RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 KCNK2O95069 426 aa7.7□□□□□ -1.18
VRK1-206ENST00000557222 PF4P02776 101 aa7.7□□□□□ -1.18
VRK1-206ENST00000557222 CD3EP07766 207 aa7.7□□□□□ -1.18
VRK1-206ENST00000557222 LINGO3P0C6S8 592 aa7.7□□□□□ -1.18
VRK1-206ENST00000557222 HPGDP15428 266 aa7.7□□□□□ -1.18
VRK1-206ENST00000557222 DDX5P17844 614 aaKnown RBP7.7□□□□□ -1.18
VRK1-206ENST00000557222 FRKP42685 505 aaPredicted RBP7.7□□□□□ -1.18
VRK1-206ENST00000557222 MANFP55145 182 aaKnown RBP7.7□□□□□ -1.18
VRK1-206ENST00000557222 SLC18A2Q05940 514 aa7.7□□□□□ -1.18
VRK1-206ENST00000557222 VEZF1Q14119 521 aa7.7□□□□□ -1.18
VRK1-206ENST00000557222 KIAA0040Q15053 153 aa7.7□□□□□ -1.18
VRK1-206ENST00000557222 ZNF239Q16600 458 aaKnown RBP7.7□□□□□ -1.18
VRK1-206ENST00000557222 WHAMMP3Q1A5X7 153 aa7.7□□□□□ -1.18
VRK1-206ENST00000557222 ZNF672Q499Z4 452 aaPredicted RBP7.7□□□□□ -1.18
VRK1-206ENST00000557222 MFSD12Q6NUT3 480 aa7.7□□□□□ -1.18
VRK1-206ENST00000557222 TFAP2EQ6VUC0 442 aa7.7□□□□□ -1.18
VRK1-206ENST00000557222 SYT10Q6XYQ8 523 aa7.7□□□□□ -1.18
VRK1-206ENST00000557222 DNM1P46Q6ZS02 220 aa7.7□□□□□ -1.18
VRK1-206ENST00000557222 RNF165Q6ZSG1 346 aa7.7□□□□□ -1.18
VRK1-206ENST00000557222 THAP5Q7Z6K1 395 aa7.7□□□□□ -1.18
VRK1-206ENST00000557222 TDRPQ86YL5 185 aa7.7□□□□□ -1.18
VRK1-206ENST00000557222 LILRA2Q8N149 483 aa7.7□□□□□ -1.18
VRK1-206ENST00000557222 NUP43Q8NFH3 380 aa7.7□□□□□ -1.18
VRK1-206ENST00000557222 OR4C3Q8NH37 302 aa7.7□□□□□ -1.18
VRK1-206ENST00000557222 LILRB1Q8NHL6 650 aaPredicted RBP7.7□□□□□ -1.18
VRK1-206ENST00000557222 PIWIL2Q8TC59 973 aaKnown RBP7.7□□□□□ -1.18
VRK1-206ENST00000557222 RNF128Q8TEB7 428 aa7.7□□□□□ -1.18
VRK1-206ENST00000557222 SMAP2Q8WU79 429 aaPredicted RBP7.7□□□□□ -1.18
VRK1-206ENST00000557222 S100PBPQ96BU1 408 aa7.7□□□□□ -1.18
VRK1-206ENST00000557222 RNF145Q96MT1 663 aa7.7□□□□□ -1.18
VRK1-206ENST00000557222 KRTAP9-9Q9BYP9 154 aa7.7□□□□□ -1.18
VRK1-206ENST00000557222 KRTAP9-4Q9BYQ2 154 aa7.7□□□□□ -1.18
VRK1-206ENST00000557222 HOXD1Q9GZZ0 328 aa7.7□□□□□ -1.18
VRK1-206ENST00000557222 GSTO2Q9H4Y5 243 aa7.7□□□□□ -1.18
VRK1-206ENST00000557222 MID1IP1Q9NPA3 183 aa7.7□□□□□ -1.18
VRK1-206ENST00000557222 FBXO34Q9NWN3 711 aa7.7□□□□□ -1.18
VRK1-206ENST00000557222 GIN1Q9NXP7 522 aa7.7□□□□□ -1.18
VRK1-206ENST00000557222 KLHL13Q9P2N7 655 aa7.7□□□□□ -1.18
VRK1-206ENST00000557222 CLEC4AQ9UMR7 237 aa7.7□□□□□ -1.18
VRK1-206ENST00000557222 ALPK2Q86TB3 2170 aa7.7□□□□□ -1.18
VRK1-206ENST00000557222 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.69□□□□□ -1.18
VRK1-206ENST00000557222 SLC28A1O00337 649 aa7.69□□□□□ -1.18
VRK1-206ENST00000557222 SCDO00767 359 aa7.69□□□□□ -1.18
VRK1-206ENST00000557222 UBFD1O14562 309 aaKnown RBP7.69□□□□□ -1.18
VRK1-206ENST00000557222 PRKD3O94806 890 aa7.69□□□□□ -1.18
VRK1-206ENST00000557222 YES1P07947 543 aa7.69□□□□□ -1.18
VRK1-206ENST00000557222 UROSP10746 265 aa7.69□□□□□ -1.18
VRK1-206ENST00000557222 IL32P24001 234 aa7.69□□□□□ -1.18
VRK1-206ENST00000557222 GCAP28676 217 aa7.69□□□□□ -1.18
VRK1-206ENST00000557222 RFX3P48380 749 aa7.69□□□□□ -1.18
VRK1-206ENST00000557222 SUMO3P55854 103 aaPredicted RBP7.69□□□□□ -1.18
VRK1-206ENST00000557222 DNAJB13P59910 316 aa7.69□□□□□ -1.18
VRK1-206ENST00000557222 ZNF844Q08AG5 666 aa7.69□□□□□ -1.18
VRK1-206ENST00000557222 ITGADQ13349 1161 aa7.69□□□□□ -1.18
VRK1-206ENST00000557222 PDE7AQ13946 482 aa7.69□□□□□ -1.18
VRK1-206ENST00000557222 MLC1Q15049 377 aa7.69□□□□□ -1.18
VRK1-206ENST00000557222 NRF1Q16656 503 aa7.69□□□□□ -1.18
VRK1-206ENST00000557222 HMBOX1Q6NT76 420 aa7.69□□□□□ -1.18
VRK1-206ENST00000557222 PPP4R4Q6NUP7 873 aa7.69□□□□□ -1.18
VRK1-206ENST00000557222 TRMT10CQ7L0Y3 403 aaKnown RBP7.69□□□□□ -1.18
VRK1-206ENST00000557222 ZNF551Q7Z340 670 aaPredicted RBP7.69□□□□□ -1.18
VRK1-206ENST00000557222 DTX2Q86UW9 622 aa7.69□□□□□ -1.18
VRK1-206ENST00000557222 P2RY8Q86VZ1 359 aa7.69□□□□□ -1.18
VRK1-206ENST00000557222 B4GALNT2Q8NHY0 566 aa7.69□□□□□ -1.18
VRK1-206ENST00000557222 CDC26Q8NHZ8 85 aa7.69□□□□□ -1.18
VRK1-206ENST00000557222 RAB3IL1Q8TBN0 382 aa7.69□□□□□ -1.18
VRK1-206ENST00000557222 POC1BQ8TC44 478 aa7.69□□□□□ -1.18
VRK1-206ENST00000557222 GATAD2BQ8WXI9 593 aa7.69□□□□□ -1.18
VRK1-206ENST00000557222 IFT81Q8WYA0 676 aa7.69□□□□□ -1.18
VRK1-206ENST00000557222 TMEM158Q8WZ71 300 aa7.69□□□□□ -1.18
VRK1-206ENST00000557222 PIK3R3Q92569 461 aa7.69□□□□□ -1.18
VRK1-206ENST00000557222 KISS1RQ969F8 398 aaPredicted RBP7.69□□□□□ -1.18
VRK1-206ENST00000557222 UBE2FQ969M7 185 aa7.69□□□□□ -1.18
VRK1-206ENST00000557222 ARL8AQ96BM9 186 aa7.69□□□□□ -1.18
VRK1-206ENST00000557222 MTERF3Q96E29 417 aa7.69□□□□□ -1.18
VRK1-206ENST00000557222 GIMAP5Q96F15 307 aa7.69□□□□□ -1.18
VRK1-206ENST00000557222 RADILQ96JH8 1075 aa7.69□□□□□ -1.18
VRK1-206ENST00000557222 RHOVQ96L33 236 aa7.69□□□□□ -1.18
VRK1-206ENST00000557222 FCRL1Q96LA6 429 aa7.69□□□□□ -1.18
VRK1-206ENST00000557222 MS4A4EQ96PG1 132 aa7.69□□□□□ -1.18
VRK1-206ENST00000557222 KCNA7Q96RP8 456 aa7.69□□□□□ -1.18
VRK1-206ENST00000557222 STACQ99469 402 aa7.69□□□□□ -1.18
VRK1-206ENST00000557222 CCT7Q99832 543 aa7.69□□□□□ -1.18
VRK1-206ENST00000557222 RSRP1Q9BUV0 290 aa7.69□□□□□ -1.18
VRK1-206ENST00000557222 POTEKPQ9BYX7 375 aa7.69□□□□□ -1.18
VRK1-206ENST00000557222 SLCO5A1Q9H2Y9 848 aa7.69□□□□□ -1.18
VRK1-206ENST00000557222 REEP4Q9H6H4 257 aa7.69□□□□□ -1.18
VRK1-206ENST00000557222 DUSP22Q9NRW4 184 aa7.69□□□□□ -1.18
VRK1-206ENST00000557222 FAIMQ9NVQ4 179 aa7.69□□□□□ -1.18
VRK1-206ENST00000557222 C1orf109Q9NX04 203 aa7.69□□□□□ -1.18
VRK1-206ENST00000557222 TMED5Q9Y3A6 229 aa7.69□□□□□ -1.18
VRK1-206ENST00000557222 CCL27Q9Y4X3 112 aa7.69□□□□□ -1.18
VRK1-206ENST00000557222 POLR3HQ9Y535 204 aaPredicted RBP7.69□□□□□ -1.18
VRK1-206ENST00000557222 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.68□□□□□ -1.18
VRK1-206ENST00000557222 GOLGA8QA0A0J9YX86 632 aa7.68□□□□□ -1.18
VRK1-206ENST00000557222 A0A1W2PP18 115 aa7.68□□□□□ -1.18
VRK1-206ENST00000557222 GOLGA8OA6NCC3 632 aa7.68□□□□□ -1.18
VRK1-206ENST00000557222 GOLGA8NF8WBI6 632 aa7.68□□□□□ -1.18
VRK1-206ENST00000557222 H3BNH8 94 aa7.68□□□□□ -1.18
VRK1-206ENST00000557222 GOLGA8RI6L899 631 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms