RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 TMEM106CQ9BVX2 250 aa16.4■□□□□ 0.22
XRCC3-218ENST00000557439 PBX4Q9BYU1 374 aa16.4■□□□□ 0.22
XRCC3-218ENST00000557439 KLHL1Q9NR64 748 aa16.4■□□□□ 0.22
XRCC3-218ENST00000557439 OBP2AQ9NY56 170 aa16.4■□□□□ 0.22
XRCC3-218ENST00000557439 NTMQ9P121 344 aa16.4■□□□□ 0.22
XRCC3-218ENST00000557439 PHF11Q9UIL8 331 aa16.4■□□□□ 0.22
XRCC3-218ENST00000557439 C19orf53Q9UNZ5 99 aaPredicted RBP16.4■□□□□ 0.22
XRCC3-218ENST00000557439 RASD1Q9Y272 281 aa16.4■□□□□ 0.22
XRCC3-218ENST00000557439 HEBP2Q9Y5Z4 205 aa16.4■□□□□ 0.22
XRCC3-218ENST00000557439 CDHR4A6H8M9 788 aa16.4■□□□□ 0.22
XRCC3-218ENST00000557439 EPOPA6NHQ4 379 aa16.4■□□□□ 0.22
XRCC3-218ENST00000557439 LRRN3E7EW58 273 aa16.4■□□□□ 0.22
XRCC3-218ENST00000557439 PLOD3O60568 738 aa16.4■□□□□ 0.22
XRCC3-218ENST00000557439 HCN1O60741 890 aa16.4■□□□□ 0.22
XRCC3-218ENST00000557439 KLF8O95600 359 aaPredicted RBP16.4■□□□□ 0.22
XRCC3-218ENST00000557439 NID1P14543 1247 aa16.4■□□□□ 0.22
XRCC3-218ENST00000557439 EN2P19622 333 aaPredicted RBP16.4■□□□□ 0.22
XRCC3-218ENST00000557439 TLX1P31314 330 aaPredicted RBP16.4■□□□□ 0.22
XRCC3-218ENST00000557439 EFR3AQ14156 821 aa16.4■□□□□ 0.22
XRCC3-218ENST00000557439 SLC25A35Q3KQZ1 300 aa16.4■□□□□ 0.22
XRCC3-218ENST00000557439 USP53Q70EK8 1073 aa16.4■□□□□ 0.22
XRCC3-218ENST00000557439 SAMD12Q8N8I0 201 aa16.4■□□□□ 0.22
XRCC3-218ENST00000557439 BRIX1Q8TDN6 353 aaKnown RBP16.4■□□□□ 0.22
XRCC3-218ENST00000557439 SCARF2Q96GP6 870 aaPredicted RBP16.4■□□□□ 0.22
XRCC3-218ENST00000557439 TEAD3Q99594 435 aa16.4■□□□□ 0.22
XRCC3-218ENST00000557439 TCEAL2Q9H3H9 227 aaPredicted RBP16.4■□□□□ 0.22
XRCC3-218ENST00000557439 LRRN3Q9H3W5 708 aa16.4■□□□□ 0.22
XRCC3-218ENST00000557439 ASB6Q9NWX5 421 aa16.4■□□□□ 0.22
XRCC3-218ENST00000557439 ACTR10Q9NZ32 417 aa16.4■□□□□ 0.22
XRCC3-218ENST00000557439 PILRAQ9UKJ1 303 aa16.4■□□□□ 0.22
XRCC3-218ENST00000557439 ANKRD34BA5PLL1 514 aa16.39■□□□□ 0.22
XRCC3-218ENST00000557439 SGK494L7N484 410 aa16.39■□□□□ 0.22
XRCC3-218ENST00000557439 IMPA2O14732 288 aa16.39■□□□□ 0.22
XRCC3-218ENST00000557439 CPNE3O75131 537 aaKnown RBP16.39■□□□□ 0.22
XRCC3-218ENST00000557439 NGFRP08138 427 aa16.39■□□□□ 0.22
XRCC3-218ENST00000557439 NTSR1P30989 418 aa16.39■□□□□ 0.22
XRCC3-218ENST00000557439 SRP9P49458 86 aaKnown RBP16.39■□□□□ 0.22
XRCC3-218ENST00000557439 NNATQ16517 81 aa16.39■□□□□ 0.22
XRCC3-218ENST00000557439 GXYLT1Q4G148 440 aa16.39■□□□□ 0.22
XRCC3-218ENST00000557439 ANKRD54Q6NXT1 300 aa16.39■□□□□ 0.22
XRCC3-218ENST00000557439 OR5J2Q8NH18 312 aa16.39■□□□□ 0.22
XRCC3-218ENST00000557439 TNFRSF13CQ96RJ3 184 aa16.39■□□□□ 0.22
XRCC3-218ENST00000557439 ENAMQ9NRM1 1142 aa16.39■□□□□ 0.22
XRCC3-218ENST00000557439 MCUBQ9NWR8 336 aa16.39■□□□□ 0.22
XRCC3-218ENST00000557439 PRR23D1E9PI22 279 aaPredicted RBP16.39■□□□□ 0.21
XRCC3-218ENST00000557439 PRKNO60260 465 aaPredicted RBP16.39■□□□□ 0.21
XRCC3-218ENST00000557439 EGFP01133 1207 aa16.39■□□□□ 0.21
XRCC3-218ENST00000557439 HLA-DQB1P01920 261 aa16.39■□□□□ 0.21
XRCC3-218ENST00000557439 CELA2BP08218 269 aaPredicted RBP16.39■□□□□ 0.21
XRCC3-218ENST00000557439 PRR23D2P0DMB1 279 aaPredicted RBP16.39■□□□□ 0.21
XRCC3-218ENST00000557439 PRKAR1AP10644 381 aa16.39■□□□□ 0.21
XRCC3-218ENST00000557439 EMDP50402 254 aa16.39■□□□□ 0.21
XRCC3-218ENST00000557439 ARFIP1P53367 373 aa16.39■□□□□ 0.21
XRCC3-218ENST00000557439 ACSM1Q08AH1 577 aa16.39■□□□□ 0.21
XRCC3-218ENST00000557439 TRILQ7L0X0 811 aa16.39■□□□□ 0.21
XRCC3-218ENST00000557439 CEACAM19Q7Z692 300 aa16.39■□□□□ 0.21
XRCC3-218ENST00000557439 DNAJC5GQ8N7S2 189 aa16.39■□□□□ 0.21
XRCC3-218ENST00000557439 C1QTNF7Q9BXJ2 289 aa16.39■□□□□ 0.21
XRCC3-218ENST00000557439 FLRT3Q9NZU0 649 aa16.39■□□□□ 0.21
XRCC3-218ENST00000557439 POLHQ9Y253 713 aa16.39■□□□□ 0.21
XRCC3-218ENST00000557439 SIGLEC7Q9Y286 467 aa16.39■□□□□ 0.21
XRCC3-218ENST00000557439 A0A1W2PRG6 482 aa16.38■□□□□ 0.21
XRCC3-218ENST00000557439 HRKO00198 91 aa16.38■□□□□ 0.21
XRCC3-218ENST00000557439 AKR7A2O43488 359 aa16.38■□□□□ 0.21
XRCC3-218ENST00000557439 CDC123O75794 336 aaPredicted RBP16.38■□□□□ 0.21
XRCC3-218ENST00000557439 NDUFA5Q16718 116 aa16.38■□□□□ 0.21
XRCC3-218ENST00000557439 NDUFAF6Q330K2 333 aa16.38■□□□□ 0.21
XRCC3-218ENST00000557439 C1QTNF12Q5T7M4 302 aa16.38■□□□□ 0.21
XRCC3-218ENST00000557439 MTFR2Q6P444 385 aa16.38■□□□□ 0.21
XRCC3-218ENST00000557439 NUDT18Q6ZVK8 323 aa16.38■□□□□ 0.21
XRCC3-218ENST00000557439 GID4Q8IVV7 300 aa16.38■□□□□ 0.21
XRCC3-218ENST00000557439 LNX2Q8N448 690 aa16.38■□□□□ 0.21
XRCC3-218ENST00000557439 GAS2L1Q99501 681 aaPredicted RBP16.38■□□□□ 0.21
XRCC3-218ENST00000557439 NDEL1Q9GZM8 345 aa16.38■□□□□ 0.21
XRCC3-218ENST00000557439 FN3KQ9H479 309 aa16.38■□□□□ 0.21
XRCC3-218ENST00000557439 WSB2Q9NYS7 404 aaPredicted RBP16.38■□□□□ 0.21
XRCC3-218ENST00000557439 CACNA1IQ9P0X4 2223 aa16.38■□□□□ 0.21
XRCC3-218ENST00000557439 TICRRQ7Z2Z1 1910 aa16.38■□□□□ 0.21
XRCC3-218ENST00000557439 DBIP07108 87 aaKnown RBP16.38■□□□□ 0.21
XRCC3-218ENST00000557439 EVI2BP34910 448 aa16.38■□□□□ 0.21
XRCC3-218ENST00000557439 MLLT3P42568 568 aaPredicted RBP16.38■□□□□ 0.21
XRCC3-218ENST00000557439 ZNF85Q03923 595 aa16.38■□□□□ 0.21
XRCC3-218ENST00000557439 EIPR1Q53HC9 387 aa16.38■□□□□ 0.21
XRCC3-218ENST00000557439 MZT2AQ6P582 158 aa16.38■□□□□ 0.21
XRCC3-218ENST00000557439 KIAA1324Q6UXG2 1013 aaKnown RBP16.38■□□□□ 0.21
XRCC3-218ENST00000557439 ESPNLQ6ZVH7 1005 aa16.38■□□□□ 0.21
XRCC3-218ENST00000557439 ORAI1Q96D31 301 aa16.38■□□□□ 0.21
XRCC3-218ENST00000557439 SIPA1Q96FS4 1042 aa16.38■□□□□ 0.21
XRCC3-218ENST00000557439 PCDHGB7Q9Y5F8 929 aa16.38■□□□□ 0.21
XRCC3-218ENST00000557439 YES1P07947 543 aa16.37■□□□□ 0.21
XRCC3-218ENST00000557439 RPS4Y1P22090 263 aaKnown RBP16.37■□□□□ 0.21
XRCC3-218ENST00000557439 PYCR1P32322 319 aa16.37■□□□□ 0.21
XRCC3-218ENST00000557439 THBS2P35442 1172 aa16.37■□□□□ 0.21
XRCC3-218ENST00000557439 FAM53BQ14153 422 aa16.37■□□□□ 0.21
XRCC3-218ENST00000557439 GALEQ14376 348 aa16.37■□□□□ 0.21
XRCC3-218ENST00000557439 NFATC4Q14934 902 aa16.37■□□□□ 0.21
XRCC3-218ENST00000557439 TMEM44Q2T9K0 475 aa16.37■□□□□ 0.21
XRCC3-218ENST00000557439 PRICKLE4Q2TBC4 344 aa16.37■□□□□ 0.21
XRCC3-218ENST00000557439 FBXO46Q6PJ61 603 aaPredicted RBP16.37■□□□□ 0.21
XRCC3-218ENST00000557439 GPR135Q8IZ08 494 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms