RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.85■□□□□ 0.29
CASC4-209ENST00000559222 FAM53CQ9NYF3 392 aa16.85■□□□□ 0.29
CASC4-209ENST00000559222 USP22Q9UPT9 525 aa16.85■□□□□ 0.29
CASC4-209ENST00000559222 ZNF443Q9Y2A4 671 aaPredicted RBP16.85■□□□□ 0.29
CASC4-209ENST00000559222 SPTBN1Q01082 2364 aaKnown RBP16.85■□□□□ 0.29
CASC4-209ENST00000559222 TGM6O95932 706 aa16.84■□□□□ 0.29
CASC4-209ENST00000559222 NID1P14543 1247 aa16.84■□□□□ 0.29
CASC4-209ENST00000559222 TRMT5Q32P41 509 aaKnown RBP16.84■□□□□ 0.29
CASC4-209ENST00000559222 RABL3Q5HYI8 236 aa16.84■□□□□ 0.29
CASC4-209ENST00000559222 RIPPLY2Q5TAB7 128 aa16.84■□□□□ 0.29
CASC4-209ENST00000559222 MTDHQ86UE4 582 aaKnown RBP16.84■□□□□ 0.29
CASC4-209ENST00000559222 LACC1Q8IV20 430 aa16.84■□□□□ 0.29
CASC4-209ENST00000559222 CLIP4Q8N3C7 705 aa16.84■□□□□ 0.29
CASC4-209ENST00000559222 TOR1AIP2Q8NFQ8 470 aa16.84■□□□□ 0.29
CASC4-209ENST00000559222 FIG4Q92562 907 aa16.84■□□□□ 0.29
CASC4-209ENST00000559222 RCN3Q96D15 328 aa16.84■□□□□ 0.29
CASC4-209ENST00000559222 ADGRG7Q96K78 797 aa16.84■□□□□ 0.29
CASC4-209ENST00000559222 SLC35A3Q9Y2D2 325 aa16.84■□□□□ 0.29
CASC4-209ENST00000559222 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.83■□□□□ 0.28
CASC4-209ENST00000559222 A0A0J9YW62 118 aa16.83■□□□□ 0.28
CASC4-209ENST00000559222 MBD3L4A6NDZ8 208 aaPredicted RBP16.83■□□□□ 0.28
CASC4-209ENST00000559222 MBD3L3A6NE82 208 aaPredicted RBP16.83■□□□□ 0.28
CASC4-209ENST00000559222 MBD3L5A6NJ08 208 aaPredicted RBP16.83■□□□□ 0.28
CASC4-209ENST00000559222 CD8B2A6NJW9 211 aa16.83■□□□□ 0.28
CASC4-209ENST00000559222 FAM47E-STBD1D6RA91 191 aa16.83■□□□□ 0.28
CASC4-209ENST00000559222 PRSS44E7EML9 344 aa16.83■□□□□ 0.28
CASC4-209ENST00000559222 PGM3O95394 542 aa16.83■□□□□ 0.28
CASC4-209ENST00000559222 CLDN14O95500 239 aa16.83■□□□□ 0.28
CASC4-209ENST00000559222 DBIP07108 87 aaKnown RBP16.83■□□□□ 0.28
CASC4-209ENST00000559222 HOXD4P09016 255 aaPredicted RBP16.83■□□□□ 0.28
CASC4-209ENST00000559222 GKN3PP0CG01 181 aa16.83■□□□□ 0.28
CASC4-209ENST00000559222 IL7RP16871 459 aa16.83■□□□□ 0.28
CASC4-209ENST00000559222 PPIBP23284 216 aaKnown RBP16.83■□□□□ 0.28
CASC4-209ENST00000559222 AQP1P29972 269 aa16.83■□□□□ 0.28
CASC4-209ENST00000559222 CEACAM8P31997 349 aaPredicted RBP16.83■□□□□ 0.28
CASC4-209ENST00000559222 SFTPDP35247 375 aa16.83■□□□□ 0.28
CASC4-209ENST00000559222 PTGER4P35408 488 aa16.83■□□□□ 0.28
CASC4-209ENST00000559222 AGFG1P52594 562 aaKnown RBP16.83■□□□□ 0.28
CASC4-209ENST00000559222 ZNF136P52737 540 aa16.83■□□□□ 0.28
CASC4-209ENST00000559222 EEF1A1P68104 462 aaKnown RBP16.83■□□□□ 0.28
CASC4-209ENST00000559222 CDK6Q00534 326 aa16.83■□□□□ 0.28
CASC4-209ENST00000559222 FOXF2Q12947 444 aa16.83■□□□□ 0.28
CASC4-209ENST00000559222 CBFBQ13951 182 aa16.83■□□□□ 0.28
CASC4-209ENST00000559222 BCL2A1Q16548 175 aa16.83■□□□□ 0.28
CASC4-209ENST00000559222 POMZP3Q6PJE2 187 aa16.83■□□□□ 0.28
CASC4-209ENST00000559222 XKRXQ6PP77 449 aa16.83■□□□□ 0.28
CASC4-209ENST00000559222 LURAP1LQ8IV03 231 aa16.83■□□□□ 0.28
CASC4-209ENST00000559222 RELL2Q8NC24 303 aaPredicted RBP16.83■□□□□ 0.28
CASC4-209ENST00000559222 ATP6V1C2Q8NEY4 427 aa16.83■□□□□ 0.28
CASC4-209ENST00000559222 MBD3L2Q8NHZ7 208 aaPredicted RBP16.83■□□□□ 0.28
CASC4-209ENST00000559222 PINK1Q9BXM7 581 aa16.83■□□□□ 0.28
CASC4-209ENST00000559222 MYLK2Q9H1R3 596 aa16.83■□□□□ 0.28
CASC4-209ENST00000559222 PIF1Q9H611 641 aa16.83■□□□□ 0.28
CASC4-209ENST00000559222 GMPR2Q9P2T1 348 aaKnown RBP16.83■□□□□ 0.28
CASC4-209ENST00000559222 AP4B1Q9Y6B7 739 aa16.83■□□□□ 0.28
CASC4-209ENST00000559222 A0A0G2JPF8 293 aa16.82■□□□□ 0.28
CASC4-209ENST00000559222 EVPLLA8MZ36 301 aa16.82■□□□□ 0.28
CASC4-209ENST00000559222 HNRNPCL2B2RXH8 293 aa16.82■□□□□ 0.28
CASC4-209ENST00000559222 HNRNPCL3B7ZW38 293 aa16.82■□□□□ 0.28
CASC4-209ENST00000559222 ETV2O00321 342 aaPredicted RBP16.82■□□□□ 0.28
CASC4-209ENST00000559222 EIF1AYO14602 144 aaKnown RBP16.82■□□□□ 0.28
CASC4-209ENST00000559222 TNFSF11O14788 317 aa16.82■□□□□ 0.28
CASC4-209ENST00000559222 FRS3O43559 492 aa16.82■□□□□ 0.28
CASC4-209ENST00000559222 HNRNPCL1O60812 293 aaKnown RBP16.82■□□□□ 0.28
CASC4-209ENST00000559222 HNRNPCL4P0DMR1 293 aa16.82■□□□□ 0.28
CASC4-209ENST00000559222 PRG2P13727 222 aa16.82■□□□□ 0.28
CASC4-209ENST00000559222 AGAP20933 346 aa16.82■□□□□ 0.28
CASC4-209ENST00000559222 CHRNB4P30926 498 aa16.82■□□□□ 0.28
CASC4-209ENST00000559222 GZMMP51124 257 aa16.82■□□□□ 0.28
CASC4-209ENST00000559222 SESN3P58005 492 aa16.82■□□□□ 0.28
CASC4-209ENST00000559222 ART3Q13508 389 aa16.82■□□□□ 0.28
CASC4-209ENST00000559222 SCARB2Q14108 478 aa16.82■□□□□ 0.28
CASC4-209ENST00000559222 SLC25A53Q5H9E4 307 aa16.82■□□□□ 0.28
CASC4-209ENST00000559222 NANOGP8Q6NSW7 305 aa16.82■□□□□ 0.28
CASC4-209ENST00000559222 CPLX4Q7Z7G2 160 aa16.82■□□□□ 0.28
CASC4-209ENST00000559222 PEX5LQ8IYB4 626 aa16.82■□□□□ 0.28
CASC4-209ENST00000559222 ZZZ3Q8IYH5 903 aa16.82■□□□□ 0.28
CASC4-209ENST00000559222 GCNT2Q8N0V5 402 aa16.82■□□□□ 0.28
CASC4-209ENST00000559222 MEIOBQ8N635 442 aa16.82■□□□□ 0.28
CASC4-209ENST00000559222 BBS10Q8TAM1 723 aa16.82■□□□□ 0.28
CASC4-209ENST00000559222 OIT3Q8WWZ8 545 aa16.82■□□□□ 0.28
CASC4-209ENST00000559222 LRRC58Q96CX6 371 aa16.82■□□□□ 0.28
CASC4-209ENST00000559222 KAT8Q9H7Z6 458 aaKnown RBP16.82■□□□□ 0.28
CASC4-209ENST00000559222 NANOGQ9H9S0 305 aa16.82■□□□□ 0.28
CASC4-209ENST00000559222 CALHM2Q9HA72 323 aa16.82■□□□□ 0.28
CASC4-209ENST00000559222 HHATLQ9HCP6 504 aa16.82■□□□□ 0.28
CASC4-209ENST00000559222 BCL2L10Q9HD36 194 aa16.82■□□□□ 0.28
CASC4-209ENST00000559222 EXOSC3Q9NQT5 275 aaKnown RBP16.82■□□□□ 0.28
CASC4-209ENST00000559222 THUMPD1Q9NXG2 353 aaKnown RBP16.82■□□□□ 0.28
CASC4-209ENST00000559222 COQ3Q9NZJ6 369 aa16.82■□□□□ 0.28
CASC4-209ENST00000559222 CALML5Q9NZT1 146 aa16.82■□□□□ 0.28
CASC4-209ENST00000559222 GPC6Q9Y625 555 aaPredicted RBP16.82■□□□□ 0.28
CASC4-209ENST00000559222 INTS1Q8N201 2190 aaKnown RBP16.82■□□□□ 0.28
CASC4-209ENST00000559222 CDHR4A6H8M9 788 aa16.81■□□□□ 0.28
CASC4-209ENST00000559222 C5orf58C9J3I9 102 aa16.81■□□□□ 0.28
CASC4-209ENST00000559222 GCM2O75603 506 aaPredicted RBP16.81■□□□□ 0.28
CASC4-209ENST00000559222 PABPC4LP0CB38 370 aaKnown RBP16.81■□□□□ 0.28
CASC4-209ENST00000559222 COX4I1P13073 169 aa16.81■□□□□ 0.28
CASC4-209ENST00000559222 GP1BBP13224 206 aa16.81■□□□□ 0.28
CASC4-209ENST00000559222 HTR1EP28566 365 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms