RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 TMEM156Q8N614 296 aa13.22□□□□□ -0.29
ARHGEF40-208ENST00000557498 ZNF555Q8NEP9 628 aa13.22□□□□□ -0.29
ARHGEF40-208ENST00000557498 OR5W2Q8NH69 310 aa13.22□□□□□ -0.29
ARHGEF40-208ENST00000557498 B4GALNT2Q8NHY0 566 aa13.22□□□□□ -0.29
ARHGEF40-208ENST00000557498 PIGXQ8TBF5 258 aa13.22□□□□□ -0.29
ARHGEF40-208ENST00000557498 TMEM255BQ8WV15 326 aa13.22□□□□□ -0.29
ARHGEF40-208ENST00000557498 THAP4Q8WY91 577 aa13.22□□□□□ -0.29
ARHGEF40-208ENST00000557498 GTPBP3Q969Y2 492 aaKnown RBP13.22□□□□□ -0.29
ARHGEF40-208ENST00000557498 MPP4Q96JB8 637 aa13.22□□□□□ -0.29
ARHGEF40-208ENST00000557498 GABARAPL3Q9BY60 117 aa13.22□□□□□ -0.29
ARHGEF40-208ENST00000557498 ANKRD60Q9BZ19 345 aa13.22□□□□□ -0.29
ARHGEF40-208ENST00000557498 RIBC2Q9H4K1 309 aa13.22□□□□□ -0.29
ARHGEF40-208ENST00000557498 HPF1Q9NWY4 346 aa13.22□□□□□ -0.29
ARHGEF40-208ENST00000557498 SELENONQ9NZV5 590 aa13.22□□□□□ -0.29
ARHGEF40-208ENST00000557498 CHCHD2Q9Y6H1 151 aaPredicted RBP13.22□□□□□ -0.29
ARHGEF40-208ENST00000557498 FRYLO94915 3013 aa13.21□□□□□ -0.29
ARHGEF40-208ENST00000557498 ITGA3P26006 1051 aa13.21□□□□□ -0.29
ARHGEF40-208ENST00000557498 RBM34P42696 430 aaKnown RBP13.21□□□□□ -0.29
ARHGEF40-208ENST00000557498 ST13P50502 369 aaKnown RBP13.21□□□□□ -0.29
ARHGEF40-208ENST00000557498 SUMO3P55854 103 aaPredicted RBP13.21□□□□□ -0.29
ARHGEF40-208ENST00000557498 LSM11P83369 360 aaKnown RBP eCLIP13.21□□□□□ -0.29
ARHGEF40-208ENST00000557498 MED21Q13503 144 aa13.21□□□□□ -0.29
ARHGEF40-208ENST00000557498 CBFBQ13951 182 aa13.21□□□□□ -0.29
ARHGEF40-208ENST00000557498 COL28A1Q2UY09 1125 aa13.21□□□□□ -0.29
ARHGEF40-208ENST00000557498 ACER2Q5QJU3 275 aa13.21□□□□□ -0.29
ARHGEF40-208ENST00000557498 BICRALQ6AI39 1079 aa13.21□□□□□ -0.29
ARHGEF40-208ENST00000557498 C1orf94Q6P1W5 598 aa13.21□□□□□ -0.29
ARHGEF40-208ENST00000557498 RTL4Q6ZR62 310 aa13.21□□□□□ -0.29
ARHGEF40-208ENST00000557498 RRM2BQ7LG56 351 aa13.21□□□□□ -0.29
ARHGEF40-208ENST00000557498 PRICKLE2Q7Z3G6 844 aa13.21□□□□□ -0.29
ARHGEF40-208ENST00000557498 ZER1Q7Z7L7 766 aa13.21□□□□□ -0.29
ARHGEF40-208ENST00000557498 PARP8Q8N3A8 854 aa13.21□□□□□ -0.29
ARHGEF40-208ENST00000557498 MARVELD2Q8N4S9 558 aa13.21□□□□□ -0.29
ARHGEF40-208ENST00000557498 ZNF563Q8TA94 476 aa13.21□□□□□ -0.29
ARHGEF40-208ENST00000557498 RNF217Q8TC41 542 aa13.21□□□□□ -0.29
ARHGEF40-208ENST00000557498 GNPDA2Q8TDQ7 276 aa13.21□□□□□ -0.29
ARHGEF40-208ENST00000557498 DUSP19Q8WTR2 217 aa13.21□□□□□ -0.29
ARHGEF40-208ENST00000557498 DNAJA4Q8WW22 397 aaPredicted RBP13.21□□□□□ -0.29
ARHGEF40-208ENST00000557498 TMEM239Q8WW34 195 aa13.21□□□□□ -0.29
ARHGEF40-208ENST00000557498 C3orf49Q96BT1 292 aa13.21□□□□□ -0.29
ARHGEF40-208ENST00000557498 CNBD2Q96M20 576 aa13.21□□□□□ -0.29
ARHGEF40-208ENST00000557498 HS6ST2Q96MM7 605 aa13.21□□□□□ -0.29
ARHGEF40-208ENST00000557498 CCNL2Q96S94 520 aaPredicted RBP13.21□□□□□ -0.29
ARHGEF40-208ENST00000557498 KLHDC3Q9BQ90 382 aa13.21□□□□□ -0.29
ARHGEF40-208ENST00000557498 UCK2Q9BZX2 261 aa13.21□□□□□ -0.29
ARHGEF40-208ENST00000557498 LHPPQ9H008 270 aa13.21□□□□□ -0.29
ARHGEF40-208ENST00000557498 HHATLQ9HCP6 504 aa13.21□□□□□ -0.29
ARHGEF40-208ENST00000557498 GALNT9Q9HCQ5 603 aa13.21□□□□□ -0.29
ARHGEF40-208ENST00000557498 SH2D2AQ9NP31 389 aa13.21□□□□□ -0.29
ARHGEF40-208ENST00000557498 KRCC1Q9NPI7 259 aaPredicted RBP13.21□□□□□ -0.29
ARHGEF40-208ENST00000557498 SDHAF3Q9NRP4 125 aa13.21□□□□□ -0.29
ARHGEF40-208ENST00000557498 FAM118AQ9NWS6 357 aa13.21□□□□□ -0.29
ARHGEF40-208ENST00000557498 PPP4R1LQ9P1A2 415 aa13.21□□□□□ -0.29
ARHGEF40-208ENST00000557498 ENOPH1Q9UHY7 261 aa13.21□□□□□ -0.29
ARHGEF40-208ENST00000557498 WIF1Q9Y5W5 379 aa13.21□□□□□ -0.29
ARHGEF40-208ENST00000557498 SPEGQ15772 3267 aa13.21□□□□□ -0.3
ARHGEF40-208ENST00000557498 CUL9Q8IWT3 2517 aa13.2□□□□□ -0.3
ARHGEF40-208ENST00000557498 IGLV3-32A0A0A0MS00 114 aa13.2□□□□□ -0.3
ARHGEF40-208ENST00000557498 ANKUB1A6NFN9 424 aa13.2□□□□□ -0.3
ARHGEF40-208ENST00000557498 GMFGO60234 142 aa13.2□□□□□ -0.3
ARHGEF40-208ENST00000557498 PIP5K1CO60331 668 aa13.2□□□□□ -0.3
ARHGEF40-208ENST00000557498 POU2F1P14859 743 aa13.2□□□□□ -0.3
ARHGEF40-208ENST00000557498 WT1P19544 449 aaPredicted RBP13.2□□□□□ -0.3
ARHGEF40-208ENST00000557498 PGCP20142 388 aa13.2□□□□□ -0.3
ARHGEF40-208ENST00000557498 ITPKBP27987 946 aa13.2□□□□□ -0.3
ARHGEF40-208ENST00000557498 CASP3P42574 277 aa13.2□□□□□ -0.3
ARHGEF40-208ENST00000557498 OMPP47874 163 aa13.2□□□□□ -0.3
ARHGEF40-208ENST00000557498 RRADP55042 308 aa13.2□□□□□ -0.3
ARHGEF40-208ENST00000557498 SNTA1Q13424 505 aa13.2□□□□□ -0.3
ARHGEF40-208ENST00000557498 ZNF468Q5VIY5 522 aaPredicted RBP13.2□□□□□ -0.3
ARHGEF40-208ENST00000557498 TTC23Q5W5X9 447 aa13.2□□□□□ -0.3
ARHGEF40-208ENST00000557498 SLC30A6Q6NXT4 461 aa13.2□□□□□ -0.3
ARHGEF40-208ENST00000557498 KLHL17Q6TDP4 642 aa13.2□□□□□ -0.3
ARHGEF40-208ENST00000557498 USP51Q70EK9 711 aa13.2□□□□□ -0.3
ARHGEF40-208ENST00000557498 RNF113BQ8IZP6 322 aaKnown RBP13.2□□□□□ -0.3
ARHGEF40-208ENST00000557498 BEST3Q8N1M1 668 aa13.2□□□□□ -0.3
ARHGEF40-208ENST00000557498 CLEC1AQ8NC01 280 aa13.2□□□□□ -0.3
ARHGEF40-208ENST00000557498 PAQR8Q8TEZ7 354 aa13.2□□□□□ -0.3
ARHGEF40-208ENST00000557498 ZNF426Q9BUY5 554 aa13.2□□□□□ -0.3
ARHGEF40-208ENST00000557498 SCNM1Q9BWG6 230 aa13.2□□□□□ -0.3
ARHGEF40-208ENST00000557498 GRIP2Q9C0E4 1043 aa13.2□□□□□ -0.3
ARHGEF40-208ENST00000557498 CPNE5Q9HCH3 593 aa13.2□□□□□ -0.3
ARHGEF40-208ENST00000557498 ABI3Q9P2A4 366 aa13.2□□□□□ -0.3
ARHGEF40-208ENST00000557498 TEKT2Q9UIF3 430 aa13.2□□□□□ -0.3
ARHGEF40-208ENST00000557498 WASF3Q9UPY6 502 aa13.2□□□□□ -0.3
ARHGEF40-208ENST00000557498 CPAMD8Q8IZJ3 1885 aa13.2□□□□□ -0.3
ARHGEF40-208ENST00000557498 HEATR5AQ86XA9 2040 aa13.2□□□□□ -0.3
ARHGEF40-208ENST00000557498 GVINP1Q7Z2Y8 2422 aa13.2□□□□□ -0.3
ARHGEF40-208ENST00000557498 A0A087WUJ7 227 aa13.19□□□□□ -0.3
ARHGEF40-208ENST00000557498 C2orf72A6NCS6 295 aa13.19□□□□□ -0.3
ARHGEF40-208ENST00000557498 ARGFXA6NJG6 315 aa13.19□□□□□ -0.3
ARHGEF40-208ENST00000557498 ZNF891A8MT65 544 aaPredicted RBP13.19□□□□□ -0.3
ARHGEF40-208ENST00000557498 E9PQ18 207 aa13.19□□□□□ -0.3
ARHGEF40-208ENST00000557498 BCKDKO14874 412 aa13.19□□□□□ -0.3
ARHGEF40-208ENST00000557498 SLC16A6O15403 523 aa13.19□□□□□ -0.3
ARHGEF40-208ENST00000557498 NKX2-8O15522 239 aa13.19□□□□□ -0.3
ARHGEF40-208ENST00000557498 NUDT14O95848 222 aa13.19□□□□□ -0.3
ARHGEF40-208ENST00000557498 CCL3P10147 92 aa13.19□□□□□ -0.3
ARHGEF40-208ENST00000557498 GP1BBP13224 206 aa13.19□□□□□ -0.3
ARHGEF40-208ENST00000557498 SPINK2P20155 84 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms