RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 CXorf40BQ96DE9 158 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 ZBED6CLQ96FA7 236 aaPredicted RBP1.87□□□□□ -2.11
GABPB1-209ENST00000559100 PIWIL1Q96J94 861 aaKnown RBP1.87□□□□□ -2.11
GABPB1-209ENST00000559100 SERAC1Q96JX3 654 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 LINC00479Q96M42 142 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 FMO2Q99518 471 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 OPRPNQ99935 248 aaPredicted RBP1.87□□□□□ -2.11
GABPB1-209ENST00000559100 CENPKQ9BS16 269 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 SYT11Q9BT88 431 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 DPH7Q9BTV6 452 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 TRIM62Q9BVG3 475 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 HCAR1Q9BXC0 346 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 SLITRK2Q9H156 845 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 ADNPQ9H2P0 1102 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 TUBB1Q9H4B7 451 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 IKZF5Q9H5V7 419 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 HEXA-AS1Q9H8Q6 139 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 PANK3Q9H999 370 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 NHEJ1Q9H9Q4 299 aaPredicted RBP1.87□□□□□ -2.11
GABPB1-209ENST00000559100 POPDC2Q9HBU9 364 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 TXLNGQ9NUQ3 528 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 PAK1IP1Q9NWT1 392 aaPredicted RBP1.87□□□□□ -2.11
GABPB1-209ENST00000559100 FAM120CQ9NX05 1096 aaKnown RBP1.87□□□□□ -2.11
GABPB1-209ENST00000559100 ARMCX1Q9P291 453 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 ZNF580Q9UK33 172 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 IKZF2Q9UKS7 526 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 KIAA1257Q9ULG3 409 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 SPATA2Q9UM82 520 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 COPS3Q9UNS2 423 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 AK6Q9Y3D8 172 aaKnown RBP1.87□□□□□ -2.11
GABPB1-209ENST00000559100 PPIAL4AQ9Y536 164 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 TTC21BQ7Z4L5 1316 aa1.87□□□□□ -2.11
GABPB1-209ENST00000559100 TRAV9-2A0A087WT02 112 aa1.86□□□□□ -2.11
GABPB1-209ENST00000559100 IQANK1A0A1B0GTG1 560 aa1.86□□□□□ -2.11
GABPB1-209ENST00000559100 SMIM28A0A1B0GU29 152 aa1.86□□□□□ -2.11
GABPB1-209ENST00000559100 A0A1B0GUS0 222 aa1.86□□□□□ -2.11
GABPB1-209ENST00000559100 NDUFAF8A1L188 74 aa1.86□□□□□ -2.11
GABPB1-209ENST00000559100 A8MXQ7 604 aa1.86□□□□□ -2.11
GABPB1-209ENST00000559100 WRBO00258 174 aa1.86□□□□□ -2.11
GABPB1-209ENST00000559100 SOCS3O14543 225 aa1.86□□□□□ -2.11
GABPB1-209ENST00000559100 CASQ2O14958 399 aaPredicted RBP1.86□□□□□ -2.11
GABPB1-209ENST00000559100 TAPBPO15533 448 aa1.86□□□□□ -2.11
GABPB1-209ENST00000559100 OR10H3O60404 316 aa1.86□□□□□ -2.11
GABPB1-209ENST00000559100 DFNA5O60443 496 aa1.86□□□□□ -2.11
GABPB1-209ENST00000559100 TOM1O60784 492 aa1.86□□□□□ -2.11
GABPB1-209ENST00000559100 PFKFB2O60825 505 aa1.86□□□□□ -2.11
GABPB1-209ENST00000559100 ZFAND5O76080 213 aa1.86□□□□□ -2.11
GABPB1-209ENST00000559100 CLDN9O95484 217 aa1.86□□□□□ -2.11
GABPB1-209ENST00000559100 OXSR1O95747 527 aaPredicted RBP1.86□□□□□ -2.11
GABPB1-209ENST00000559100 AP2A1O95782 977 aa1.86□□□□□ -2.11
GABPB1-209ENST00000559100 HPP00738 406 aa1.86□□□□□ -2.11
GABPB1-209ENST00000559100 IGKV3-20P01619 116 aa1.86□□□□□ -2.11
GABPB1-209ENST00000559100 CAPN1P07384 714 aa1.86□□□□□ -2.11
GABPB1-209ENST00000559100 CD55P08174 381 aa1.86□□□□□ -2.11
GABPB1-209ENST00000559100 ANXA8P13928 327 aa1.86□□□□□ -2.11
GABPB1-209ENST00000559100 ETS2P15036 469 aa1.86□□□□□ -2.11
GABPB1-209ENST00000559100 DPEP1P16444 411 aa1.86□□□□□ -2.11
GABPB1-209ENST00000559100 EIF2S2P20042 333 aaKnown RBP1.86□□□□□ -2.11
GABPB1-209ENST00000559100 HOXD10P28358 340 aa1.86□□□□□ -2.11
GABPB1-209ENST00000559100 CD1CP29017 333 aa1.86□□□□□ -2.11
GABPB1-209ENST00000559100 FGF9P31371 208 aaPredicted RBP1.86□□□□□ -2.11
GABPB1-209ENST00000559100 HNRNPH3P31942 346 aaKnown RBP1.86□□□□□ -2.11
GABPB1-209ENST00000559100 CCR1P32246 355 aa1.86□□□□□ -2.11
GABPB1-209ENST00000559100 PEX19P40855 299 aa1.86□□□□□ -2.11
GABPB1-209ENST00000559100 MAGEA9P43362 315 aa1.86□□□□□ -2.11
GABPB1-209ENST00000559100 XCR1P46094 333 aa1.86□□□□□ -2.11
GABPB1-209ENST00000559100 STARP49675 285 aa1.86□□□□□ -2.11
GABPB1-209ENST00000559100 IST1P53990 364 aa1.86□□□□□ -2.11
GABPB1-209ENST00000559100 HSPA2P54652 639 aa1.86□□□□□ -2.11
GABPB1-209ENST00000559100 LIM2P55344 173 aa1.86□□□□□ -2.11
GABPB1-209ENST00000559100 PRMT2P55345 433 aa1.86□□□□□ -2.11
GABPB1-209ENST00000559100 RPS8P62241 208 aaKnown RBP1.86□□□□□ -2.11
GABPB1-209ENST00000559100 IRX1P78414 480 aaPredicted RBP1.86□□□□□ -2.11
GABPB1-209ENST00000559100 ELAVL2Q12926 359 aaKnown RBP1.86□□□□□ -2.11
GABPB1-209ENST00000559100 C1orf61Q13536 156 aa1.86□□□□□ -2.11
GABPB1-209ENST00000559100 KCNJ11Q14654 390 aa1.86□□□□□ -2.11
GABPB1-209ENST00000559100 SLC15A2Q16348 729 aa1.86□□□□□ -2.11
GABPB1-209ENST00000559100 SLC22A6Q4U2R8 563 aa1.86□□□□□ -2.11
GABPB1-209ENST00000559100 BCL7AQ4VC05 210 aa1.86□□□□□ -2.11
GABPB1-209ENST00000559100 SFT2D3Q587I9 215 aa1.86□□□□□ -2.11
GABPB1-209ENST00000559100 C6orf226Q5I0X4 101 aa1.86□□□□□ -2.11
GABPB1-209ENST00000559100 NHLRC3Q5JS37 347 aa1.86□□□□□ -2.11
GABPB1-209ENST00000559100 C1orf185Q5T7R7 199 aa1.86□□□□□ -2.11
GABPB1-209ENST00000559100 ANXA8L1Q5VT79 327 aa1.86□□□□□ -2.11
GABPB1-209ENST00000559100 LIPNQ5VXI9 398 aa1.86□□□□□ -2.11
GABPB1-209ENST00000559100 LEMD1Q68G75 181 aa1.86□□□□□ -2.11
GABPB1-209ENST00000559100 CCDC137Q6PK04 289 aaKnown RBP1.86□□□□□ -2.11
GABPB1-209ENST00000559100 TMEM107Q6UX40 140 aa1.86□□□□□ -2.11
GABPB1-209ENST00000559100 STAC2Q6ZMT1 411 aa1.86□□□□□ -2.11
GABPB1-209ENST00000559100 CCDC73Q6ZRK6 1079 aa1.86□□□□□ -2.11
GABPB1-209ENST00000559100 EIF3MQ7L2H7 374 aaKnown RBP1.86□□□□□ -2.11
GABPB1-209ENST00000559100 TIPARPQ7Z3E1 657 aaKnown RBP1.86□□□□□ -2.11
GABPB1-209ENST00000559100 NRMQ8IXM6 262 aa1.86□□□□□ -2.11
GABPB1-209ENST00000559100 CSNK1A1LQ8N752 337 aa1.86□□□□□ -2.11
GABPB1-209ENST00000559100 OR9A4Q8NGU2 314 aa1.86□□□□□ -2.11
GABPB1-209ENST00000559100 RAB3IL1Q8TBN0 382 aa1.86□□□□□ -2.11
GABPB1-209ENST00000559100 SLC22A8Q8TCC7 542 aa1.86□□□□□ -2.11
GABPB1-209ENST00000559100 BRSK1Q8TDC3 778 aa1.86□□□□□ -2.11
GABPB1-209ENST00000559100 VN1R17PQ8TDU5 208 aa1.86□□□□□ -2.11
GABPB1-209ENST00000559100 TFB1MQ8WVM0 346 aaKnown RBP1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms