RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 LCKP06239 509 aa12.62□□□□□ -0.39
TRAF3-208ENST00000560371 MOGQ16653 247 aa12.62□□□□□ -0.39
TRAF3-208ENST00000560371 PRAMEF20Q5VT98 475 aa12.62□□□□□ -0.39
TRAF3-208ENST00000560371 ZFPM2Q8WW38 1151 aa12.62□□□□□ -0.39
TRAF3-208ENST00000560371 PRRC1Q96M27 445 aa12.62□□□□□ -0.39
TRAF3-208ENST00000560371 ULBP2Q9BZM5 246 aa12.62□□□□□ -0.39
TRAF3-208ENST00000560371 TWSG1Q9GZX9 223 aa12.62□□□□□ -0.39
TRAF3-208ENST00000560371 SLC6A17Q9H1V8 727 aa12.62□□□□□ -0.39
TRAF3-208ENST00000560371 SNAPC5O75971 98 aa12.61□□□□□ -0.39
TRAF3-208ENST00000560371 CD40LGP29965 261 aa12.61□□□□□ -0.39
TRAF3-208ENST00000560371 PROX2Q3B8N5 592 aa12.61□□□□□ -0.39
TRAF3-208ENST00000560371 ZNF791Q3KP31 576 aaPredicted RBP12.61□□□□□ -0.39
TRAF3-208ENST00000560371 PGM2L1Q6PCE3 622 aa12.61□□□□□ -0.39
TRAF3-208ENST00000560371 CNTN4Q8IWV2 1026 aa12.61□□□□□ -0.39
TRAF3-208ENST00000560371 CHPT1Q8WUD6 406 aa12.61□□□□□ -0.39
TRAF3-208ENST00000560371 SYT4Q9H2B2 425 aa12.61□□□□□ -0.39
TRAF3-208ENST00000560371 NPR2P20594 1047 aa12.61□□□□□ -0.39
TRAF3-208ENST00000560371 CCL11P51671 97 aa12.61□□□□□ -0.39
TRAF3-208ENST00000560371 ERVK-25P63136 954 aa12.61□□□□□ -0.39
TRAF3-208ENST00000560371 SDR9C7Q8NEX9 313 aa12.61□□□□□ -0.39
TRAF3-208ENST00000560371 CTRCQ99895 268 aa12.61□□□□□ -0.39
TRAF3-208ENST00000560371 LIN28AQ9H9Z2 209 aaKnown RBP12.61□□□□□ -0.39
TRAF3-208ENST00000560371 SPHK1Q9NYA1 384 aa12.61□□□□□ -0.39
TRAF3-208ENST00000560371 INHBCP55103 352 aa12.61□□□□□ -0.39
TRAF3-208ENST00000560371 ZNF423Q2M1K9 1284 aa12.61□□□□□ -0.39
TRAF3-208ENST00000560371 RUNDC3AQ59EK9 446 aa12.61□□□□□ -0.39
TRAF3-208ENST00000560371 GPR139Q6DWJ6 353 aa12.61□□□□□ -0.39
TRAF3-208ENST00000560371 ZNF300Q96RE9 604 aaPredicted RBP12.61□□□□□ -0.39
TRAF3-208ENST00000560371 DHCR7Q9UBM7 475 aaKnown RBP12.61□□□□□ -0.39
TRAF3-208ENST00000560371 LSM1O15116 133 aaKnown RBP12.61□□□□□ -0.39
TRAF3-208ENST00000560371 IFNA5P01569 189 aa12.61□□□□□ -0.39
TRAF3-208ENST00000560371 DUSP6Q16828 381 aa12.61□□□□□ -0.39
TRAF3-208ENST00000560371 MFSD9Q8NBP5 474 aa12.61□□□□□ -0.39
TRAF3-208ENST00000560371 GPR148Q8TDV2 347 aa12.61□□□□□ -0.39
TRAF3-208ENST00000560371 THAP10Q9P2Z0 257 aaPredicted RBP12.61□□□□□ -0.39
TRAF3-208ENST00000560371 HS3ST3A1Q9Y663 406 aa12.61□□□□□ -0.39
TRAF3-208ENST00000560371 DCDC2BA2VCK2 349 aa12.61□□□□□ -0.39
TRAF3-208ENST00000560371 IDUAP35475 653 aa12.61□□□□□ -0.39
TRAF3-208ENST00000560371 SMAD4Q13485 552 aaKnown RBP12.61□□□□□ -0.39
TRAF3-208ENST00000560371 PIP5KL1Q5T9C9 394 aa12.61□□□□□ -0.39
TRAF3-208ENST00000560371 SLC35F2Q8IXU6 374 aa12.61□□□□□ -0.39
TRAF3-208ENST00000560371 TXNDC15Q96J42 360 aa12.61□□□□□ -0.39
TRAF3-208ENST00000560371 AMDHD1Q96NU7 426 aa12.61□□□□□ -0.39
TRAF3-208ENST00000560371 ACSS1Q9NUB1 689 aaPredicted RBP12.61□□□□□ -0.39
TRAF3-208ENST00000560371 ZNF443Q9Y2A4 671 aaPredicted RBP12.61□□□□□ -0.39
TRAF3-208ENST00000560371 TRIM64CA6NLI5 447 aa12.61□□□□□ -0.39
TRAF3-208ENST00000560371 INMT-MINDY4F8WBC2 141 aa12.61□□□□□ -0.39
TRAF3-208ENST00000560371 GLSO94925 669 aaPredicted RBP12.61□□□□□ -0.39
TRAF3-208ENST00000560371 CHRNB4P30926 498 aa12.61□□□□□ -0.39
TRAF3-208ENST00000560371 PCDH17O14917 1159 aa12.6□□□□□ -0.39
TRAF3-208ENST00000560371 AIFM1O95831 613 aa12.6□□□□□ -0.39
TRAF3-208ENST00000560371 CHMP24386 653 aa12.6□□□□□ -0.39
TRAF3-208ENST00000560371 CMTM1Q8IZ96 169 aa12.6□□□□□ -0.39
TRAF3-208ENST00000560371 TEX19Q8NA77 164 aa12.6□□□□□ -0.39
TRAF3-208ENST00000560371 ACOT11Q8WXI4 607 aaPredicted RBP12.6□□□□□ -0.39
TRAF3-208ENST00000560371 C16orf58Q96GQ5 468 aa12.6□□□□□ -0.39
TRAF3-208ENST00000560371 DCAF13Q9NV06 445 aaKnown RBP12.6□□□□□ -0.39
TRAF3-208ENST00000560371 AKR1C4P17516 323 aa12.6□□□□□ -0.39
TRAF3-208ENST00000560371 RPS5P46782 204 aaKnown RBP12.6□□□□□ -0.39
TRAF3-208ENST00000560371 OR1D5P58170 312 aa12.6□□□□□ -0.39
TRAF3-208ENST00000560371 TNFRSF17Q02223 184 aa12.6□□□□□ -0.39
TRAF3-208ENST00000560371 MGAT3Q09327 533 aa12.6□□□□□ -0.39
TRAF3-208ENST00000560371 C17orf67Q0P5P2 114 aa12.6□□□□□ -0.39
TRAF3-208ENST00000560371 PTPRRQ15256 657 aa12.6□□□□□ -0.39
TRAF3-208ENST00000560371 TMEM176BQ3YBM2 270 aaPredicted RBP12.6□□□□□ -0.39
TRAF3-208ENST00000560371 TREX2Q9BQ50 279 aaPredicted RBP12.6□□□□□ -0.39
TRAF3-208ENST00000560371 BMP1P13497 986 aa12.6□□□□□ -0.39
TRAF3-208ENST00000560371 RAB38P57729 211 aa12.6□□□□□ -0.39
TRAF3-208ENST00000560371 SMAD2Q15796 467 aaKnown RBP12.6□□□□□ -0.39
TRAF3-208ENST00000560371 UBE2UQ5VVX9 321 aa12.6□□□□□ -0.39
TRAF3-208ENST00000560371 ATOH8Q96SQ7 321 aa12.6□□□□□ -0.39
TRAF3-208ENST00000560371 ABCG5Q9H222 651 aa12.6□□□□□ -0.39
TRAF3-208ENST00000560371 POLHQ9Y253 713 aa12.6□□□□□ -0.39
TRAF3-208ENST00000560371 SCGB2A2Q13296 93 aa12.6□□□□□ -0.39
TRAF3-208ENST00000560371 ENTPD8Q5MY95 495 aa12.6□□□□□ -0.39
TRAF3-208ENST00000560371 MRPL2Q5T653 305 aaKnown RBP12.6□□□□□ -0.39
TRAF3-208ENST00000560371 DUSP19Q8WTR2 217 aa12.6□□□□□ -0.39
TRAF3-208ENST00000560371 TMEM174Q8WUU8 243 aa12.6□□□□□ -0.39
TRAF3-208ENST00000560371 B3GNT3Q9Y2A9 372 aa12.6□□□□□ -0.39
TRAF3-208ENST00000560371 HSPB11Q9Y547 144 aa12.6□□□□□ -0.39
TRAF3-208ENST00000560371 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.6□□□□□ -0.39
TRAF3-208ENST00000560371 KDM4EB2RXH2 506 aaPredicted RBP12.6□□□□□ -0.39
TRAF3-208ENST00000560371 CREBL2O60519 120 aaPredicted RBP12.6□□□□□ -0.39
TRAF3-208ENST00000560371 MPIG6BO95866 241 aa12.6□□□□□ -0.39
TRAF3-208ENST00000560371 PBX2P40425 430 aa12.6□□□□□ -0.39
TRAF3-208ENST00000560371 LSSP48449 732 aa12.6□□□□□ -0.39
TRAF3-208ENST00000560371 POU3F1Q03052 451 aaPredicted RBP12.6□□□□□ -0.39
TRAF3-208ENST00000560371 KIAA0907Q7Z7F0 614 aaPredicted RBP12.6□□□□□ -0.39
TRAF3-208ENST00000560371 MRPL41Q8IXM3 137 aaKnown RBP12.6□□□□□ -0.39
TRAF3-208ENST00000560371 TMEM178AQ8NBL3 297 aa12.6□□□□□ -0.39
TRAF3-208ENST00000560371 ATP13A2Q9NQ11 1180 aa12.6□□□□□ -0.39
TRAF3-208ENST00000560371 VSX1Q9NZR4 365 aaPredicted RBP12.6□□□□□ -0.39
TRAF3-208ENST00000560371 KLHL9Q9P2J3 617 aa12.6□□□□□ -0.39
TRAF3-208ENST00000560371 RAD1O60671 282 aa12.6□□□□□ -0.39
TRAF3-208ENST00000560371 FNTBP49356 437 aa12.6□□□□□ -0.39
TRAF3-208ENST00000560371 ERVK-16P61578 105 aa12.6□□□□□ -0.39
TRAF3-208ENST00000560371 KCNJ10P78508 379 aa12.6□□□□□ -0.39
TRAF3-208ENST00000560371 GK3PQ14409 553 aa12.6□□□□□ -0.39
TRAF3-208ENST00000560371 OR13H1Q8NG92 308 aa12.6□□□□□ -0.39
TRAF3-208ENST00000560371 IMPA1P29218 277 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms