RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 RNF145Q96MT1 663 aa23.1■■□□□ 1.29
SMAD6-202ENST00000557916 PRDM14Q9GZV8 571 aa23.1■■□□□ 1.29
SMAD6-202ENST00000557916 TP63Q9H3D4 680 aaPredicted RBP23.1■■□□□ 1.29
SMAD6-202ENST00000557916 CAMK2AQ9UQM7 478 aa23.1■■□□□ 1.29
SMAD6-202ENST00000557916 FASNP49327 2511 aaKnown RBP23.1■■□□□ 1.29
SMAD6-202ENST00000557916 GCN1Q92616 2671 aaKnown RBP23.1■■□□□ 1.29
SMAD6-202ENST00000557916 M0QX08 132 aa23.09■■□□□ 1.29
SMAD6-202ENST00000557916 PRKCAP17252 672 aa23.09■■□□□ 1.29
SMAD6-202ENST00000557916 MXRA7P84157 204 aa23.09■■□□□ 1.29
SMAD6-202ENST00000557916 FOXF1Q12946 379 aa23.09■■□□□ 1.29
SMAD6-202ENST00000557916 VEZF1Q14119 521 aa23.09■■□□□ 1.29
SMAD6-202ENST00000557916 C3P1Q6ZMU1 363 aa23.09■■□□□ 1.29
SMAD6-202ENST00000557916 TRPM8Q7Z2W7 1104 aa23.09■■□□□ 1.29
SMAD6-202ENST00000557916 FJX1Q86VR8 437 aa23.09■■□□□ 1.29
SMAD6-202ENST00000557916 ZNF440Q8IYI8 595 aa23.09■■□□□ 1.29
SMAD6-202ENST00000557916 PM20D2Q8IYS1 436 aa23.09■■□□□ 1.29
SMAD6-202ENST00000557916 FBXO27Q8NI29 283 aa23.09■■□□□ 1.29
SMAD6-202ENST00000557916 RSPO3Q9BXY4 272 aaPredicted RBP23.09■■□□□ 1.29
SMAD6-202ENST00000557916 FLNCQ14315 2725 aa23.09■■□□□ 1.29
SMAD6-202ENST00000557916 TNFSF12-TNFSF13A0A0A6YY99 330 aa23.08■■□□□ 1.29
SMAD6-202ENST00000557916 CFAP73A6NFT4 308 aa23.08■■□□□ 1.29
SMAD6-202ENST00000557916 FIGNL2A6NMB9 653 aa23.08■■□□□ 1.29
SMAD6-202ENST00000557916 H3BML4 177 aa23.08■■□□□ 1.29
SMAD6-202ENST00000557916 CCL21O00585 134 aa23.08■■□□□ 1.29
SMAD6-202ENST00000557916 ADAM11O75078 769 aa23.08■■□□□ 1.29
SMAD6-202ENST00000557916 MFN2O95140 757 aa23.08■■□□□ 1.29
SMAD6-202ENST00000557916 POU3F2P20265 443 aaPredicted RBP23.08■■□□□ 1.29
SMAD6-202ENST00000557916 LHX2P50458 406 aa23.08■■□□□ 1.29
SMAD6-202ENST00000557916 DHRS4L2Q6PKH6 230 aa23.08■■□□□ 1.29
SMAD6-202ENST00000557916 MICU2Q8IYU8 434 aa23.08■■□□□ 1.29
SMAD6-202ENST00000557916 ZNF563Q8TA94 476 aa23.08■■□□□ 1.29
SMAD6-202ENST00000557916 SPAG4Q9NPE6 437 aa23.08■■□□□ 1.29
SMAD6-202ENST00000557916 GMPR2Q9P2T1 348 aaKnown RBP23.08■■□□□ 1.29
SMAD6-202ENST00000557916 ABCD2Q9UBJ2 740 aa23.08■■□□□ 1.29
SMAD6-202ENST00000557916 SLC5A6Q9Y289 635 aa23.08■■□□□ 1.29
SMAD6-202ENST00000557916 MED12Q93074 2177 aa23.08■■□□□ 1.29
SMAD6-202ENST00000557916 TENM4Q6N022 2769 aa23.08■■□□□ 1.29
SMAD6-202ENST00000557916 ELOVL7A1L3X0 281 aa23.08■■□□□ 1.28
SMAD6-202ENST00000557916 WDR1O75083 606 aa23.08■■□□□ 1.28
SMAD6-202ENST00000557916 GKN3PP0CG01 181 aa23.08■■□□□ 1.28
SMAD6-202ENST00000557916 PEPDP12955 493 aa23.08■■□□□ 1.28
SMAD6-202ENST00000557916 CPN1P15169 458 aa23.08■■□□□ 1.28
SMAD6-202ENST00000557916 PSMA4P25789 261 aaKnown RBP23.08■■□□□ 1.28
SMAD6-202ENST00000557916 ADH6P28332 368 aa23.08■■□□□ 1.28
SMAD6-202ENST00000557916 EEFSECP57772 596 aaKnown RBP23.08■■□□□ 1.28
SMAD6-202ENST00000557916 SLC25A3Q00325 362 aa23.08■■□□□ 1.28
SMAD6-202ENST00000557916 SRYQ05066 204 aa23.08■■□□□ 1.28
SMAD6-202ENST00000557916 DMTNQ08495 405 aa23.08■■□□□ 1.28
SMAD6-202ENST00000557916 EPS8Q12929 822 aa23.08■■□□□ 1.28
SMAD6-202ENST00000557916 CCDC80Q76M96 950 aa23.08■■□□□ 1.28
SMAD6-202ENST00000557916 ULK2Q8IYT8 1036 aa23.08■■□□□ 1.28
SMAD6-202ENST00000557916 BHLHE22Q8NFJ8 381 aaPredicted RBP23.08■■□□□ 1.28
SMAD6-202ENST00000557916 TMEM234Q8WY98 164 aa23.08■■□□□ 1.28
SMAD6-202ENST00000557916 ST8SIA1Q92185 356 aa23.08■■□□□ 1.28
SMAD6-202ENST00000557916 MRGPRX4Q96LA9 322 aa23.08■■□□□ 1.28
SMAD6-202ENST00000557916 ALG2Q9H553 416 aa23.08■■□□□ 1.28
SMAD6-202ENST00000557916 NDE1Q9NXR1 346 aa23.08■■□□□ 1.28
SMAD6-202ENST00000557916 ADA2Q9NZK5 511 aa23.08■■□□□ 1.28
SMAD6-202ENST00000557916 TMEM181Q9P2C4 612 aa23.08■■□□□ 1.28
SMAD6-202ENST00000557916 AP4B1Q9Y6B7 739 aa23.08■■□□□ 1.28
SMAD6-202ENST00000557916 HEATR5AQ86XA9 2040 aa23.07■■□□□ 1.28
SMAD6-202ENST00000557916 ETV2O00321 342 aaPredicted RBP23.07■■□□□ 1.28
SMAD6-202ENST00000557916 AP3D1O14617 1153 aa23.07■■□□□ 1.28
SMAD6-202ENST00000557916 TPST1O60507 370 aa23.07■■□□□ 1.28
SMAD6-202ENST00000557916 SEMA7AO75326 666 aa23.07■■□□□ 1.28
SMAD6-202ENST00000557916 OPN1SWP03999 348 aa23.07■■□□□ 1.28
SMAD6-202ENST00000557916 GABRA1P14867 456 aa23.07■■□□□ 1.28
SMAD6-202ENST00000557916 UQCRBP14927 111 aa23.07■■□□□ 1.28
SMAD6-202ENST00000557916 ZNF708P17019 499 aa23.07■■□□□ 1.28
SMAD6-202ENST00000557916 CALB2P22676 271 aa23.07■■□□□ 1.28
SMAD6-202ENST00000557916 GSK3BP49841 420 aa23.07■■□□□ 1.28
SMAD6-202ENST00000557916 CLDN18P56856 261 aa23.07■■□□□ 1.28
SMAD6-202ENST00000557916 SESN3P58005 492 aa23.07■■□□□ 1.28
SMAD6-202ENST00000557916 BCL2A1Q16548 175 aa23.07■■□□□ 1.28
SMAD6-202ENST00000557916 SLC25A53Q5H9E4 307 aa23.07■■□□□ 1.28
SMAD6-202ENST00000557916 C16orf89Q6UX73 402 aa23.07■■□□□ 1.28
SMAD6-202ENST00000557916 ZNF550Q7Z398 422 aa23.07■■□□□ 1.28
SMAD6-202ENST00000557916 PGAM4Q8N0Y7 254 aa23.07■■□□□ 1.28
SMAD6-202ENST00000557916 EID3Q8N140 333 aa23.07■■□□□ 1.28
SMAD6-202ENST00000557916 SMYD1Q8NB12 490 aa23.07■■□□□ 1.28
SMAD6-202ENST00000557916 PINK1Q9BXM7 581 aa23.07■■□□□ 1.28
SMAD6-202ENST00000557916 ACER3Q9NUN7 267 aa23.07■■□□□ 1.28
SMAD6-202ENST00000557916 ERRFI1Q9UJM3 462 aaPredicted RBP23.07■■□□□ 1.28
SMAD6-202ENST00000557916 MEMO1Q9Y316 297 aa23.07■■□□□ 1.28
SMAD6-202ENST00000557916 AHRRA9YTQ3 701 aa23.06■■□□□ 1.28
SMAD6-202ENST00000557916 E9PLN8 166 aa23.06■■□□□ 1.28
SMAD6-202ENST00000557916 NTN1O95631 604 aa23.06■■□□□ 1.28
SMAD6-202ENST00000557916 GP1BBP13224 206 aa23.06■■□□□ 1.28
SMAD6-202ENST00000557916 ACVR2AP27037 513 aa23.06■■□□□ 1.28
SMAD6-202ENST00000557916 IDH2P48735 452 aaKnown RBP23.06■■□□□ 1.28
SMAD6-202ENST00000557916 GLIPR1L2Q4G1C9 344 aa23.06■■□□□ 1.28
SMAD6-202ENST00000557916 UBQLNLQ8IYU4 475 aa23.06■■□□□ 1.28
SMAD6-202ENST00000557916 SLC26A7Q8TE54 656 aa23.06■■□□□ 1.28
SMAD6-202ENST00000557916 SMPDL3BQ92485 455 aa23.06■■□□□ 1.28
SMAD6-202ENST00000557916 SLC35B4Q969S0 331 aa23.06■■□□□ 1.28
SMAD6-202ENST00000557916 VKORC1Q9BQB6 163 aa23.06■■□□□ 1.28
SMAD6-202ENST00000557916 STOML1Q9UBI4 398 aa23.06■■□□□ 1.28
SMAD6-202ENST00000557916 SLC13A4Q9UKG4 626 aa23.06■■□□□ 1.28
SMAD6-202ENST00000557916 HIVEP3Q5T1R4 2406 aa23.05■■□□□ 1.28
SMAD6-202ENST00000557916 B2RBV5 119 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms