RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 SRXN1Q9BYN0 137 aa11.32□□□□□ -0.6
HNRNPC-221ENST00000555883 ACTR6Q9GZN1 396 aa11.32□□□□□ -0.6
HNRNPC-221ENST00000555883 ZNF350Q9GZX5 532 aa11.32□□□□□ -0.6
HNRNPC-221ENST00000555883 COQ10BQ9H8M1 238 aa11.32□□□□□ -0.6
HNRNPC-221ENST00000555883 UBTD1Q9HAC8 227 aa11.32□□□□□ -0.6
HNRNPC-221ENST00000555883 BCO1Q9HAY6 547 aa11.32□□□□□ -0.6
HNRNPC-221ENST00000555883 RAP2CQ9Y3L5 183 aa11.32□□□□□ -0.6
HNRNPC-221ENST00000555883 RAI1Q7Z5J4 1906 aaPredicted RBP11.31□□□□□ -0.6
HNRNPC-221ENST00000555883 OIP5O43482 229 aa11.31□□□□□ -0.6
HNRNPC-221ENST00000555883 SCN2BO60939 215 aa11.31□□□□□ -0.6
HNRNPC-221ENST00000555883 GCM2O75603 506 aaPredicted RBP11.31□□□□□ -0.6
HNRNPC-221ENST00000555883 OPN1LWP04000 364 aa11.31□□□□□ -0.6
HNRNPC-221ENST00000555883 HEXAP06865 529 aa11.31□□□□□ -0.6
HNRNPC-221ENST00000555883 YES1P07947 543 aa11.31□□□□□ -0.6
HNRNPC-221ENST00000555883 DHRS4L1P0CG22 281 aa11.31□□□□□ -0.6
HNRNPC-221ENST00000555883 MATN1P21941 496 aa11.31□□□□□ -0.6
HNRNPC-221ENST00000555883 SHC1P29353 583 aa11.31□□□□□ -0.6
HNRNPC-221ENST00000555883 ADSLP30566 484 aaPredicted RBP11.31□□□□□ -0.6
HNRNPC-221ENST00000555883 ABCE1P61221 599 aaKnown RBP11.31□□□□□ -0.6
HNRNPC-221ENST00000555883 SKP2Q13309 424 aa11.31□□□□□ -0.6
HNRNPC-221ENST00000555883 LCE2DQ5TA82 110 aaPredicted RBP11.31□□□□□ -0.6
HNRNPC-221ENST00000555883 ANKRD34AQ69YU3 496 aa11.31□□□□□ -0.6
HNRNPC-221ENST00000555883 ADAM5Q6NVV9 412 aa11.31□□□□□ -0.6
HNRNPC-221ENST00000555883 ZNF704Q6ZNC4 412 aaPredicted RBP11.31□□□□□ -0.6
HNRNPC-221ENST00000555883 PLEKHM3Q6ZWE6 761 aa11.31□□□□□ -0.6
HNRNPC-221ENST00000555883 FCRLAQ7L513 359 aa11.31□□□□□ -0.6
HNRNPC-221ENST00000555883 C6orf120Q7Z4R8 191 aa11.31□□□□□ -0.6
HNRNPC-221ENST00000555883 ZNF611Q8N823 705 aa11.31□□□□□ -0.6
HNRNPC-221ENST00000555883 ZNF781Q8N8C0 355 aa11.31□□□□□ -0.6
HNRNPC-221ENST00000555883 VPS37AQ8NEZ2 397 aa11.31□□□□□ -0.6
HNRNPC-221ENST00000555883 OR5D16Q8NGK9 328 aa11.31□□□□□ -0.6
HNRNPC-221ENST00000555883 OR5AK3PQ8NH89 298 aa11.31□□□□□ -0.6
HNRNPC-221ENST00000555883 ABHD3Q8WU67 409 aa11.31□□□□□ -0.6
HNRNPC-221ENST00000555883 BDH2Q9BUT1 245 aa11.31□□□□□ -0.6
HNRNPC-221ENST00000555883 LAT2Q9GZY6 243 aa11.31□□□□□ -0.6
HNRNPC-221ENST00000555883 SERHL2Q9H4I8 314 aa11.31□□□□□ -0.6
HNRNPC-221ENST00000555883 ZNF701Q9NV72 531 aaPredicted RBP11.31□□□□□ -0.6
HNRNPC-221ENST00000555883 EXD2Q9NVH0 621 aa11.31□□□□□ -0.6
HNRNPC-221ENST00000555883 KLHL9Q9P2J3 617 aa11.31□□□□□ -0.6
HNRNPC-221ENST00000555883 PCDHGB4Q9UN71 923 aa11.31□□□□□ -0.6
HNRNPC-221ENST00000555883 NPIPA5A0A0B4J1W7 369 aa11.3□□□□□ -0.6
HNRNPC-221ENST00000555883 RNF103-CHMP3A0A140T963 221 aa11.3□□□□□ -0.6
HNRNPC-221ENST00000555883 PRSS51A0A1B0GVH4 220 aa11.3□□□□□ -0.6
HNRNPC-221ENST00000555883 NPIPA7E9PJI5 369 aa11.3□□□□□ -0.6
HNRNPC-221ENST00000555883 RGS16O15492 202 aaPredicted RBP11.3□□□□□ -0.6
HNRNPC-221ENST00000555883 KIAA0513O60268 411 aa11.3□□□□□ -0.6
HNRNPC-221ENST00000555883 UGT2B17O75795 530 aa11.3□□□□□ -0.6
HNRNPC-221ENST00000555883 CNOT4O95628 575 aaKnown RBP11.3□□□□□ -0.6
HNRNPC-221ENST00000555883 NPIPA8P0DM63 369 aa11.3□□□□□ -0.6
HNRNPC-221ENST00000555883 FKBP2P26885 142 aaKnown RBP11.3□□□□□ -0.6
HNRNPC-221ENST00000555883 SLC7A1P30825 629 aa11.3□□□□□ -0.6
HNRNPC-221ENST00000555883 SOAT1P35610 550 aa11.3□□□□□ -0.6
HNRNPC-221ENST00000555883 RPL14P50914 215 aaKnown RBP11.3□□□□□ -0.6
HNRNPC-221ENST00000555883 TXNL4AP83876 142 aaKnown RBP11.3□□□□□ -0.6
HNRNPC-221ENST00000555883 ZNF844Q08AG5 666 aa11.3□□□□□ -0.6
HNRNPC-221ENST00000555883 QPRTQ15274 297 aa11.3□□□□□ -0.6
HNRNPC-221ENST00000555883 CHI3L2Q15782 390 aa11.3□□□□□ -0.6
HNRNPC-221ENST00000555883 TOMM34Q15785 309 aaPredicted RBP11.3□□□□□ -0.6
HNRNPC-221ENST00000555883 PGS1Q32NB8 556 aa11.3□□□□□ -0.6
HNRNPC-221ENST00000555883 KRT71Q3SY84 523 aa11.3□□□□□ -0.6
HNRNPC-221ENST00000555883 TMEM176BQ3YBM2 270 aaPredicted RBP11.3□□□□□ -0.6
HNRNPC-221ENST00000555883 TNFAIP8L3Q5GJ75 292 aa11.3□□□□□ -0.6
HNRNPC-221ENST00000555883 PDZK1Q5T2W1 519 aa11.3□□□□□ -0.6
HNRNPC-221ENST00000555883 SFRP5Q5T4F7 317 aa11.3□□□□□ -0.6
HNRNPC-221ENST00000555883 ANXA8L1Q5VT79 327 aa11.3□□□□□ -0.6
HNRNPC-221ENST00000555883 OR4F3Q6IEY1 312 aa11.3□□□□□ -0.6
HNRNPC-221ENST00000555883 EIF3MQ7L2H7 374 aaKnown RBP11.3□□□□□ -0.6
HNRNPC-221ENST00000555883 TUSC5Q8IXB3 177 aa11.3□□□□□ -0.6
HNRNPC-221ENST00000555883 FAM71CQ8NEG0 241 aa11.3□□□□□ -0.6
HNRNPC-221ENST00000555883 SLC25A43Q8WUT9 341 aaPredicted RBP11.3□□□□□ -0.6
HNRNPC-221ENST00000555883 NUDT8Q8WV74 236 aa11.3□□□□□ -0.6
HNRNPC-221ENST00000555883 TMEM234Q8WY98 164 aa11.3□□□□□ -0.6
HNRNPC-221ENST00000555883 ROBO4Q8WZ75 1007 aa11.3□□□□□ -0.6
HNRNPC-221ENST00000555883 HSD17B8Q92506 261 aa11.3□□□□□ -0.6
HNRNPC-221ENST00000555883 SLC35G5Q96KT7 338 aa11.3□□□□□ -0.6
HNRNPC-221ENST00000555883 PSD2Q9BQI7 771 aa11.3□□□□□ -0.6
HNRNPC-221ENST00000555883 SAP130Q9H0E3 1048 aa11.3□□□□□ -0.6
HNRNPC-221ENST00000555883 CXorf56Q9H5V9 222 aa11.3□□□□□ -0.6
HNRNPC-221ENST00000555883 AKTIPQ9H8T0 292 aa11.3□□□□□ -0.6
HNRNPC-221ENST00000555883 NGBQ9NPG2 151 aa11.3□□□□□ -0.6
HNRNPC-221ENST00000555883 SLC35A3Q9Y2D2 325 aa11.3□□□□□ -0.6
HNRNPC-221ENST00000555883 ZNF724A8MTY0 619 aa11.29□□□□□ -0.6
HNRNPC-221ENST00000555883 HS3ST1O14792 307 aa11.29□□□□□ -0.6
HNRNPC-221ENST00000555883 ANKRD28O15084 1053 aa11.29□□□□□ -0.6
HNRNPC-221ENST00000555883 ITM2AO43736 263 aa11.29□□□□□ -0.6
HNRNPC-221ENST00000555883 FCMRO60667 390 aa11.29□□□□□ -0.6
HNRNPC-221ENST00000555883 CYTIPO60759 359 aa11.29□□□□□ -0.6
HNRNPC-221ENST00000555883 PGCP20142 388 aa11.29□□□□□ -0.6
HNRNPC-221ENST00000555883 UQCRC2P22695 453 aa11.29□□□□□ -0.6
HNRNPC-221ENST00000555883 CLNS1AP54105 237 aaKnown RBP11.29□□□□□ -0.6
HNRNPC-221ENST00000555883 RPS26P62854 115 aaKnown RBP11.29□□□□□ -0.6
HNRNPC-221ENST00000555883 LTBQ06643 244 aa11.29□□□□□ -0.6
HNRNPC-221ENST00000555883 LRRC74AQ0VAA2 488 aa11.29□□□□□ -0.6
HNRNPC-221ENST00000555883 ITGADQ13349 1161 aa11.29□□□□□ -0.6
HNRNPC-221ENST00000555883 PDCD2Q16342 344 aaPredicted RBP11.29□□□□□ -0.6
HNRNPC-221ENST00000555883 ATAD3BQ5T9A4 648 aa11.29□□□□□ -0.6
HNRNPC-221ENST00000555883 SAXO2Q658L1 398 aa11.29□□□□□ -0.6
HNRNPC-221ENST00000555883 OGFOD2Q6N063 350 aa11.29□□□□□ -0.6
HNRNPC-221ENST00000555883 CLEC9AQ6UXN8 241 aa11.29□□□□□ -0.6
HNRNPC-221ENST00000555883 DNAJC14Q6Y2X3 702 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms