RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 NUP50Q9UKX7 468 aa3.22□□□□□ -1.89
TDP1-217ENST00000557782 SCML2Q9UQR0 700 aa3.22□□□□□ -1.89
TDP1-217ENST00000557782 MRPS18CQ9Y3D5 142 aaKnown RBP3.22□□□□□ -1.89
TDP1-217ENST00000557782 RHBDD3Q9Y3P4 386 aa3.22□□□□□ -1.89
TDP1-217ENST00000557782 KIAA1210Q9ULL0 1709 aa3.22□□□□□ -1.89
TDP1-217ENST00000557782 IGHV2-70DA0A0C4DH43 119 aa3.21□□□□□ -1.9
TDP1-217ENST00000557782 A0A1B0GUH1 482 aa3.21□□□□□ -1.9
TDP1-217ENST00000557782 ERICH2A1L162 156 aa3.21□□□□□ -1.9
TDP1-217ENST00000557782 OR6C74A6NCV1 312 aa3.21□□□□□ -1.9
TDP1-217ENST00000557782 C12orf71A8MTZ7 269 aa3.21□□□□□ -1.9
TDP1-217ENST00000557782 TEX46H3BTG2 121 aa3.21□□□□□ -1.9
TDP1-217ENST00000557782 DLGAP1O14490 977 aa3.21□□□□□ -1.9
TDP1-217ENST00000557782 BCKDKO14874 412 aa3.21□□□□□ -1.9
TDP1-217ENST00000557782 LATO43561 262 aa3.21□□□□□ -1.9
TDP1-217ENST00000557782 PSTPIP1O43586 416 aa3.21□□□□□ -1.9
TDP1-217ENST00000557782 IGHG4P01861 327 aa3.21□□□□□ -1.9
TDP1-217ENST00000557782 RNH1P13489 461 aaKnown RBP3.21□□□□□ -1.9
TDP1-217ENST00000557782 HSD17B1P14061 328 aa3.21□□□□□ -1.9
TDP1-217ENST00000557782 SDC1P18827 310 aa3.21□□□□□ -1.9
TDP1-217ENST00000557782 KITLGP21583 273 aa3.21□□□□□ -1.9
TDP1-217ENST00000557782 IFNA8P32881 189 aa3.21□□□□□ -1.9
TDP1-217ENST00000557782 MAP3K8P41279 467 aa3.21□□□□□ -1.9
TDP1-217ENST00000557782 MAGEA9P43362 315 aa3.21□□□□□ -1.9
TDP1-217ENST00000557782 QARSP47897 775 aaKnown RBP3.21□□□□□ -1.9
TDP1-217ENST00000557782 CCNG1P51959 295 aa3.21□□□□□ -1.9
TDP1-217ENST00000557782 ART1P52961 327 aa3.21□□□□□ -1.9
TDP1-217ENST00000557782 MAP3K7CLP57077 242 aa3.21□□□□□ -1.9
TDP1-217ENST00000557782 LTBQ06643 244 aa3.21□□□□□ -1.9
TDP1-217ENST00000557782 ILKQ13418 452 aa3.21□□□□□ -1.9
TDP1-217ENST00000557782 KIAA0141Q14154 515 aaPredicted RBP3.21□□□□□ -1.9
TDP1-217ENST00000557782 LAGE3Q14657 143 aa3.21□□□□□ -1.9
TDP1-217ENST00000557782 RBBP5Q15291 538 aaKnown RBP3.21□□□□□ -1.9
TDP1-217ENST00000557782 TEX44Q53QW1 395 aa3.21□□□□□ -1.9
TDP1-217ENST00000557782 C1orf220Q5T0J3 134 aa3.21□□□□□ -1.9
TDP1-217ENST00000557782 METTL11BQ5VVY1 283 aa3.21□□□□□ -1.9
TDP1-217ENST00000557782 PDPK2PQ6A1A2 396 aa3.21□□□□□ -1.9
TDP1-217ENST00000557782 HSDL2Q6YN16 418 aa3.21□□□□□ -1.9
TDP1-217ENST00000557782 ADAMTSL5Q6ZMM2 481 aa3.21□□□□□ -1.9
TDP1-217ENST00000557782 STAC2Q6ZMT1 411 aa3.21□□□□□ -1.9
TDP1-217ENST00000557782 VRK2Q86Y07 508 aa3.21□□□□□ -1.9
TDP1-217ENST00000557782 MMAAQ8IVH4 418 aaKnown RBP3.21□□□□□ -1.9
TDP1-217ENST00000557782 LINC01561Q8N1V8 128 aa3.21□□□□□ -1.9
TDP1-217ENST00000557782 Q8N1X5 172 aa3.21□□□□□ -1.9
TDP1-217ENST00000557782 ZNF781Q8N8C0 355 aa3.21□□□□□ -1.9
TDP1-217ENST00000557782 ATP6V0D2Q8N8Y2 350 aa3.21□□□□□ -1.9
TDP1-217ENST00000557782 ASCC1Q8N9N2 400 aaKnown RBP3.21□□□□□ -1.9
TDP1-217ENST00000557782 KLHDC9Q8NEP7 349 aa3.21□□□□□ -1.9
TDP1-217ENST00000557782 PROKR2Q8NFJ6 384 aa3.21□□□□□ -1.9
TDP1-217ENST00000557782 OR5T3Q8NGG3 340 aa3.21□□□□□ -1.9
TDP1-217ENST00000557782 OR10G7Q8NGN6 311 aa3.21□□□□□ -1.9
TDP1-217ENST00000557782 LRRC20Q8TCA0 184 aa3.21□□□□□ -1.9
TDP1-217ENST00000557782 SPPL2AQ8TCT8 520 aa3.21□□□□□ -1.9
TDP1-217ENST00000557782 DTX3LQ8TDB6 740 aa3.21□□□□□ -1.9
TDP1-217ENST00000557782 GPR151Q8TDV0 419 aa3.21□□□□□ -1.9
TDP1-217ENST00000557782 NEUROG1Q92886 237 aa3.21□□□□□ -1.9
TDP1-217ENST00000557782 PLEKHA8Q96JA3 519 aa3.21□□□□□ -1.9
TDP1-217ENST00000557782 RCHY1Q96PM5 261 aa3.21□□□□□ -1.9
TDP1-217ENST00000557782 CNN2Q99439 309 aaKnown RBP3.21□□□□□ -1.9
TDP1-217ENST00000557782 RIOK1Q9BRS2 568 aaKnown RBP3.21□□□□□ -1.9
TDP1-217ENST00000557782 SLC35A5Q9BS91 424 aa3.21□□□□□ -1.9
TDP1-217ENST00000557782 TMEM204Q9BSN7 226 aa3.21□□□□□ -1.9
TDP1-217ENST00000557782 SLC7A5P2Q9GIP4 190 aa3.21□□□□□ -1.9
TDP1-217ENST00000557782 RNF41Q9H4P4 317 aaPredicted RBP3.21□□□□□ -1.9
TDP1-217ENST00000557782 NIPAL2Q9H841 368 aa3.21□□□□□ -1.9
TDP1-217ENST00000557782 PXMP2Q9NR77 195 aa3.21□□□□□ -1.9
TDP1-217ENST00000557782 NUDT15Q9NV35 164 aa3.21□□□□□ -1.9
TDP1-217ENST00000557782 ANGPTL2Q9UKU9 493 aa3.21□□□□□ -1.9
TDP1-217ENST00000557782 BARX2Q9UMQ3 279 aaPredicted RBP3.21□□□□□ -1.9
TDP1-217ENST00000557782 COPS3Q9UNS2 423 aa3.21□□□□□ -1.9
TDP1-217ENST00000557782 EXOGQ9Y2C4 368 aaKnown RBP3.21□□□□□ -1.9
TDP1-217ENST00000557782 FRMPD3Q5JV73 1810 aa3.21□□□□□ -1.9
TDP1-217ENST00000557782 IQANK1A0A1B0GTG1 560 aa3.2□□□□□ -1.9
TDP1-217ENST00000557782 A0A1W2PPV9 198 aa3.2□□□□□ -1.9
TDP1-217ENST00000557782 BCLAF3A2AJT9 711 aaKnown RBP3.2□□□□□ -1.9
TDP1-217ENST00000557782 IGLON5A6NGN9 336 aa3.2□□□□□ -1.9
TDP1-217ENST00000557782 C15orf61A6NNL5 157 aa3.2□□□□□ -1.9
TDP1-217ENST00000557782 A8MXQ7 604 aa3.2□□□□□ -1.9
TDP1-217ENST00000557782 NPIPB9F8W1W9 429 aa3.2□□□□□ -1.9
TDP1-217ENST00000557782 H3BMQ9 156 aa3.2□□□□□ -1.9
TDP1-217ENST00000557782 K7EQD1 137 aa3.2□□□□□ -1.9
TDP1-217ENST00000557782 TYROBPO43914 113 aa3.2□□□□□ -1.9
TDP1-217ENST00000557782 NADKO95544 446 aaPredicted RBP3.2□□□□□ -1.9
TDP1-217ENST00000557782 FGFR1OPO95684 399 aaKnown RBP3.2□□□□□ -1.9
TDP1-217ENST00000557782 MMP1P03956 469 aa3.2□□□□□ -1.9
TDP1-217ENST00000557782 P04436 131 aa3.2□□□□□ -1.9
TDP1-217ENST00000557782 MARK3P27448 753 aa3.2□□□□□ -1.9
TDP1-217ENST00000557782 CD38P28907 300 aa3.2□□□□□ -1.9
TDP1-217ENST00000557782 PRDX3P30048 256 aaKnown RBP3.2□□□□□ -1.9
TDP1-217ENST00000557782 NR4A2P43354 598 aa3.2□□□□□ -1.9
TDP1-217ENST00000557782 SLC8A3P57103 927 aa3.2□□□□□ -1.9
TDP1-217ENST00000557782 DSCR9P59020 149 aa3.2□□□□□ -1.9
TDP1-217ENST00000557782 RND3P61587 244 aa3.2□□□□□ -1.9
TDP1-217ENST00000557782 YWHAEP62258 255 aaKnown RBP3.2□□□□□ -1.9
TDP1-217ENST00000557782 TRDNQ13061 729 aa3.2□□□□□ -1.9
TDP1-217ENST00000557782 PPIL2Q13356 520 aa3.2□□□□□ -1.9
TDP1-217ENST00000557782 ZNF77Q15935 545 aa3.2□□□□□ -1.9
TDP1-217ENST00000557782 MRPL23Q16540 153 aaKnown RBP3.2□□□□□ -1.9
TDP1-217ENST00000557782 UPP1Q16831 310 aa3.2□□□□□ -1.9
TDP1-217ENST00000557782 ACER2Q5QJU3 275 aa3.2□□□□□ -1.9
TDP1-217ENST00000557782 C9orf135Q5VTT2 229 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms