RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 OR8K3Q8NH51 312 aa7.84□□□□□ -1.15
CHD8-213ENST00000557364 PSMF1Q92530 271 aa7.84□□□□□ -1.15
CHD8-213ENST00000557364 TMEM168Q9H0V1 697 aa7.84□□□□□ -1.15
CHD8-213ENST00000557364 FOLH1BQ9HBA9 442 aa7.84□□□□□ -1.15
CHD8-213ENST00000557364 LINC01387J3KSC0 135 aa7.84□□□□□ -1.16
CHD8-213ENST00000557364 CRTAPO75718 401 aaPredicted RBP7.84□□□□□ -1.16
CHD8-213ENST00000557364 SEC14L2O76054 403 aa7.84□□□□□ -1.16
CHD8-213ENST00000557364 RPS17P08708 135 aaKnown RBP7.84□□□□□ -1.16
CHD8-213ENST00000557364 PRSS3P35030 304 aa7.84□□□□□ -1.16
CHD8-213ENST00000557364 GPR3P46089 330 aa7.84□□□□□ -1.16
CHD8-213ENST00000557364 CARD18P57730 90 aa7.84□□□□□ -1.16
CHD8-213ENST00000557364 ERVPABLB-1P60509 514 aa7.84□□□□□ -1.16
CHD8-213ENST00000557364 TBC1D28Q2M2D7 210 aa7.84□□□□□ -1.16
CHD8-213ENST00000557364 FAM180BQ6P0A1 224 aa7.84□□□□□ -1.16
CHD8-213ENST00000557364 KLHDC8BQ8IXV7 354 aa7.84□□□□□ -1.16
CHD8-213ENST00000557364 ABHD11Q8NFV4 315 aa7.84□□□□□ -1.16
CHD8-213ENST00000557364 CNOT9Q92600 299 aaKnown RBP7.84□□□□□ -1.16
CHD8-213ENST00000557364 CORO2AQ92828 525 aa7.84□□□□□ -1.16
CHD8-213ENST00000557364 ASB16Q96NS5 453 aa7.84□□□□□ -1.16
CHD8-213ENST00000557364 OR5B12Q96R08 314 aa7.84□□□□□ -1.16
CHD8-213ENST00000557364 BOCQ9BWV1 1114 aa7.84□□□□□ -1.16
CHD8-213ENST00000557364 MAB21L2Q9Y586 359 aa7.84□□□□□ -1.16
CHD8-213ENST00000557364 LPCAT3Q6P1A2 487 aa7.83□□□□□ -1.16
CHD8-213ENST00000557364 AAED1Q7RTV5 226 aa7.83□□□□□ -1.16
CHD8-213ENST00000557364 LILRB2Q8N423 598 aa7.83□□□□□ -1.16
CHD8-213ENST00000557364 CASTOR1Q8WTX7 329 aa7.83□□□□□ -1.16
CHD8-213ENST00000557364 SORCS2Q96PQ0 1159 aa7.83□□□□□ -1.16
CHD8-213ENST00000557364 PKP2Q99959 881 aa7.83□□□□□ -1.16
CHD8-213ENST00000557364 ZNF226Q9NYT6 803 aa7.83□□□□□ -1.16
CHD8-213ENST00000557364 NME7Q9Y5B8 376 aa7.83□□□□□ -1.16
CHD8-213ENST00000557364 DIRAS1O95057 198 aa7.83□□□□□ -1.16
CHD8-213ENST00000557364 SCAF4O95104 1147 aaKnown RBP7.83□□□□□ -1.16
CHD8-213ENST00000557364 MT-ATP6P00846 226 aa7.83□□□□□ -1.16
CHD8-213ENST00000557364 SLC35E2P0CK97 266 aa7.83□□□□□ -1.16
CHD8-213ENST00000557364 ATF4P18848 351 aaPredicted RBP7.83□□□□□ -1.16
CHD8-213ENST00000557364 GGT5P36269 586 aa7.83□□□□□ -1.16
CHD8-213ENST00000557364 THBS3P49746 956 aa7.83□□□□□ -1.16
CHD8-213ENST00000557364 GPR50Q13585 617 aa7.83□□□□□ -1.16
CHD8-213ENST00000557364 PRSS48Q7RTY5 328 aa7.83□□□□□ -1.16
CHD8-213ENST00000557364 ZNF551Q7Z340 670 aaPredicted RBP7.83□□□□□ -1.16
CHD8-213ENST00000557364 NSUN5Q96P11 429 aaKnown RBP7.83□□□□□ -1.16
CHD8-213ENST00000557364 HINT2Q9BX68 163 aa7.83□□□□□ -1.16
CHD8-213ENST00000557364 NT5DC2Q9H857 520 aa7.83□□□□□ -1.16
CHD8-213ENST00000557364 C14orf119Q9NWQ9 140 aa7.83□□□□□ -1.16
CHD8-213ENST00000557364 GLCEO94923 617 aa7.83□□□□□ -1.16
CHD8-213ENST00000557364 PAX7P23759 505 aa7.83□□□□□ -1.16
CHD8-213ENST00000557364 HTR2AP28223 471 aa7.83□□□□□ -1.16
CHD8-213ENST00000557364 DLSTP36957 453 aa7.83□□□□□ -1.16
CHD8-213ENST00000557364 SRPXP78539 464 aa7.83□□□□□ -1.16
CHD8-213ENST00000557364 ADARB1P78563 741 aaKnown RBP7.83□□□□□ -1.16
CHD8-213ENST00000557364 KCNAB2Q13303 367 aa7.83□□□□□ -1.16
CHD8-213ENST00000557364 LIPKQ5VXJ0 399 aa7.83□□□□□ -1.16
CHD8-213ENST00000557364 RBMS3Q6XE24 437 aaKnown RBP7.83□□□□□ -1.16
CHD8-213ENST00000557364 WDR88Q6ZMY6 472 aa7.83□□□□□ -1.16
CHD8-213ENST00000557364 WDR20Q8TBZ3 569 aa7.83□□□□□ -1.16
CHD8-213ENST00000557364 SLC39A13Q96H72 371 aa7.83□□□□□ -1.16
CHD8-213ENST00000557364 C1orf198Q9H425 327 aa7.83□□□□□ -1.16
CHD8-213ENST00000557364 ATPIF1Q9UII2 106 aa7.83□□□□□ -1.16
CHD8-213ENST00000557364 ZNF443Q9Y2A4 671 aaPredicted RBP7.83□□□□□ -1.16
CHD8-213ENST00000557364 LAMA4Q16363 1823 aa7.83□□□□□ -1.16
CHD8-213ENST00000557364 KEAP1Q14145 624 aa7.83□□□□□ -1.16
CHD8-213ENST00000557364 ELAVL1Q15717 326 aaKnown RBP7.83□□□□□ -1.16
CHD8-213ENST00000557364 B3GNT9Q6UX72 402 aa7.83□□□□□ -1.16
CHD8-213ENST00000557364 CSNK2A3Q8NEV1 391 aa7.83□□□□□ -1.16
CHD8-213ENST00000557364 SLC6A18Q96N87 628 aa7.83□□□□□ -1.16
CHD8-213ENST00000557364 TSPAN10Q9H1Z9 355 aaPredicted RBP7.83□□□□□ -1.16
CHD8-213ENST00000557364 TREM1Q9NP99 234 aa7.83□□□□□ -1.16
CHD8-213ENST00000557364 DNAJC15Q9Y5T4 150 aa7.83□□□□□ -1.16
CHD8-213ENST00000557364 SCN7AQ01118 1682 aa7.83□□□□□ -1.16
CHD8-213ENST00000557364 M0R233 179 aa7.83□□□□□ -1.16
CHD8-213ENST00000557364 P2RX6O15547 441 aa7.83□□□□□ -1.16
CHD8-213ENST00000557364 SLC6A11P48066 632 aa7.83□□□□□ -1.16
CHD8-213ENST00000557364 RPL23AP62750 156 aaKnown RBP7.83□□□□□ -1.16
CHD8-213ENST00000557364 TEKQ02763 1124 aa7.83□□□□□ -1.16
CHD8-213ENST00000557364 MPP2Q14168 576 aa7.83□□□□□ -1.16
CHD8-213ENST00000557364 SFT2D3Q587I9 215 aa7.83□□□□□ -1.16
CHD8-213ENST00000557364 IL20RBQ6UXL0 311 aa7.83□□□□□ -1.16
CHD8-213ENST00000557364 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.83□□□□□ -1.16
CHD8-213ENST00000557364 OR2A12Q8NGT7 310 aa7.83□□□□□ -1.16
CHD8-213ENST00000557364 MGLLQ99685 303 aa7.83□□□□□ -1.16
CHD8-213ENST00000557364 SOX17Q9H6I2 414 aaPredicted RBP7.83□□□□□ -1.16
CHD8-213ENST00000557364 TREX1Q9NSU2 369 aa7.83□□□□□ -1.16
CHD8-213ENST00000557364 CACFD1Q9UGQ2 172 aa7.83□□□□□ -1.16
CHD8-213ENST00000557364 CTNSO60931 367 aa7.83□□□□□ -1.16
CHD8-213ENST00000557364 PXNP49023 591 aaPredicted RBP7.83□□□□□ -1.16
CHD8-213ENST00000557364 PLBD1Q6P4A8 553 aa7.83□□□□□ -1.16
CHD8-213ENST00000557364 SMIM15Q7Z3B0 74 aa7.83□□□□□ -1.16
CHD8-213ENST00000557364 NLGN4YQ8NFZ3 816 aaPredicted RBP7.83□□□□□ -1.16
CHD8-213ENST00000557364 GOT1L1Q8NHS2 421 aaPredicted RBP7.83□□□□□ -1.16
CHD8-213ENST00000557364 ZNF480Q8WV37 535 aa7.83□□□□□ -1.16
CHD8-213ENST00000557364 SULT4A1Q9BR01 284 aa7.83□□□□□ -1.16
CHD8-213ENST00000557364 DHRS4Q9BTZ2 278 aa7.83□□□□□ -1.16
CHD8-213ENST00000557364 KCNIP2Q9NS61 270 aa7.83□□□□□ -1.16
CHD8-213ENST00000557364 PITX1P78337 314 aaPredicted RBP7.82□□□□□ -1.16
CHD8-213ENST00000557364 TRA2AQ13595 282 aaKnown RBP eCLIP7.82□□□□□ -1.166e-7■■■■□ 23.9
CHD8-213ENST00000557364 CD300LGQ6UXG3 332 aa7.82□□□□□ -1.16
CHD8-213ENST00000557364 GALNT10Q86SR1 603 aa7.82□□□□□ -1.16
CHD8-213ENST00000557364 KLBQ86Z14 1044 aa7.82□□□□□ -1.16
CHD8-213ENST00000557364 IGDCC3Q8IVU1 814 aa7.82□□□□□ -1.16
CHD8-213ENST00000557364 ASCC1Q8N9N2 400 aaKnown RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms