RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 TOR1AIP2Q8NFQ8 470 aa8.71□□□□□ -1.02
SRP54-210ENST00000556380 OR5W2Q8NH69 310 aa8.71□□□□□ -1.02
SRP54-210ENST00000556380 MAL2Q969L2 176 aa8.71□□□□□ -1.02
SRP54-210ENST00000556380 TMEM19Q96HH6 336 aa8.71□□□□□ -1.02
SRP54-210ENST00000556380 TUBA1CQ9BQE3 449 aa8.71□□□□□ -1.02
SRP54-210ENST00000556380 PIGQQ9BRB3 760 aa8.71□□□□□ -1.02
SRP54-210ENST00000556380 CCDC106Q9BWC9 280 aa8.71□□□□□ -1.02
SRP54-210ENST00000556380 RAD21L1Q9H4I0 556 aa8.71□□□□□ -1.02
SRP54-210ENST00000556380 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.71□□□□□ -1.02
SRP54-210ENST00000556380 P2RX2Q9UBL9 471 aa8.71□□□□□ -1.02
SRP54-210ENST00000556380 CAMK2AQ9UQM7 478 aa8.71□□□□□ -1.02
SRP54-210ENST00000556380 CHST2Q9Y4C5 530 aa8.71□□□□□ -1.02
SRP54-210ENST00000556380 CAPN7Q9Y6W3 813 aa8.71□□□□□ -1.02
SRP54-210ENST00000556380 MAST4O15021 2626 aa8.7□□□□□ -1.02
SRP54-210ENST00000556380 A0A0G2JPF8 293 aa8.7□□□□□ -1.02
SRP54-210ENST00000556380 LOC100653049A0A140TA62 436 aa8.7□□□□□ -1.02
SRP54-210ENST00000556380 CD8B2A6NJW9 211 aa8.7□□□□□ -1.02
SRP54-210ENST00000556380 HNRNPCL2B2RXH8 293 aa8.7□□□□□ -1.02
SRP54-210ENST00000556380 HNRNPCL3B7ZW38 293 aa8.7□□□□□ -1.02
SRP54-210ENST00000556380 H0YC42 278 aa8.7□□□□□ -1.02
SRP54-210ENST00000556380 HNRNPCL1O60812 293 aaKnown RBP8.7□□□□□ -1.02
SRP54-210ENST00000556380 CCDC22O60826 627 aa8.7□□□□□ -1.02
SRP54-210ENST00000556380 ADAM11O75078 769 aa8.7□□□□□ -1.02
SRP54-210ENST00000556380 KRT34O76011 436 aa8.7□□□□□ -1.02
SRP54-210ENST00000556380 TOXO94900 526 aa8.7□□□□□ -1.02
SRP54-210ENST00000556380 PGM3O95394 542 aa8.7□□□□□ -1.02
SRP54-210ENST00000556380 DBIP07108 87 aaKnown RBP8.7□□□□□ -1.02
SRP54-210ENST00000556380 HNRNPCL4P0DMR1 293 aa8.7□□□□□ -1.02
SRP54-210ENST00000556380 ARAFP10398 606 aa8.7□□□□□ -1.02
SRP54-210ENST00000556380 PEPDP12955 493 aa8.7□□□□□ -1.02
SRP54-210ENST00000556380 PRKCAP17252 672 aa8.7□□□□□ -1.02
SRP54-210ENST00000556380 IL11P20809 199 aa8.7□□□□□ -1.02
SRP54-210ENST00000556380 ADH6P28332 368 aa8.7□□□□□ -1.02
SRP54-210ENST00000556380 CEACAM8P31997 349 aaPredicted RBP8.7□□□□□ -1.02
SRP54-210ENST00000556380 GZMMP51124 257 aa8.7□□□□□ -1.02
SRP54-210ENST00000556380 SUCLG1P53597 346 aaKnown RBP8.7□□□□□ -1.02
SRP54-210ENST00000556380 TPD52P55327 224 aaPredicted RBP8.7□□□□□ -1.02
SRP54-210ENST00000556380 CLDN20P56880 219 aa8.7□□□□□ -1.02
SRP54-210ENST00000556380 ART3Q13508 389 aa8.7□□□□□ -1.02
SRP54-210ENST00000556380 NFYCQ13952 458 aa8.7□□□□□ -1.02
SRP54-210ENST00000556380 TRMT5Q32P41 509 aaKnown RBP8.7□□□□□ -1.02
SRP54-210ENST00000556380 GCNT6Q5T4J0 391 aa8.7□□□□□ -1.02
SRP54-210ENST00000556380 RAET1LQ5VY80 246 aa8.7□□□□□ -1.02
SRP54-210ENST00000556380 NSUN5P2Q63ZY6 315 aa8.7□□□□□ -1.02
SRP54-210ENST00000556380 NANOGP8Q6NSW7 305 aa8.7□□□□□ -1.02
SRP54-210ENST00000556380 XKRXQ6PP77 449 aa8.7□□□□□ -1.02
SRP54-210ENST00000556380 ENPP6Q6UWR7 440 aa8.7□□□□□ -1.02
SRP54-210ENST00000556380 B3GNT6Q6ZMB0 384 aa8.7□□□□□ -1.02
SRP54-210ENST00000556380 C1orf229Q6ZS94 237 aaPredicted RBP8.7□□□□□ -1.02
SRP54-210ENST00000556380 NET1Q7Z628 596 aaPredicted RBP8.7□□□□□ -1.02
SRP54-210ENST00000556380 MRGPRGQ86SM5 289 aa8.7□□□□□ -1.02
SRP54-210ENST00000556380 MTDHQ86UE4 582 aaKnown RBP8.7□□□□□ -1.02
SRP54-210ENST00000556380 SNX32Q86XE0 403 aa8.7□□□□□ -1.02
SRP54-210ENST00000556380 PTOV1Q86YD1 416 aa8.7□□□□□ -1.02
SRP54-210ENST00000556380 CMIPQ8IY22 773 aa8.7□□□□□ -1.02
SRP54-210ENST00000556380 EID3Q8N140 333 aa8.7□□□□□ -1.02
SRP54-210ENST00000556380 ZNF808Q8N4W9 903 aaPredicted RBP8.7□□□□□ -1.02
SRP54-210ENST00000556380 METTL25Q8N6Q8 603 aa8.7□□□□□ -1.02
SRP54-210ENST00000556380 CNOT9Q92600 299 aaKnown RBP8.7□□□□□ -1.02
SRP54-210ENST00000556380 ZBTB8AQ96BR9 441 aa8.7□□□□□ -1.02
SRP54-210ENST00000556380 ADGRG7Q96K78 797 aa8.7□□□□□ -1.02
SRP54-210ENST00000556380 THUMPD3Q9BV44 507 aaKnown RBP8.7□□□□□ -1.02
SRP54-210ENST00000556380 TRIM8Q9BZR9 551 aa8.7□□□□□ -1.02
SRP54-210ENST00000556380 TMEM38AQ9H6F2 299 aa8.7□□□□□ -1.02
SRP54-210ENST00000556380 KAT8Q9H7Z6 458 aaKnown RBP8.7□□□□□ -1.02
SRP54-210ENST00000556380 NANOGQ9H9S0 305 aa8.7□□□□□ -1.02
SRP54-210ENST00000556380 CALHM2Q9HA72 323 aa8.7□□□□□ -1.02
SRP54-210ENST00000556380 EXOSC3Q9NQT5 275 aaKnown RBP8.7□□□□□ -1.02
SRP54-210ENST00000556380 ALKBH4Q9NXW9 302 aa8.7□□□□□ -1.02
SRP54-210ENST00000556380 CALML5Q9NZT1 146 aa8.7□□□□□ -1.02
SRP54-210ENST00000556380 ARMCX1Q9P291 453 aa8.7□□□□□ -1.02
SRP54-210ENST00000556380 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.7□□□□□ -1.02
SRP54-210ENST00000556380 VDAC3Q9Y277 283 aa8.7□□□□□ -1.02
SRP54-210ENST00000556380 SLC35A3Q9Y2D2 325 aa8.7□□□□□ -1.02
SRP54-210ENST00000556380 AP4B1Q9Y6B7 739 aa8.7□□□□□ -1.02
SRP54-210ENST00000556380 ABCA12Q86UK0 2595 aa8.7□□□□□ -1.02
SRP54-210ENST00000556380 HEATR5AQ86XA9 2040 aa8.7□□□□□ -1.02
SRP54-210ENST00000556380 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.69□□□□□ -1.02
SRP54-210ENST00000556380 A0A0G2JNJ9 132 aa8.69□□□□□ -1.02
SRP54-210ENST00000556380 CDHR4A6H8M9 788 aa8.69□□□□□ -1.02
SRP54-210ENST00000556380 BBIP1A8MTZ0 92 aa8.69□□□□□ -1.02
SRP54-210ENST00000556380 EVPLLA8MZ36 301 aa8.69□□□□□ -1.02
SRP54-210ENST00000556380 ADAMDEC1O15204 470 aa8.69□□□□□ -1.02
SRP54-210ENST00000556380 GCM2O75603 506 aaPredicted RBP8.69□□□□□ -1.02
SRP54-210ENST00000556380 CSTAP01040 98 aa8.69□□□□□ -1.02
SRP54-210ENST00000556380 NPPAP01160 153 aa8.69□□□□□ -1.02
SRP54-210ENST00000556380 BCHEP06276 602 aa8.69□□□□□ -1.02
SRP54-210ENST00000556380 UBTFL6P0CB48 400 aaPredicted RBP8.69□□□□□ -1.02
SRP54-210ENST00000556380 NID1P14543 1247 aa8.69□□□□□ -1.02
SRP54-210ENST00000556380 POU3F2P20265 443 aaPredicted RBP8.69□□□□□ -1.02
SRP54-210ENST00000556380 GCKP35557 465 aa8.69□□□□□ -1.02
SRP54-210ENST00000556380 TIMP3P35625 211 aa8.69□□□□□ -1.02
SRP54-210ENST00000556380 EIF1P41567 113 aaKnown RBP8.69□□□□□ -1.02
SRP54-210ENST00000556380 SMSP52788 366 aa8.69□□□□□ -1.02
SRP54-210ENST00000556380 CRISP3P54108 245 aa8.69□□□□□ -1.02
SRP54-210ENST00000556380 SESN3P58005 492 aa8.69□□□□□ -1.02
SRP54-210ENST00000556380 MTPNP58546 118 aa8.69□□□□□ -1.02
SRP54-210ENST00000556380 RAC1P63000 192 aa8.69□□□□□ -1.02
SRP54-210ENST00000556380 EEF1A1P68104 462 aaKnown RBP8.69□□□□□ -1.02
SRP54-210ENST00000556380 HPCAP84074 193 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms