RNA–Protein interactions for RNA: ENST00000557933.5

LDLR-205, Transcript of low density lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LDLR, Length 2,941 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-205ENST00000557933 CXorf58Q96LI9 332 aa11.46□□□□□ -0.58
LDLR-205ENST00000557933 LINC00052Q96N35 136 aa11.46□□□□□ -0.58
LDLR-205ENST00000557933 AP1M2Q9Y6Q5 423 aa11.46□□□□□ -0.58
LDLR-205ENST00000557933 RTTNQ86VV8 2226 aa11.46□□□□□ -0.58
LDLR-205ENST00000557933 MTCL1Q9Y4B5 1905 aaKnown RBP11.45□□□□□ -0.58
LDLR-205ENST00000557933 A0A1B0GVT2 93 aa11.45□□□□□ -0.58
LDLR-205ENST00000557933 PAPLNO95428 1278 aa11.45□□□□□ -0.58
LDLR-205ENST00000557933 EN2P19622 333 aaPredicted RBP11.45□□□□□ -0.58
LDLR-205ENST00000557933 ANXA7P20073 488 aaKnown RBP11.45□□□□□ -0.58
LDLR-205ENST00000557933 GSTM3P21266 225 aa11.45□□□□□ -0.58
LDLR-205ENST00000557933 ADH7P40394 386 aa11.45□□□□□ -0.58
LDLR-205ENST00000557933 RPS27P42677 84 aaKnown RBP11.45□□□□□ -0.58
LDLR-205ENST00000557933 RPS15P62841 145 aaKnown RBP11.45□□□□□ -0.58
LDLR-205ENST00000557933 SNTB2Q13425 540 aaKnown RBP11.45□□□□□ -0.58
LDLR-205ENST00000557933 NNATQ16517 81 aa11.45□□□□□ -0.58
LDLR-205ENST00000557933 CDC73Q6P1J9 531 aa11.45□□□□□ -0.58
LDLR-205ENST00000557933 KIAA1324Q6UXG2 1013 aaKnown RBP11.45□□□□□ -0.58
LDLR-205ENST00000557933 RASSF6Q6ZTQ3 369 aa11.45□□□□□ -0.58
LDLR-205ENST00000557933 RD3Q7Z3Z2 195 aa11.45□□□□□ -0.58
LDLR-205ENST00000557933 GRASPQ7Z6J2 395 aaPredicted RBP11.45□□□□□ -0.58
LDLR-205ENST00000557933 LRRC28Q86X40 367 aaPredicted RBP11.45□□□□□ -0.58
LDLR-205ENST00000557933 MS4A15Q8N5U1 240 aa11.45□□□□□ -0.58
LDLR-205ENST00000557933 SDR9C7Q8NEX9 313 aa11.45□□□□□ -0.58
LDLR-205ENST00000557933 OR7G2Q8NG99 324 aa11.45□□□□□ -0.58
LDLR-205ENST00000557933 OR2L2Q8NH16 312 aa11.45□□□□□ -0.58
LDLR-205ENST00000557933 ANGPTL6Q8NI99 470 aa11.45□□□□□ -0.58
LDLR-205ENST00000557933 LGALS14Q8TCE9 139 aa11.45□□□□□ -0.58
LDLR-205ENST00000557933 PPP1R16AQ96I34 528 aa11.45□□□□□ -0.58
LDLR-205ENST00000557933 COQ10AQ96MF6 247 aa11.45□□□□□ -0.58
LDLR-205ENST00000557933 PTCHD1Q96NR3 888 aa11.45□□□□□ -0.58
LDLR-205ENST00000557933 MBNL1Q9NR56 388 aaKnown RBP11.45□□□□□ -0.58
LDLR-205ENST00000557933 KCMF1Q9P0J7 381 aa11.45□□□□□ -0.58
LDLR-205ENST00000557933 HCN3Q9P1Z3 774 aa11.45□□□□□ -0.58
LDLR-205ENST00000557933 ADAM30Q9UKF2 790 aa11.45□□□□□ -0.58
LDLR-205ENST00000557933 B8ZZF3 427 aa11.45□□□□□ -0.58
LDLR-205ENST00000557933 ARPC1BO15143 372 aaKnown RBP11.45□□□□□ -0.58
LDLR-205ENST00000557933 H2AFB2P0C5Z0 115 aa11.45□□□□□ -0.58
LDLR-205ENST00000557933 SLC35G4P0C7Q5 338 aa11.45□□□□□ -0.58
LDLR-205ENST00000557933 HTR1FP30939 366 aa11.45□□□□□ -0.58
LDLR-205ENST00000557933 CAMK2DQ13557 499 aa11.45□□□□□ -0.58
LDLR-205ENST00000557933 FGL2Q14314 439 aa11.45□□□□□ -0.58
LDLR-205ENST00000557933 MLF2Q15773 248 aaPredicted RBP11.45□□□□□ -0.58
LDLR-205ENST00000557933 RPE65Q16518 533 aa11.45□□□□□ -0.58
LDLR-205ENST00000557933 AANATQ16613 207 aa11.45□□□□□ -0.58
LDLR-205ENST00000557933 ARHGAP15Q53QZ3 475 aa11.45□□□□□ -0.58
LDLR-205ENST00000557933 PRPF38BQ5VTL8 546 aaKnown RBP11.45□□□□□ -0.58
LDLR-205ENST00000557933 BICRALQ6AI39 1079 aa11.45□□□□□ -0.58
LDLR-205ENST00000557933 DNAAF1Q8NEP3 725 aa11.45□□□□□ -0.58
LDLR-205ENST00000557933 ELMOD3Q96FG2 381 aa11.45□□□□□ -0.58
LDLR-205ENST00000557933 INSM2Q96T92 566 aaPredicted RBP11.45□□□□□ -0.58
LDLR-205ENST00000557933 ARPC5LQ9BPX5 153 aa11.45□□□□□ -0.58
LDLR-205ENST00000557933 C1QTNF7Q9BXJ2 289 aa11.45□□□□□ -0.58
LDLR-205ENST00000557933 B3GNT2Q9NY97 397 aa11.45□□□□□ -0.58
LDLR-205ENST00000557933 INSL6Q9Y581 213 aa11.45□□□□□ -0.58
LDLR-205ENST00000557933 RPS10-NUDT3A0A1W2PQS6 291 aa11.44□□□□□ -0.58
LDLR-205ENST00000557933 GMFGO60234 142 aa11.44□□□□□ -0.58
LDLR-205ENST00000557933 LILRB3O75022 631 aa11.44□□□□□ -0.58
LDLR-205ENST00000557933 LDB3O75112 727 aa11.44□□□□□ -0.58
LDLR-205ENST00000557933 FGF18O76093 207 aa11.44□□□□□ -0.58
LDLR-205ENST00000557933 ADRB3P13945 408 aa11.44□□□□□ -0.58
LDLR-205ENST00000557933 RAD52P43351 418 aa11.44□□□□□ -0.58
LDLR-205ENST00000557933 NDUFA9Q16795 377 aa11.44□□□□□ -0.58
LDLR-205ENST00000557933 TRMT12Q53H54 448 aaKnown RBP11.44□□□□□ -0.58
LDLR-205ENST00000557933 NIPAL3Q6P499 406 aa11.44□□□□□ -0.58
LDLR-205ENST00000557933 LCTLQ6UWM7 567 aa11.44□□□□□ -0.58
LDLR-205ENST00000557933 OR4K13Q8NH42 304 aa11.44□□□□□ -0.58
LDLR-205ENST00000557933 ACOT11Q8WXI4 607 aaPredicted RBP11.44□□□□□ -0.58
LDLR-205ENST00000557933 OTUB2Q96DC9 234 aa11.44□□□□□ -0.58
LDLR-205ENST00000557933 SCMH1Q96GD3 660 aa11.44□□□□□ -0.58
LDLR-205ENST00000557933 GPR137Q96N19 417 aa11.44□□□□□ -0.58
LDLR-205ENST00000557933 MTIF3Q9H2K0 278 aaKnown RBP11.44□□□□□ -0.58
LDLR-205ENST00000557933 FOLH1BQ9HBA9 442 aa11.44□□□□□ -0.58
LDLR-205ENST00000557933 DLL4Q9NR61 685 aa11.44□□□□□ -0.58
LDLR-205ENST00000557933 SATB2Q9UPW6 733 aa11.44□□□□□ -0.58
LDLR-205ENST00000557933 TRANK1O15050 2925 aa11.44□□□□□ -0.58
LDLR-205ENST00000557933 A0A0G2JK05 382 aa11.44□□□□□ -0.58
LDLR-205ENST00000557933 HNRNPCL2B2RXH8 293 aa11.44□□□□□ -0.58
LDLR-205ENST00000557933 C5orf67F2Z3F1 127 aa11.44□□□□□ -0.58
LDLR-205ENST00000557933 RPP14O95059 124 aaKnown RBP11.44□□□□□ -0.58
LDLR-205ENST00000557933 RHOP08100 348 aa11.44□□□□□ -0.58
LDLR-205ENST00000557933 NPR2P20594 1047 aa11.44□□□□□ -0.58
LDLR-205ENST00000557933 ERVFC1P60507 584 aa11.44□□□□□ -0.58
LDLR-205ENST00000557933 PUDPQ08623 228 aa11.44□□□□□ -0.58
LDLR-205ENST00000557933 GSG1Q2KHT4 349 aa11.44□□□□□ -0.58
LDLR-205ENST00000557933 C12orf76Q8N812 135 aaPredicted RBP11.44□□□□□ -0.58
LDLR-205ENST00000557933 LSMEM1Q8N8F7 131 aa11.44□□□□□ -0.58
LDLR-205ENST00000557933 OSTF1Q92882 214 aa11.44□□□□□ -0.58
LDLR-205ENST00000557933 KCTD12Q96CX2 325 aaKnown RBP11.44□□□□□ -0.58
LDLR-205ENST00000557933 KCNN2Q9H2S1 579 aa11.44□□□□□ -0.58
LDLR-205ENST00000557933 TRIM36Q9NQ86 728 aa11.44□□□□□ -0.58
LDLR-205ENST00000557933 IL20Q9NYY1 176 aa11.44□□□□□ -0.58
LDLR-205ENST00000557933 ZNF69Q9UC07 566 aa11.44□□□□□ -0.58
LDLR-205ENST00000557933 WDR45Q9Y484 360 aa11.44□□□□□ -0.58
LDLR-205ENST00000557933 FRYLO94915 3013 aa11.44□□□□□ -0.58
LDLR-205ENST00000557933 LRRK1Q38SD2 2015 aa11.44□□□□□ -0.58
LDLR-205ENST00000557933 A0A0A6YYD5 115 aa11.43□□□□□ -0.58
LDLR-205ENST00000557933 TRABD2BA6NFA1 517 aa11.43□□□□□ -0.58
LDLR-205ENST00000557933 OR2W5A6NFC9 320 aa11.43□□□□□ -0.58
LDLR-205ENST00000557933 ATP6V1G2-DDX39BF2Z307 99 aa11.43□□□□□ -0.58
LDLR-205ENST00000557933 M0R233 179 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms