RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 MAGEB4O15481 346 aaPredicted RBP9.29□□□□□ -0.92
LRRC28-216ENST00000559819 PLOD3O60568 738 aa9.29□□□□□ -0.92
LRRC28-216ENST00000559819 CBX7O95931 251 aa9.29□□□□□ -0.92
LRRC28-216ENST00000559819 NGFRP08138 427 aa9.29□□□□□ -0.92
LRRC28-216ENST00000559819 TYRP1P17643 537 aa9.29□□□□□ -0.92
LRRC28-216ENST00000559819 HCCSP53701 268 aa9.29□□□□□ -0.92
LRRC28-216ENST00000559819 MRPS15P82914 257 aaKnown RBP9.29□□□□□ -0.92
LRRC28-216ENST00000559819 GARNL3Q5VVW2 1013 aa9.29□□□□□ -0.92
LRRC28-216ENST00000559819 LNX2Q8N448 690 aa9.29□□□□□ -0.92
LRRC28-216ENST00000559819 ARL14Q8N4G2 192 aa9.29□□□□□ -0.92
LRRC28-216ENST00000559819 TOR1AIP2Q8NFQ8 470 aa9.29□□□□□ -0.92
LRRC28-216ENST00000559819 OR13C5Q8NGS8 318 aa9.29□□□□□ -0.92
LRRC28-216ENST00000559819 OR5W2Q8NH69 310 aa9.29□□□□□ -0.92
LRRC28-216ENST00000559819 ANKRD9Q96BM1 317 aaPredicted RBP9.29□□□□□ -0.92
LRRC28-216ENST00000559819 PEX11GQ96HA9 241 aa9.29□□□□□ -0.92
LRRC28-216ENST00000559819 JAM3Q9BX67 310 aa9.29□□□□□ -0.92
LRRC28-216ENST00000559819 OR2B2Q9GZK3 357 aa9.29□□□□□ -0.92
LRRC28-216ENST00000559819 FAM60AQ9NP50 221 aa9.29□□□□□ -0.92
LRRC28-216ENST00000559819 DUSP22Q9NRW4 184 aa9.29□□□□□ -0.92
LRRC28-216ENST00000559819 NLKQ9UBE8 527 aa9.29□□□□□ -0.92
LRRC28-216ENST00000559819 CPNE7Q9UBL6 633 aa9.29□□□□□ -0.92
LRRC28-216ENST00000559819 MYO9BQ13459 2157 aa9.28□□□□□ -0.92
LRRC28-216ENST00000559819 OR2W5A6NFC9 320 aa9.28□□□□□ -0.92
LRRC28-216ENST00000559819 PRR23D1E9PI22 279 aaPredicted RBP9.28□□□□□ -0.92
LRRC28-216ENST00000559819 J3QLW9 94 aa9.28□□□□□ -0.92
LRRC28-216ENST00000559819 BRINP1O60477 761 aa9.28□□□□□ -0.92
LRRC28-216ENST00000559819 GALR3O60755 368 aaPredicted RBP9.28□□□□□ -0.92
LRRC28-216ENST00000559819 COQ9O75208 318 aa9.28□□□□□ -0.92
LRRC28-216ENST00000559819 IGKV1D-16P01601 117 aa9.28□□□□□ -0.92
LRRC28-216ENST00000559819 PRR23D2P0DMB1 279 aaPredicted RBP9.28□□□□□ -0.92
LRRC28-216ENST00000559819 ZNF19P17023 458 aa9.28□□□□□ -0.92
LRRC28-216ENST00000559819 ZNF10P21506 573 aaPredicted RBP9.28□□□□□ -0.92
LRRC28-216ENST00000559819 TPMTP51580 245 aa9.28□□□□□ -0.92
LRRC28-216ENST00000559819 SSX6Q7RTT6 188 aa9.28□□□□□ -0.92
LRRC28-216ENST00000559819 SLC22A18ASQ8N1D0 253 aa9.28□□□□□ -0.92
LRRC28-216ENST00000559819 C17orf47Q8NEP4 570 aa9.28□□□□□ -0.92
LRRC28-216ENST00000559819 OR9A4Q8NGU2 314 aa9.28□□□□□ -0.92
LRRC28-216ENST00000559819 ASB12Q8WXK4 309 aa9.28□□□□□ -0.92
LRRC28-216ENST00000559819 TNFRSF13CQ96RJ3 184 aa9.28□□□□□ -0.92
LRRC28-216ENST00000559819 TEAD3Q99594 435 aa9.28□□□□□ -0.92
LRRC28-216ENST00000559819 TWSG1Q9GZX9 223 aa9.28□□□□□ -0.92
LRRC28-216ENST00000559819 CCDC86Q9H6F5 360 aaKnown RBP9.28□□□□□ -0.92
LRRC28-216ENST00000559819 CMC2Q9NRP2 79 aa9.28□□□□□ -0.92
LRRC28-216ENST00000559819 EXTL2Q9UBQ6 330 aa9.28□□□□□ -0.92
LRRC28-216ENST00000559819 ZMIZ1Q9ULJ6 1067 aa9.28□□□□□ -0.92
LRRC28-216ENST00000559819 SATB2Q9UPW6 733 aa9.28□□□□□ -0.92
LRRC28-216ENST00000559819 POLHQ9Y253 713 aa9.28□□□□□ -0.92
LRRC28-216ENST00000559819 MED31Q9Y3C7 131 aa9.28□□□□□ -0.92
LRRC28-216ENST00000559819 FANCMQ8IYD8 2048 aa9.28□□□□□ -0.92
LRRC28-216ENST00000559819 ARHGEF17Q96PE2 2063 aaPredicted RBP9.28□□□□□ -0.92
LRRC28-216ENST00000559819 A0A087WV62 115 aa9.28□□□□□ -0.92
LRRC28-216ENST00000559819 A0A0G2JMP0 313 aa9.28□□□□□ -0.92
LRRC28-216ENST00000559819 A0A0X1KG70 313 aa9.28□□□□□ -0.92
LRRC28-216ENST00000559819 A0A1B0GWA3 101 aa9.28□□□□□ -0.92
LRRC28-216ENST00000559819 CENPXA8MT69 81 aa9.28□□□□□ -0.92
LRRC28-216ENST00000559819 C2orf74A8MZ97 194 aa9.28□□□□□ -0.92
LRRC28-216ENST00000559819 HCN1O60741 890 aa9.28□□□□□ -0.92
LRRC28-216ENST00000559819 CDC123O75794 336 aaPredicted RBP9.28□□□□□ -0.92
LRRC28-216ENST00000559819 BMP8BP34820 402 aa9.28□□□□□ -0.92
LRRC28-216ENST00000559819 ACVR1BP36896 505 aa9.28□□□□□ -0.92
LRRC28-216ENST00000559819 MAP3K8P41279 467 aa9.28□□□□□ -0.92
LRRC28-216ENST00000559819 LBX1P52954 281 aa9.28□□□□□ -0.92
LRRC28-216ENST00000559819 OR12D2P58182 307 aa9.28□□□□□ -0.92
LRRC28-216ENST00000559819 ZNF85Q03923 595 aa9.28□□□□□ -0.92
LRRC28-216ENST00000559819 C1orf61Q13536 156 aa9.28□□□□□ -0.92
LRRC28-216ENST00000559819 FAM53BQ14153 422 aa9.28□□□□□ -0.92
LRRC28-216ENST00000559819 NNATQ16517 81 aa9.28□□□□□ -0.92
LRRC28-216ENST00000559819 NDUFAF6Q330K2 333 aa9.28□□□□□ -0.92
LRRC28-216ENST00000559819 BMP8AQ7Z5Y6 402 aa9.28□□□□□ -0.92
LRRC28-216ENST00000559819 RNF113BQ8IZP6 322 aaKnown RBP9.28□□□□□ -0.92
LRRC28-216ENST00000559819 GHDCQ8N2G8 530 aa9.28□□□□□ -0.92
LRRC28-216ENST00000559819 OR4M2Q8NGB6 313 aa9.28□□□□□ -0.92
LRRC28-216ENST00000559819 OR5J2Q8NH18 312 aa9.28□□□□□ -0.92
LRRC28-216ENST00000559819 RPLP0P6Q8NHW5 317 aa9.28□□□□□ -0.92
LRRC28-216ENST00000559819 C4orf36Q96KX1 117 aa9.28□□□□□ -0.92
LRRC28-216ENST00000559819 STACQ99469 402 aa9.28□□□□□ -0.92
LRRC28-216ENST00000559819 CDCA3Q99618 268 aaPredicted RBP9.28□□□□□ -0.92
LRRC28-216ENST00000559819 COQ7Q99807 217 aa9.28□□□□□ -0.92
LRRC28-216ENST00000559819 WACQ9BTA9 647 aa9.28□□□□□ -0.92
LRRC28-216ENST00000559819 TMEM43Q9BTV4 400 aa9.28□□□□□ -0.92
LRRC28-216ENST00000559819 FN3KQ9H479 309 aa9.28□□□□□ -0.92
LRRC28-216ENST00000559819 CLEC1BQ9P126 229 aa9.28□□□□□ -0.92
LRRC28-216ENST00000559819 ALG5Q9Y673 324 aa9.28□□□□□ -0.92
LRRC28-216ENST00000559819 SPACA6W5XKT8 324 aa9.28□□□□□ -0.92
LRRC28-216ENST00000559819 A0A0J9YY10 115 aa9.27□□□□□ -0.92
LRRC28-216ENST00000559819 TCRBV21S2A2A0A5A6 115 aa9.27□□□□□ -0.92
LRRC28-216ENST00000559819 FAM86C2PA6NEL3 165 aa9.27□□□□□ -0.92
LRRC28-216ENST00000559819 LRRN3E7EW58 273 aa9.27□□□□□ -0.92
LRRC28-216ENST00000559819 TGFBR3LH3BV60 316 aa9.27□□□□□ -0.92
LRRC28-216ENST00000559819 LYRM1O43325 122 aa9.27□□□□□ -0.92
LRRC28-216ENST00000559819 LANCL1O43813 399 aa9.27□□□□□ -0.92
LRRC28-216ENST00000559819 RCBTB2O95199 551 aa9.27□□□□□ -0.92
LRRC28-216ENST00000559819 EIF4EP06730 217 aaKnown RBP9.27□□□□□ -0.92
LRRC28-216ENST00000559819 ILF3Q12906 894 aaKnown RBP eCLIP9.27□□□□□ -0.92
LRRC28-216ENST00000559819 ERV3-1Q14264 604 aa9.27□□□□□ -0.92
LRRC28-216ENST00000559819 GALEQ14376 348 aa9.27□□□□□ -0.92
LRRC28-216ENST00000559819 CCDC85BQ15834 202 aaPredicted RBP9.27□□□□□ -0.92
LRRC28-216ENST00000559819 CCDC92Q53HC0 331 aaPredicted RBP9.27□□□□□ -0.92
LRRC28-216ENST00000559819 C6orf183Q5T699 404 aa9.27□□□□□ -0.92
LRRC28-216ENST00000559819 ZNF57Q68EA5 555 aaPredicted RBP9.27□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms