RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, human

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCFD1-223	ENST00000557076	LRP5L	A4QPB2	252 aa		4.11	□□□□□ -1.75
SCFD1-223	ENST00000557076	SDR42E2	A6NKP2	422 aa		4.11	□□□□□ -1.75
SCFD1-223	ENST00000557076		B4DSR2	109 aa		4.11	□□□□□ -1.75
SCFD1-223	ENST00000557076		B4DXG7	233 aa		4.11	□□□□□ -1.75
SCFD1-223	ENST00000557076	ZNF814	B7Z6K7	855 aa		4.11	□□□□□ -1.75
SCFD1-223	ENST00000557076	RTCA	O00442	366 aa	Known RBP	4.11	□□□□□ -1.75
SCFD1-223	ENST00000557076	LIAS	O43766	372 aa		4.11	□□□□□ -1.75
SCFD1-223	ENST00000557076	PGM3	O95394	542 aa		4.11	□□□□□ -1.75
SCFD1-223	ENST00000557076	PTMA	P06454	111 aa	Known RBP	4.11	□□□□□ -1.75
SCFD1-223	ENST00000557076	TUBB	P07437	444 aa		4.11	□□□□□ -1.75
SCFD1-223	ENST00000557076	CT62	P0C5K7	136 aa		4.11	□□□□□ -1.75
SCFD1-223	ENST00000557076	PABPC4L	P0CB38	370 aa	Known RBP	4.11	□□□□□ -1.75
SCFD1-223	ENST00000557076	DHRS4L1	P0CG22	281 aa		4.11	□□□□□ -1.75
SCFD1-223	ENST00000557076	CD22	P20273	847 aa		4.11	□□□□□ -1.75
SCFD1-223	ENST00000557076	GPX3	P22352	226 aa		4.11	□□□□□ -1.75
SCFD1-223	ENST00000557076	ENPP1	P22413	925 aa		4.11	□□□□□ -1.75
SCFD1-223	ENST00000557076	CNTF	P26441	200 aa		4.11	□□□□□ -1.75
SCFD1-223	ENST00000557076	GGT5	P36269	586 aa		4.11	□□□□□ -1.75
SCFD1-223	ENST00000557076	MAGEA1	P43355	309 aa		4.11	□□□□□ -1.75
SCFD1-223	ENST00000557076	PPIC	P45877	212 aa		4.11	□□□□□ -1.75
SCFD1-223	ENST00000557076	CDKN2D	P55273	166 aa		4.11	□□□□□ -1.75
SCFD1-223	ENST00000557076	HNRNPH2	P55795	449 aa	Known RBP	4.11	□□□□□ -1.75
SCFD1-223	ENST00000557076	SRSF4	Q08170	494 aa	Known RBP	4.11	□□□□□ -1.75
SCFD1-223	ENST00000557076	KIF5A	Q12840	1032 aa		4.11	□□□□□ -1.75
SCFD1-223	ENST00000557076	PIN1	Q13526	163 aa	Predicted RBP	4.11	□□□□□ -1.75
SCFD1-223	ENST00000557076	DHX34	Q14147	1143 aa	Known RBP	4.11	□□□□□ -1.75
SCFD1-223	ENST00000557076	SLMAP	Q14BN4	828 aa		4.11	□□□□□ -1.75
SCFD1-223	ENST00000557076	MORF4L2	Q15014	288 aa		4.11	□□□□□ -1.75
SCFD1-223	ENST00000557076	PPA1	Q15181	289 aa		4.11	□□□□□ -1.75
SCFD1-223	ENST00000557076	TSC22D1	Q15714	1073 aa		4.11	□□□□□ -1.75
SCFD1-223	ENST00000557076	TBCC	Q15814	346 aa		4.11	□□□□□ -1.75
SCFD1-223	ENST00000557076	HIST2H2AC	Q16777	129 aa	Predicted RBP	4.11	□□□□□ -1.75
SCFD1-223	ENST00000557076	TMEM44	Q2T9K0	475 aa		4.11	□□□□□ -1.75
SCFD1-223	ENST00000557076	RAET1L	Q5VY80	246 aa		4.11	□□□□□ -1.75
SCFD1-223	ENST00000557076	HIST2H2AA3	Q6FI13	130 aa		4.11	□□□□□ -1.75
SCFD1-223	ENST00000557076	SLC22A25	Q6T423	547 aa		4.11	□□□□□ -1.75
SCFD1-223	ENST00000557076	TFAP2E	Q6VUC0	442 aa		4.11	□□□□□ -1.75
SCFD1-223	ENST00000557076	ZNF788	Q6ZQV5	615 aa		4.11	□□□□□ -1.75
SCFD1-223	ENST00000557076	BHLHA15	Q7RTS1	189 aa	Predicted RBP	4.11	□□□□□ -1.75
SCFD1-223	ENST00000557076	PRR22	Q8IZ63	422 aa		4.11	□□□□□ -1.75
SCFD1-223	ENST00000557076	ZNF619	Q8N2I2	560 aa		4.11	□□□□□ -1.75
SCFD1-223	ENST00000557076	ZCCHC7	Q8N3Z6	543 aa	Known RBP	4.11	□□□□□ -1.75
SCFD1-223	ENST00000557076	C1orf162	Q8NEQ5	155 aa	Predicted RBP	4.11	□□□□□ -1.75
SCFD1-223	ENST00000557076	ZNF473	Q8WTR7	871 aa	Known RBP	4.11	□□□□□ -1.75
SCFD1-223	ENST00000557076	RGMA	Q96B86	450 aa		4.11	□□□□□ -1.75
SCFD1-223	ENST00000557076	WDR34	Q96EX3	536 aa		4.11	□□□□□ -1.75
SCFD1-223	ENST00000557076	LINGO1	Q96FE5	620 aa		4.11	□□□□□ -1.75
SCFD1-223	ENST00000557076	SLC35A4	Q96G79	324 aa		4.11	□□□□□ -1.75
SCFD1-223	ENST00000557076	INPP5K	Q9BT40	448 aa		4.11	□□□□□ -1.75
SCFD1-223	ENST00000557076	SUCNR1	Q9BXA5	334 aa		4.11	□□□□□ -1.75
SCFD1-223	ENST00000557076	BPESC1	Q9GZL8	116 aa		4.11	□□□□□ -1.75
SCFD1-223	ENST00000557076	CDC42EP4	Q9H3Q1	356 aa	Known RBP	4.11	□□□□□ -1.75
SCFD1-223	ENST00000557076	DSN1	Q9H410	356 aa		4.11	□□□□□ -1.75
SCFD1-223	ENST00000557076	MKS1	Q9NXB0	559 aa		4.11	□□□□□ -1.75
SCFD1-223	ENST00000557076	IKZF3	Q9UKT9	509 aa		4.11	□□□□□ -1.75
SCFD1-223	ENST00000557076	MCTS1	Q9ULC4	181 aa	Known RBP	4.11	□□□□□ -1.75
SCFD1-223	ENST00000557076	CLEC4A	Q9UMR7	237 aa		4.11	□□□□□ -1.75
SCFD1-223	ENST00000557076	USP22	Q9UPT9	525 aa		4.11	□□□□□ -1.75
SCFD1-223	ENST00000557076	ASB4	Q9Y574	426 aa		4.11	□□□□□ -1.75
SCFD1-223	ENST00000557076	FKBP7	Q9Y680	259 aa		4.11	□□□□□ -1.75
SCFD1-223	ENST00000557076	BIRC6	Q9NR09	4857 aa		4.11	□□□□□ -1.75
SCFD1-223	ENST00000557076	ARFGEF3	Q5TH69	2177 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	NPIPA5	A0A0B4J1W7	369 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	TCRBV7S2A1N4T	A0A589	114 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	CCDC151	A5D8V7	595 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	CGB1	A6NKQ9	187 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	NPIPA7	E9PJI5	369 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	PGRMC2	O15173	223 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	SEC14L5	O43304	696 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	TSPAN2	O60636	221 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	REM1	O75628	298 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	WDR47	O94967	919 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	SNUPN	O95149	360 aa	Known RBP	4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	SYNGR4	O95473	234 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	STAMBP	O95630	424 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	AHSG	P02765	367 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	YES1	P07947	543 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	ZSCAN5DP	P0CG00	497 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	NPIPA8	P0DM63	369 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	MTHFD2	P13995	350 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	ETS1	P14921	441 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	NT5E	P21589	574 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	PIK3R1	P27986	724 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	GABRB3	P28472	473 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	AGTR1	P30556	359 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	SERPINB1	P30740	379 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	IL2RG	P31785	369 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	SLC1A2	P43004	574 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	KHK	P50053	298 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	ZNF81	P51508	661 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	XK	P51811	444 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	PNLIPRP2	P54317	469 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	PSPH	P78330	225 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	SARNP	P82979	210 aa	Known RBP	4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	TNFRSF17	Q02223	184 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	PLCXD2	Q0VAA5	305 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	MGAT2	Q10469	447 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	EFR3A	Q14156	821 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	E2F2	Q14209	437 aa		4.1	□□□□□ -1.75
SCFD1-223	ENST00000557076	ACAP2	Q15057	778 aa		4.1	□□□□□ -1.75

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