNOX1-209ENST00000560448 GPC6Q9Y625 555 aaPredicted RBP12.69□□□□□ -0.38
PKNOX1-209ENST00000560448 DNAJC13O75165 2243 aa12.68□□□□□ -0.38
PKNOX1-209ENST00000560448 ZNF407Q9C0G0 2248 aa12.68□□□□□ -0.38
PKNOX1-209ENST00000560448 PRAMEF27A3QJZ7 478 aa12.68□□□□□ -0.38
PKNOX1-209ENST00000560448 CASQ2O14958 399 aaPredicted RBP12.68□□□□□ -0.38
PKNOX1-209ENST00000560448 DNAJA2O60884 412 aa12.68□□□□□ -0.38
PKNOX1-209ENST00000560448 AGFG2O95081 481 aa12.68□□□□□ -0.38
PKNOX1-209ENST00000560448 ZIC2O95409 532 aaPredicted RBP12.68□□□□□ -0.38
PKNOX1-209ENST00000560448 BAG2O95816 211 aa12.68□□□□□ -0.38
PKNOX1-209ENST00000560448 ARAFP10398 606 aa12.68□□□□□ -0.38
PKNOX1-209ENST00000560448 PEPDP12955 493 aa12.68□□□□□ -0.38
PKNOX1-209ENST00000560448 UQCRBP14927 111 aa12.68□□□□□ -0.38
PKNOX1-209ENST00000560448 HK1P19367 917 aa12.68□□□□□ -0.38
PKNOX1-209ENST00000560448 AGAP20933 346 aa12.68□□□□□ -0.38
PKNOX1-209ENST00000560448 GSK3BP49841 420 aa12.68□□□□□ -0.38
PKNOX1-209ENST00000560448 ZNF117Q03924 483 aa12.68□□□□□ -0.38
PKNOX1-209ENST00000560448 CHRNEQ04844 493 aa12.68□□□□□ -0.38
PKNOX1-209ENST00000560448 BNIP2Q12982 314 aa12.68□□□□□ -0.38
PKNOX1-209ENST00000560448 LARS2Q15031 903 aaKnown RBP12.68□□□□□ -0.38
PKNOX1-209ENST00000560448 EIPR1Q53HC9 387 aa12.68□□□□□ -0.38
PKNOX1-209ENST00000560448 WIPI1Q5MNZ9 446 aaPredicted RBP12.68□□□□□ -0.38
PKNOX1-209ENST00000560448 RNF220Q5VTB9 566 aa12.68□□□□□ -0.38
PKNOX1-209ENST00000560448 CD163Q86VB7 1156 aa12.68□□□□□ -0.38
PKNOX1-209ENST00000560448 DOLPP1Q86YN1 238 aa12.68□□□□□ -0.38
PKNOX1-209ENST00000560448 GRAMD2AQ8IUY3 354 aa12.68□□□□□ -0.38
PKNOX1-209ENST00000560448 GTPBP8Q8N3Z3 284 aaPredicted RBP12.68□□□□□ -0.38
PKNOX1-209ENST00000560448 C11orf65Q8NCR3 313 aa12.68□□□□□ -0.38
PKNOX1-209ENST00000560448 TMEM234Q8WY98 164 aa12.68□□□□□ -0.38
PKNOX1-209ENST00000560448 TMEM19Q96HH6 336 aa12.68□□□□□ -0.38
PKNOX1-209ENST00000560448 SFXN2Q96NB2 322 aa12.68□□□□□ -0.38
PKNOX1-209ENST00000560448 TIMP4Q99727 224 aa12.68□□□□□ -0.38
PKNOX1-209ENST00000560448 TRIM8Q9BZR9 551 aa12.68□□□□□ -0.38
PKNOX1-209ENST00000560448 KAT8Q9H7Z6 458 aaKnown RBP12.68□□□□□ -0.38
PKNOX1-209ENST00000560448 SPRR3Q9UBC9 169 aa12.68□□□□□ -0.38
PKNOX1-209ENST00000560448 ANGPT4Q9Y264 503 aa12.68□□□□□ -0.38
PKNOX1-209ENST00000560448 MEMO1Q9Y316 297 aa12.68□□□□□ -0.38
PKNOX1-209ENST00000560448 AP4B1Q9Y6B7 739 aa12.68□□□□□ -0.38
PKNOX1-209ENST00000560448 PRRC2CQ9Y520 2896 aaKnown RBP12.68□□□□□ -0.38
PKNOX1-209ENST00000560448 WIPF3A6NGB9 483 aa12.67□□□□□ -0.38
PKNOX1-209ENST00000560448 ETV2O00321 342 aaPredicted RBP12.67□□□□□ -0.38
PKNOX1-209ENST00000560448 CCL21O00585 134 aa12.67□□□□□ -0.38
PKNOX1-209ENST00000560448 LRRTM2O43300 516 aa12.67□□□□□ -0.38
PKNOX1-209ENST00000560448 SERPINB7O75635 380 aa12.67□□□□□ -0.38
PKNOX1-209ENST00000560448 WISP2O76076 250 aa12.67□□□□□ -0.38
PKNOX1-209ENST00000560448 BMP7P18075 431 aa12.67□□□□□ -0.38
PKNOX1-209ENST00000560448 PGCP20142 388 aa12.67□□□□□ -0.38
PKNOX1-209ENST00000560448 ATP6V1B2P21281 511 aa12.67□□□□□ -0.38
PKNOX1-209ENST00000560448 FKBP2P26885 142 aaKnown RBP12.67□□□□□ -0.38
PKNOX1-209ENST00000560448 ACVR2AP27037 513 aa12.67□□□□□ -0.38
PKNOX1-209ENST00000560448 HTR1EP28566 365 aa12.67□□□□□ -0.38
PKNOX1-209ENST00000560448 CDK6Q00534 326 aa12.67□□□□□ -0.38
PKNOX1-209ENST00000560448 LIPEQ05469 1076 aa12.67□□□□□ -0.38
PKNOX1-209ENST00000560448 SELPLGQ14242 412 aa12.67□□□□□ -0.38
PKNOX1-209ENST00000560448 C3AR1Q16581 482 aa12.67□□□□□ -0.38
PKNOX1-209ENST00000560448 TMEM44Q2T9K0 475 aa12.67□□□□□ -0.38
PKNOX1-209ENST00000560448 PLPPR5Q32ZL2 321 aa12.67□□□□□ -0.38
PKNOX1-209ENST00000560448 INTS11Q5TA45 600 aaKnown RBP12.67□□□□□ -0.38
PKNOX1-209ENST00000560448 RAET1LQ5VY80 246 aa12.67□□□□□ -0.38
PKNOX1-209ENST00000560448 LCN8Q6JVE9 175 aa12.67□□□□□ -0.38
PKNOX1-209ENST00000560448 YRDCQ86U90 279 aaKnown RBP12.67□□□□□ -0.38
PKNOX1-209ENST00000560448 DHFR2Q86XF0 187 aa12.67□□□□□ -0.38
PKNOX1-209ENST00000560448 GATSQ8NAP1 163 aa12.67□□□□□ -0.38
PKNOX1-209ENST00000560448 ST8SIA1Q92185 356 aa12.67□□□□□ -0.38
PKNOX1-209ENST00000560448 MRGPRX4Q96LA9 322 aa12.67□□□□□ -0.38
PKNOX1-209ENST00000560448 ZNF607Q96SK3 696 aa12.67□□□□□ -0.38
PKNOX1-209ENST00000560448 UGT2B28Q9BY64 529 aa12.67□□□□□ -0.38
PKNOX1-209ENST00000560448 MUC13Q9H3R2 512 aa12.67□□□□□ -0.38
PKNOX1-209ENST00000560448 RUBCNLQ9H714 662 aa12.67□□□□□ -0.38
PKNOX1-209ENST00000560448 MED17Q9NVC6 651 aa12.67□□□□□ -0.38
PKNOX1-209ENST00000560448 PAQR5Q9NXK6 330 aaPredicted RBP12.67□□□□□ -0.38
PKNOX1-209ENST00000560448 C6orf203Q9P0P8 240 aaPredicted RBP12.67□□□□□ -0.38
PKNOX1-209ENST00000560448 KCNE5Q9UJ90 142 aa12.67□□□□□ -0.38
PKNOX1-209ENST00000560448 TINAGQ9UJW2 476 aa12.67□□□□□ -0.38
PKNOX1-209ENST00000560448 NCKAP5O14513 1909 aa12.66□□□□□ -0.38
PKNOX1-209ENST00000560448 NPIPA5A0A0B4J1W7 369 aa12.66□□□□□ -0.38
PKNOX1-209ENST00000560448 NPIPA7E9PJI5 369 aa12.66□□□□□ -0.38
PKNOX1-209ENST00000560448 FAAHO00519 579 aa12.66□□□□□ -0.38
PKNOX1-209ENST00000560448 PGM3O95394 542 aa12.66□□□□□ -0.38
PKNOX1-209ENST00000560448 NUDT14O95848 222 aa12.66□□□□□ -0.38
PKNOX1-209ENST00000560448 NPIPA8P0DM63 369 aa12.66□□□□□ -0.38
PKNOX1-209ENST00000560448 MAP2K6P52564 334 aa12.66□□□□□ -0.38
PKNOX1-209ENST00000560448 SMSP52788 366 aa12.66□□□□□ -0.38
PKNOX1-209ENST00000560448 DLX5P56178 289 aa12.66□□□□□ -0.38
PKNOX1-209ENST00000560448 SKP2Q13309 424 aa12.66□□□□□ -0.38
PKNOX1-209ENST00000560448 MAPK11Q15759 364 aa12.66□□□□□ -0.38
PKNOX1-209ENST00000560448 CYP51A1Q16850 503 aa12.66□□□□□ -0.38
PKNOX1-209ENST00000560448 SLC25A53Q5H9E4 307 aa12.66□□□□□ -0.38
PKNOX1-209ENST00000560448 C1QL3Q5VWW1 255 aa12.66□□□□□ -0.38
PKNOX1-209ENST00000560448 ERICH5Q6P6B1 374 aa12.66□□□□□ -0.38
PKNOX1-209ENST00000560448 SPATA24Q86W54 205 aa12.66□□□□□ -0.38
PKNOX1-209ENST00000560448 PQLC1Q8N2U9 271 aa12.66□□□□□ -0.38
PKNOX1-209ENST00000560448 OR52P1PQ8NH57 321 aa12.66□□□□□ -0.38
PKNOX1-209ENST00000560448 ZPLD1Q8TCW7 415 aa12.66□□□□□ -0.38
PKNOX1-209ENST00000560448 SSC4DQ8WTU2 575 aa12.66□□□□□ -0.38
PKNOX1-209ENST00000560448 RASSF5Q8WWW0 418 aa12.66□□□□□ -0.38
PKNOX1-209ENST00000560448 SLCO4A1Q96BD0 722 aa12.66□□□□□ -0.38
PKNOX1-209ENST00000560448 ALG2Q9H553 416 aa12.66□□□□□ -0.38
PKNOX1-209ENST00000560448 ACTR3BQ9P1U1 418 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 601.5 ms