RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 MAPK14Q16539 360 aa10.97□□□□□ -0.65
VIPAS39-211ENST00000557658 HNRNPA1L2Q32P51 320 aaKnown RBP10.97□□□□□ -0.65
VIPAS39-211ENST00000557658 MFSD12Q6NUT3 480 aa10.97□□□□□ -0.65
VIPAS39-211ENST00000557658 RPTNQ6XPR3 784 aa10.97□□□□□ -0.65
VIPAS39-211ENST00000557658 SLITRK4Q8IW52 837 aa10.97□□□□□ -0.65
VIPAS39-211ENST00000557658 CDK20Q8IZL9 346 aa10.97□□□□□ -0.65
VIPAS39-211ENST00000557658 BMPERQ8N8U9 685 aa10.97□□□□□ -0.65
VIPAS39-211ENST00000557658 SLC16A11Q8NCK7 471 aa10.97□□□□□ -0.65
VIPAS39-211ENST00000557658 PCNPQ8WW12 178 aaKnown RBP10.97□□□□□ -0.65
VIPAS39-211ENST00000557658 SMPDL3BQ92485 455 aa10.97□□□□□ -0.65
VIPAS39-211ENST00000557658 GHSRQ92847 366 aa10.97□□□□□ -0.65
VIPAS39-211ENST00000557658 MS4A4EQ96PG1 132 aa10.97□□□□□ -0.65
VIPAS39-211ENST00000557658 ENKD1Q9H0I2 346 aa10.97□□□□□ -0.65
VIPAS39-211ENST00000557658 LYARQ9NX58 379 aaKnown RBP10.97□□□□□ -0.65
VIPAS39-211ENST00000557658 CDK2AP1O14519 115 aa10.96□□□□□ -0.65
VIPAS39-211ENST00000557658 PEX14O75381 377 aa10.96□□□□□ -0.65
VIPAS39-211ENST00000557658 WNT1P04628 370 aa10.96□□□□□ -0.65
VIPAS39-211ENST00000557658 RHOP08100 348 aa10.96□□□□□ -0.65
VIPAS39-211ENST00000557658 ANKRD34CP0C6C1 535 aa10.96□□□□□ -0.65
VIPAS39-211ENST00000557658 EPXP11678 715 aa10.96□□□□□ -0.65
VIPAS39-211ENST00000557658 ADH5P11766 374 aa10.96□□□□□ -0.65
VIPAS39-211ENST00000557658 C4BPBP20851 252 aa10.96□□□□□ -0.65
VIPAS39-211ENST00000557658 PYCR1P32322 319 aa10.96□□□□□ -0.65
VIPAS39-211ENST00000557658 PTGS2P35354 604 aa10.96□□□□□ -0.65
VIPAS39-211ENST00000557658 ZNF136P52737 540 aa10.96□□□□□ -0.65
VIPAS39-211ENST00000557658 EPHA4P54764 986 aa10.96□□□□□ -0.65
VIPAS39-211ENST00000557658 ACTC1P68032 377 aa10.96□□□□□ -0.65
VIPAS39-211ENST00000557658 ACTA1P68133 377 aa10.96□□□□□ -0.65
VIPAS39-211ENST00000557658 POU6F2P78424 691 aaPredicted RBP10.96□□□□□ -0.65
VIPAS39-211ENST00000557658 DEFB103AP81534 67 aa10.96□□□□□ -0.65
VIPAS39-211ENST00000557658 CRYZQ08257 329 aaKnown RBP10.96□□□□□ -0.65
VIPAS39-211ENST00000557658 ELAVL3Q14576 367 aaKnown RBP10.96□□□□□ -0.65
VIPAS39-211ENST00000557658 ASPGQ86U10 573 aa10.96□□□□□ -0.65
VIPAS39-211ENST00000557658 ADGRG3Q86Y34 549 aa10.96□□□□□ -0.65
VIPAS39-211ENST00000557658 NRROSQ86YC3 692 aa10.96□□□□□ -0.65
VIPAS39-211ENST00000557658 FTMTQ8N4E7 242 aa10.96□□□□□ -0.65
VIPAS39-211ENST00000557658 OR51Q1Q8NH59 317 aa10.96□□□□□ -0.65
VIPAS39-211ENST00000557658 PFN4Q8NHR9 129 aa10.96□□□□□ -0.65
VIPAS39-211ENST00000557658 TMEM239Q8WW34 195 aa10.96□□□□□ -0.65
VIPAS39-211ENST00000557658 NXPE3Q969Y0 559 aa10.96□□□□□ -0.65
VIPAS39-211ENST00000557658 INSM2Q96T92 566 aaPredicted RBP10.96□□□□□ -0.65
VIPAS39-211ENST00000557658 LGR4Q9BXB1 951 aa10.96□□□□□ -0.65
VIPAS39-211ENST00000557658 GSX2Q9BZM3 304 aa10.96□□□□□ -0.65
VIPAS39-211ENST00000557658 C20orf85Q9H1P6 137 aa10.96□□□□□ -0.65
VIPAS39-211ENST00000557658 ADGRL4Q9HBW9 690 aa10.96□□□□□ -0.65
VIPAS39-211ENST00000557658 PCDH10Q9P2E7 1040 aa10.96□□□□□ -0.65
VIPAS39-211ENST00000557658 TBC1D3KA0A087X1G2 549 aa10.96□□□□□ -0.66
VIPAS39-211ENST00000557658 A0A1W2PRG6 482 aa10.96□□□□□ -0.66
VIPAS39-211ENST00000557658 TBC1D3BA6NDS4 549 aa10.96□□□□□ -0.66
VIPAS39-211ENST00000557658 TBC1D3FA6NER0 549 aaPredicted RBP10.96□□□□□ -0.66
VIPAS39-211ENST00000557658 TUBAL3A6NHL2 446 aa10.96□□□□□ -0.66
VIPAS39-211ENST00000557658 RIIAD1A6NNX1 92 aa10.96□□□□□ -0.66
VIPAS39-211ENST00000557658 PRAF2O60831 178 aa10.96□□□□□ -0.66
VIPAS39-211ENST00000557658 ARL6IP5O75915 188 aa10.96□□□□□ -0.66
VIPAS39-211ENST00000557658 CLTBP09497 229 aa10.96□□□□□ -0.66
VIPAS39-211ENST00000557658 DRD5P21918 477 aa10.96□□□□□ -0.66
VIPAS39-211ENST00000557658 TSFMP43897 325 aaKnown RBP10.96□□□□□ -0.66
VIPAS39-211ENST00000557658 SOX9P48436 509 aa10.96□□□□□ -0.66
VIPAS39-211ENST00000557658 CLDN2P57739 230 aa10.96□□□□□ -0.66
VIPAS39-211ENST00000557658 ZP1P60852 638 aa10.96□□□□□ -0.66
VIPAS39-211ENST00000557658 FAM69AQ5T7M9 428 aa10.96□□□□□ -0.66
VIPAS39-211ENST00000557658 TBC1D3GQ6DHY5 549 aa10.96□□□□□ -0.66
VIPAS39-211ENST00000557658 NLRC3Q7RTR2 1065 aa10.96□□□□□ -0.66
VIPAS39-211ENST00000557658 C12orf40Q86WS4 652 aa10.96□□□□□ -0.66
VIPAS39-211ENST00000557658 HDDC3Q8N4P3 179 aa10.96□□□□□ -0.66
VIPAS39-211ENST00000557658 GALNT11Q8NCW6 608 aa10.96□□□□□ -0.66
VIPAS39-211ENST00000557658 OR4D9Q8NGE8 314 aa10.96□□□□□ -0.66
VIPAS39-211ENST00000557658 OR13C5Q8NGS8 318 aa10.96□□□□□ -0.66
VIPAS39-211ENST00000557658 OR2L8Q8NGY9 312 aa10.96□□□□□ -0.66
VIPAS39-211ENST00000557658 SMIM4Q8WVI0 70 aa10.96□□□□□ -0.66
VIPAS39-211ENST00000557658 RAB11FIP5Q9BXF6 653 aa10.96□□□□□ -0.66
VIPAS39-211ENST00000557658 METTL17Q9H7H0 456 aaPredicted RBP10.96□□□□□ -0.66
VIPAS39-211ENST00000557658 BEX1Q9HBH7 125 aa10.96□□□□□ -0.66
VIPAS39-211ENST00000557658 NKIRAS2Q9NYR9 191 aa10.96□□□□□ -0.66
VIPAS39-211ENST00000557658 RABL2AQ9UBK7 228 aaPredicted RBP10.96□□□□□ -0.66
VIPAS39-211ENST00000557658 RPS6KB2Q9UBS0 482 aa10.96□□□□□ -0.66
VIPAS39-211ENST00000557658 SPATA2Q9UM82 520 aa10.96□□□□□ -0.66
VIPAS39-211ENST00000557658 RABL2BQ9UNT1 228 aa10.96□□□□□ -0.66
VIPAS39-211ENST00000557658 SLC35A3Q9Y2D2 325 aa10.96□□□□□ -0.66
VIPAS39-211ENST00000557658 HCFC2Q9Y5Z7 792 aa10.96□□□□□ -0.66
VIPAS39-211ENST00000557658 A0A0B4J203 849 aa10.95□□□□□ -0.66
VIPAS39-211ENST00000557658 ITGA10O75578 1167 aa10.95□□□□□ -0.66
VIPAS39-211ENST00000557658 CFDP00746 253 aaPredicted RBP10.95□□□□□ -0.66
VIPAS39-211ENST00000557658 HPXP02790 462 aa10.95□□□□□ -0.66
VIPAS39-211ENST00000557658 THBS1P07996 1170 aa10.95□□□□□ -0.66
VIPAS39-211ENST00000557658 HOXB3P14651 431 aaPredicted RBP10.95□□□□□ -0.66
VIPAS39-211ENST00000557658 GDNFP39905 211 aa10.95□□□□□ -0.66
VIPAS39-211ENST00000557658 BLVRAP53004 296 aa10.95□□□□□ -0.66
VIPAS39-211ENST00000557658 EEF1A1P68104 462 aaKnown RBP10.95□□□□□ -0.66
VIPAS39-211ENST00000557658 DUSP8Q13202 625 aa10.95□□□□□ -0.66
VIPAS39-211ENST00000557658 MLF2Q15773 248 aaPredicted RBP10.95□□□□□ -0.66
VIPAS39-211ENST00000557658 ARHGAP11BQ3KRB8 267 aa10.95□□□□□ -0.66
VIPAS39-211ENST00000557658 PXDC1Q5TGL8 231 aa10.95□□□□□ -0.66
VIPAS39-211ENST00000557658 GARNL3Q5VVW2 1013 aa10.95□□□□□ -0.66
VIPAS39-211ENST00000557658 FAM111BQ6SJ93 734 aa10.95□□□□□ -0.66
VIPAS39-211ENST00000557658 ESPNLQ6ZVH7 1005 aa10.95□□□□□ -0.66
VIPAS39-211ENST00000557658 ZNF527Q8NB42 609 aa10.95□□□□□ -0.66
VIPAS39-211ENST00000557658 OR5J2Q8NH18 312 aa10.95□□□□□ -0.66
VIPAS39-211ENST00000557658 ZNF671Q8TAW3 534 aa10.95□□□□□ -0.66
VIPAS39-211ENST00000557658 SLC2A12Q8TD20 617 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms