RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 MED17Q9NVC6 651 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 C14orf105Q9NVL8 296 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 ERVK13-1Q9NX77 482 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 SSR3Q9UNL2 185 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 ADAMTS20P59510 1910 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 IGHV1OR21-1A0A087WYE8 117 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 A0A1B0GVT2 93 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 IRGMA1A4Y4 181 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 SNTNA6NMZ2 147 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 A8MU76 341 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 C17orf105B2RV13 164 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 LRRN3E7EW58 273 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 AGRPO00253 132 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 CDRT1O95170 752 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 IGHA1P01876 353 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 HMGN1P05114 100 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 DCNP07585 359 aaKnown RBP9.32□□□□□ -0.92
TMEM260-211ENST00000556648 MRPL3P09001 348 aaKnown RBP9.32□□□□□ -0.92
TMEM260-211ENST00000556648 MSL3P1P0C860 447 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 SPNP16150 400 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 BCAP31P51572 246 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 FOXK2Q01167 660 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 GXYLT1Q4G148 440 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 ALG10BQ5I7T1 473 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 DESI1Q6ICB0 168 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 NIPAL1Q6NVV3 410 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 QSOX2Q6ZRP7 698 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 BMP8AQ7Z5Y6 402 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 CCDC190Q86UF4 302 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 LAPTM4BQ86VI4 370 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 SLC22A16Q86VW1 577 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 GRAMD2AQ8IUY3 354 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 TMEM151BQ8IW70 566 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 SLC35F3Q8IY50 421 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 LNX2Q8N448 690 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 CYB561A3Q8NBI2 242 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 OR1L3Q8NH93 324 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 ADAMTS18Q8TE60 1221 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 TNFRSF13CQ96RJ3 184 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 SECISBP2Q96T21 854 aaKnown RBP9.32□□□□□ -0.92
TMEM260-211ENST00000556648 SDHCQ99643 169 aaPredicted RBP9.32□□□□□ -0.92
TMEM260-211ENST00000556648 ARHGAP9Q9BRR9 750 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 ZNF426Q9BUY5 554 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 NUAK2Q9H093 628 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 TPK1Q9H3S4 243 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 LRRN3Q9H3W5 708 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.32□□□□□ -0.92
TMEM260-211ENST00000556648 CHCHD3Q9NX63 227 aaKnown RBP9.32□□□□□ -0.92
TMEM260-211ENST00000556648 FBXL4Q9UKA2 621 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 OR10H1Q9Y4A9 318 aa9.32□□□□□ -0.92
TMEM260-211ENST00000556648 J3QRE1 110 aa9.31□□□□□ -0.92
TMEM260-211ENST00000556648 K7ESF4 209 aa9.31□□□□□ -0.92
TMEM260-211ENST00000556648 TAF4O00268 1085 aa9.31□□□□□ -0.92
TMEM260-211ENST00000556648 STK25O00506 426 aa9.31□□□□□ -0.92
TMEM260-211ENST00000556648 DVL2O14641 736 aa9.31□□□□□ -0.92
TMEM260-211ENST00000556648 PTP4A3O75365 173 aa9.31□□□□□ -0.92
TMEM260-211ENST00000556648 REM1O75628 298 aa9.31□□□□□ -0.92
TMEM260-211ENST00000556648 OR2B3O76000 313 aa9.31□□□□□ -0.92
TMEM260-211ENST00000556648 HNRNPCP07910 306 aaKnown RBP eCLIP9.31□□□□□ -0.92
TMEM260-211ENST00000556648 GIMD1P0DJR0 217 aa9.31□□□□□ -0.92
TMEM260-211ENST00000556648 FOLR1P15328 257 aa9.31□□□□□ -0.92
TMEM260-211ENST00000556648 ALAS2P22557 587 aa9.31□□□□□ -0.92
TMEM260-211ENST00000556648 S100A5P33763 92 aa9.31□□□□□ -0.92
TMEM260-211ENST00000556648 ATP12AP54707 1039 aa9.31□□□□□ -0.92
TMEM260-211ENST00000556648 CAV3P56539 151 aa9.31□□□□□ -0.92
TMEM260-211ENST00000556648 HSD17B7P56937 341 aa9.31□□□□□ -0.92
TMEM260-211ENST00000556648 FOXL2P58012 376 aa9.31□□□□□ -0.92
TMEM260-211ENST00000556648 SKP1P63208 163 aa9.31□□□□□ -0.92
TMEM260-211ENST00000556648 CRYZQ08257 329 aaKnown RBP9.31□□□□□ -0.92
TMEM260-211ENST00000556648 CD300CQ08708 224 aa9.31□□□□□ -0.92
TMEM260-211ENST00000556648 TPBGQ13641 420 aa9.31□□□□□ -0.92
TMEM260-211ENST00000556648 GRM7Q14831 915 aa9.31□□□□□ -0.92
TMEM260-211ENST00000556648 CD226Q15762 336 aa9.31□□□□□ -0.92
TMEM260-211ENST00000556648 KLHL12Q53G59 568 aa9.31□□□□□ -0.92
TMEM260-211ENST00000556648 ZNF362Q5T0B9 420 aaPredicted RBP9.31□□□□□ -0.92
TMEM260-211ENST00000556648 VASNQ6EMK4 673 aa9.31□□□□□ -0.92
TMEM260-211ENST00000556648 PLEKHG7Q6ZR37 379 aa9.31□□□□□ -0.92
TMEM260-211ENST00000556648 Q7L0L9 218 aa9.31□□□□□ -0.92
TMEM260-211ENST00000556648 LAX1Q8IWV1 398 aa9.31□□□□□ -0.92
TMEM260-211ENST00000556648 PRSS58Q8IYP2 241 aa9.31□□□□□ -0.92
TMEM260-211ENST00000556648 SLC25A45Q8N413 288 aa9.31□□□□□ -0.92
TMEM260-211ENST00000556648 SPEM1Q8N4L4 309 aa9.31□□□□□ -0.92
TMEM260-211ENST00000556648 PTPMT1Q8WUK0 201 aaPredicted RBP9.31□□□□□ -0.92
TMEM260-211ENST00000556648 PMM1Q92871 262 aa9.31□□□□□ -0.92
TMEM260-211ENST00000556648 UFD1Q92890 307 aa9.31□□□□□ -0.92
TMEM260-211ENST00000556648 PTP4A1Q93096 173 aa9.31□□□□□ -0.92
TMEM260-211ENST00000556648 RFKQ969G6 155 aa9.31□□□□□ -0.92
TMEM260-211ENST00000556648 ZNF524Q96C55 264 aa9.31□□□□□ -0.92
TMEM260-211ENST00000556648 AHCYL2Q96HN2 611 aaKnown RBP9.31□□□□□ -0.92
TMEM260-211ENST00000556648 TIMP4Q99727 224 aa9.31□□□□□ -0.92
TMEM260-211ENST00000556648 TEX12Q9BXU0 123 aa9.31□□□□□ -0.92
TMEM260-211ENST00000556648 PCED1AQ9H1Q7 454 aa9.31□□□□□ -0.92
TMEM260-211ENST00000556648 TNFRSF10DQ9UBN6 386 aa9.31□□□□□ -0.92
TMEM260-211ENST00000556648 TMEM5Q9Y2B1 443 aa9.31□□□□□ -0.92
TMEM260-211ENST00000556648 PEX16Q9Y5Y5 336 aa9.31□□□□□ -0.92
TMEM260-211ENST00000556648 TMEM265A0A087WTH1 108 aa9.31□□□□□ -0.92
TMEM260-211ENST00000556648 BLACEA4D250 179 aa9.31□□□□□ -0.92
TMEM260-211ENST00000556648 SERINC4A6NH21 518 aa9.31□□□□□ -0.92
TMEM260-211ENST00000556648 C17orf51A8MQB3 221 aa9.31□□□□□ -0.92
TMEM260-211ENST00000556648 H0YIG0 161 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms