RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.85□□□□□ -0.83
TPM1-217ENST00000559108 PNPLA3Q9NST1 481 aa9.85□□□□□ -0.83
TPM1-217ENST00000559108 ADA2Q9NZK5 511 aa9.85□□□□□ -0.83
TPM1-217ENST00000559108 CALML5Q9NZT1 146 aa9.85□□□□□ -0.83
TPM1-217ENST00000559108 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.85□□□□□ -0.83
TPM1-217ENST00000559108 B4GALT7Q9UBV7 327 aa9.85□□□□□ -0.83
TPM1-217ENST00000559108 TINAGQ9UJW2 476 aa9.85□□□□□ -0.83
TPM1-217ENST00000559108 DKKL1Q9UK85 242 aa9.85□□□□□ -0.83
TPM1-217ENST00000559108 ZNF337Q9Y3M9 751 aa9.85□□□□□ -0.83
TPM1-217ENST00000559108 NCOA6Q14686 2063 aaPredicted RBP9.85□□□□□ -0.83
TPM1-217ENST00000559108 ELOVL7A1L3X0 281 aa9.84□□□□□ -0.83
TPM1-217ENST00000559108 NPIPA2E9PIF3 369 aa9.84□□□□□ -0.83
TPM1-217ENST00000559108 NPIPA3F8WFD2 350 aa9.84□□□□□ -0.83
TPM1-217ENST00000559108 GTPBP1O00178 669 aaKnown RBP9.84□□□□□ -0.83
TPM1-217ENST00000559108 CXCR6O00574 342 aa9.84□□□□□ -0.83
TPM1-217ENST00000559108 SLC19A2O60779 497 aa9.84□□□□□ -0.83
TPM1-217ENST00000559108 LYPD3O95274 346 aa9.84□□□□□ -0.83
TPM1-217ENST00000559108 THY1P04216 161 aa9.84□□□□□ -0.83
TPM1-217ENST00000559108 GGT1P19440 569 aa9.84□□□□□ -0.83
TPM1-217ENST00000559108 KLK2P20151 261 aa9.84□□□□□ -0.83
TPM1-217ENST00000559108 MSX1P28360 303 aa9.84□□□□□ -0.83
TPM1-217ENST00000559108 KCNJ5P48544 419 aa9.84□□□□□ -0.83
TPM1-217ENST00000559108 LHX2P50458 406 aa9.84□□□□□ -0.83
TPM1-217ENST00000559108 DLX5P56178 289 aa9.84□□□□□ -0.83
TPM1-217ENST00000559108 CLDN20P56880 219 aa9.84□□□□□ -0.83
TPM1-217ENST00000559108 MS4A2Q01362 244 aa9.84□□□□□ -0.83
TPM1-217ENST00000559108 EPS8Q12929 822 aa9.84□□□□□ -0.83
TPM1-217ENST00000559108 VEZF1Q14119 521 aa9.84□□□□□ -0.83
TPM1-217ENST00000559108 NHSL2Q5HYW2 709 aa9.84□□□□□ -0.83
TPM1-217ENST00000559108 C1QL3Q5VWW1 255 aa9.84□□□□□ -0.83
TPM1-217ENST00000559108 VASNQ6EMK4 673 aa9.84□□□□□ -0.83
TPM1-217ENST00000559108 Q6ZPB1 254 aaPredicted RBP9.84□□□□□ -0.83
TPM1-217ENST00000559108 SEM1Q6ZVN7 128 aa9.84□□□□□ -0.83
TPM1-217ENST00000559108 CD163Q86VB7 1156 aa9.84□□□□□ -0.83
TPM1-217ENST00000559108 DOLPP1Q86YN1 238 aa9.84□□□□□ -0.83
TPM1-217ENST00000559108 ARMC8Q8IUR7 673 aa9.84□□□□□ -0.83
TPM1-217ENST00000559108 GRAMD2AQ8IUY3 354 aa9.84□□□□□ -0.83
TPM1-217ENST00000559108 GHDCQ8N2G8 530 aa9.84□□□□□ -0.83
TPM1-217ENST00000559108 GTPBP8Q8N3Z3 284 aaPredicted RBP9.84□□□□□ -0.83
TPM1-217ENST00000559108 MARVELD2Q8N4S9 558 aa9.84□□□□□ -0.83
TPM1-217ENST00000559108 GALNT11Q8NCW6 608 aa9.84□□□□□ -0.83
TPM1-217ENST00000559108 OR5M9Q8NGP3 310 aa9.84□□□□□ -0.83
TPM1-217ENST00000559108 WDYHV1Q96HA8 205 aa9.84□□□□□ -0.83
TPM1-217ENST00000559108 DOCK7Q96N67 2140 aa9.84□□□□□ -0.83
TPM1-217ENST00000559108 TIMP4Q99727 224 aa9.84□□□□□ -0.83
TPM1-217ENST00000559108 SH3BGRL2Q9UJC5 107 aa9.84□□□□□ -0.83
TPM1-217ENST00000559108 SLC35A3Q9Y2D2 325 aa9.84□□□□□ -0.83
TPM1-217ENST00000559108 MRPS18CQ9Y3D5 142 aaKnown RBP9.84□□□□□ -0.83
TPM1-217ENST00000559108 FAM215AQ9Y5M1 114 aa9.84□□□□□ -0.83
TPM1-217ENST00000559108 FLNCQ14315 2725 aa9.84□□□□□ -0.83
TPM1-217ENST00000559108 MED12LQ86YW9 2145 aa9.83□□□□□ -0.84
TPM1-217ENST00000559108 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.83□□□□□ -0.84
TPM1-217ENST00000559108 C7orf72A4D263 438 aa9.83□□□□□ -0.84
TPM1-217ENST00000559108 H3BNH8 94 aa9.83□□□□□ -0.84
TPM1-217ENST00000559108 SUSD5O60279 629 aa9.83□□□□□ -0.84
TPM1-217ENST00000559108 HCN1O60741 890 aa9.83□□□□□ -0.84
TPM1-217ENST00000559108 LGI1O95970 557 aa9.83□□□□□ -0.84
TPM1-217ENST00000559108 HSD17B1P14061 328 aa9.83□□□□□ -0.84
TPM1-217ENST00000559108 ZNF708P17019 499 aa9.83□□□□□ -0.84
TPM1-217ENST00000559108 ATP6V1B2P21281 511 aa9.83□□□□□ -0.84
TPM1-217ENST00000559108 KDELR2P33947 212 aa9.83□□□□□ -0.84
TPM1-217ENST00000559108 PTGS2P35354 604 aa9.83□□□□□ -0.84
TPM1-217ENST00000559108 SUMO3P55854 103 aaPredicted RBP9.83□□□□□ -0.84
TPM1-217ENST00000559108 SESN3P58005 492 aa9.83□□□□□ -0.84
TPM1-217ENST00000559108 MXRA7P84157 204 aa9.83□□□□□ -0.84
TPM1-217ENST00000559108 GNA13Q14344 377 aa9.83□□□□□ -0.84
TPM1-217ENST00000559108 NRF1Q16656 503 aa9.83□□□□□ -0.84
TPM1-217ENST00000559108 CTU2Q2VPK5 515 aaKnown RBP9.83□□□□□ -0.84
TPM1-217ENST00000559108 LRRC23Q53EV4 343 aaPredicted RBP9.83□□□□□ -0.84
TPM1-217ENST00000559108 KRTCAP3Q53RY4 240 aa9.83□□□□□ -0.84
TPM1-217ENST00000559108 CYBRD1Q53TN4 286 aa9.83□□□□□ -0.84
TPM1-217ENST00000559108 SLC25A53Q5H9E4 307 aa9.83□□□□□ -0.84
TPM1-217ENST00000559108 RAET1LQ5VY80 246 aa9.83□□□□□ -0.84
TPM1-217ENST00000559108 ARHGAP11AQ6P4F7 1023 aa9.83□□□□□ -0.84
TPM1-217ENST00000559108 ERICH5Q6P6B1 374 aa9.83□□□□□ -0.84
TPM1-217ENST00000559108 VTCN1Q7Z7D3 282 aa9.83□□□□□ -0.84
TPM1-217ENST00000559108 CMIPQ8IY22 773 aa9.83□□□□□ -0.84
TPM1-217ENST00000559108 TOR1AIP2Q8NFQ8 470 aa9.83□□□□□ -0.84
TPM1-217ENST00000559108 OR6T1Q8NGN1 323 aa9.83□□□□□ -0.84
TPM1-217ENST00000559108 FAM57AQ8TBR7 257 aa9.83□□□□□ -0.84
TPM1-217ENST00000559108 FIG4Q92562 907 aa9.83□□□□□ -0.84
TPM1-217ENST00000559108 PMM1Q92871 262 aa9.83□□□□□ -0.84
TPM1-217ENST00000559108 SFXN2Q96NB2 322 aa9.83□□□□□ -0.84
TPM1-217ENST00000559108 KCTD14Q9BQ13 255 aaPredicted RBP9.83□□□□□ -0.84
TPM1-217ENST00000559108 PINK1Q9BXM7 581 aa9.83□□□□□ -0.84
TPM1-217ENST00000559108 PRDM14Q9GZV8 571 aa9.83□□□□□ -0.84
TPM1-217ENST00000559108 TMEM185BQ9H7F4 350 aa9.83□□□□□ -0.84
TPM1-217ENST00000559108 OSGIN2Q9Y236 505 aa9.83□□□□□ -0.84
TPM1-217ENST00000559108 SNX13Q9Y5W8 968 aa9.83□□□□□ -0.84
TPM1-217ENST00000559108 HELZ2Q9BYK8 2649 aaKnown RBP9.82□□□□□ -0.84
TPM1-217ENST00000559108 TMEM247A6NEH6 219 aa9.82□□□□□ -0.84
TPM1-217ENST00000559108 CFAP73A6NFT4 308 aa9.82□□□□□ -0.84
TPM1-217ENST00000559108 H3BML4 177 aa9.82□□□□□ -0.84
TPM1-217ENST00000559108 ARPC2O15144 300 aa9.82□□□□□ -0.84
TPM1-217ENST00000559108 NUDT14O95848 222 aa9.82□□□□□ -0.84
TPM1-217ENST00000559108 FESP07332 822 aa9.82□□□□□ -0.84
TPM1-217ENST00000559108 PEPDP12955 493 aa9.82□□□□□ -0.84
TPM1-217ENST00000559108 PTNP21246 168 aa9.82□□□□□ -0.84
TPM1-217ENST00000559108 HTR1EP28566 365 aa9.82□□□□□ -0.84
TPM1-217ENST00000559108 OR1E2P47887 323 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms