RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 VSTM2LQ96N03 204 aa2.57□□□□□ -2
MTHFD1-212ENST00000555858 FOXN4Q96NZ1 517 aa2.57□□□□□ -2
MTHFD1-212ENST00000555858 RBM4BQ9BQ04 359 aaKnown RBP2.57□□□□□ -2
MTHFD1-212ENST00000555858 ACBD6Q9BR61 282 aa2.57□□□□□ -2
MTHFD1-212ENST00000555858 OVOL2Q9BRP0 275 aa2.57□□□□□ -2
MTHFD1-212ENST00000555858 ALG12Q9BV10 488 aa2.57□□□□□ -2
MTHFD1-212ENST00000555858 RBM4Q9BWF3 364 aaKnown RBP2.57□□□□□ -2
MTHFD1-212ENST00000555858 BBS2Q9BXC9 721 aa2.57□□□□□ -2
MTHFD1-212ENST00000555858 UBXN6Q9BZV1 441 aa2.57□□□□□ -2
MTHFD1-212ENST00000555858 ASB8Q9H765 288 aa2.57□□□□□ -2
MTHFD1-212ENST00000555858 KAT8Q9H7Z6 458 aaKnown RBP2.57□□□□□ -2
MTHFD1-212ENST00000555858 SP140LQ9H930 580 aa2.57□□□□□ -2
MTHFD1-212ENST00000555858 LPAR2Q9HBW0 351 aa2.57□□□□□ -2
MTHFD1-212ENST00000555858 INIPQ9NRY2 104 aa2.57□□□□□ -2
MTHFD1-212ENST00000555858 ZDHHC18Q9NUE0 388 aa2.57□□□□□ -2
MTHFD1-212ENST00000555858 PLCXD1Q9NUJ7 323 aa2.57□□□□□ -2
MTHFD1-212ENST00000555858 ETNK2Q9NVF9 386 aa2.57□□□□□ -2
MTHFD1-212ENST00000555858 RMND1Q9NWS8 449 aa2.57□□□□□ -2
MTHFD1-212ENST00000555858 RHBDL2Q9NX52 303 aa2.57□□□□□ -2
MTHFD1-212ENST00000555858 NDE1Q9NXR1 346 aa2.57□□□□□ -2
MTHFD1-212ENST00000555858 RBAKQ9NYW8 714 aaPredicted RBP2.57□□□□□ -2
MTHFD1-212ENST00000555858 NLGN3Q9NZ94 848 aa2.57□□□□□ -2
MTHFD1-212ENST00000555858 CHRNA9Q9UGM1 479 aa2.57□□□□□ -2
MTHFD1-212ENST00000555858 IKZF3Q9UKT9 509 aa2.57□□□□□ -2
MTHFD1-212ENST00000555858 RAB23Q9ULC3 237 aa2.57□□□□□ -2
MTHFD1-212ENST00000555858 FZR1Q9UM11 496 aa2.57□□□□□ -2
MTHFD1-212ENST00000555858 PSMD13Q9UNM6 376 aa2.57□□□□□ -2
MTHFD1-212ENST00000555858 PPP1R3CQ9UQK1 317 aa2.57□□□□□ -2
MTHFD1-212ENST00000555858 GINS2Q9Y248 185 aa2.57□□□□□ -2
MTHFD1-212ENST00000555858 EIF3LQ9Y262 564 aaKnown RBP2.57□□□□□ -2
MTHFD1-212ENST00000555858 AP3M1Q9Y2T2 418 aa2.57□□□□□ -2
MTHFD1-212ENST00000555858 IFT52Q9Y366 437 aa2.57□□□□□ -2
MTHFD1-212ENST00000555858 MRPS18CQ9Y3D5 142 aaKnown RBP2.57□□□□□ -2
MTHFD1-212ENST00000555858 KLF2Q9Y5W3 355 aaPredicted RBP2.57□□□□□ -2
MTHFD1-212ENST00000555858 FKBP7Q9Y680 259 aa2.57□□□□□ -2
MTHFD1-212ENST00000555858 CSNK1G3Q9Y6M4 447 aa2.57□□□□□ -2
MTHFD1-212ENST00000555858 V9GYQ6 96 aa2.57□□□□□ -2
MTHFD1-212ENST00000555858 GREB1LQ9C091 1923 aaPredicted RBP2.57□□□□□ -2
MTHFD1-212ENST00000555858 GRIN2DO15399 1336 aa2.57□□□□□ -2
MTHFD1-212ENST00000555858 PHLPP2Q6ZVD8 1323 aa2.57□□□□□ -2
MTHFD1-212ENST00000555858 ARHGAP31Q2M1Z3 1444 aa2.57□□□□□ -2
MTHFD1-212ENST00000555858 CEP162Q5TB80 1403 aa2.57□□□□□ -2
MTHFD1-212ENST00000555858 KIAA1210Q9ULL0 1709 aa2.56□□□□□ -2
MTHFD1-212ENST00000555858 IGKV2D-30A0A075B6S6 120 aa2.56□□□□□ -2
MTHFD1-212ENST00000555858 PVALEFA0A1B0GWK0 134 aa2.56□□□□□ -2
MTHFD1-212ENST00000555858 ERVV-1B6SEH8 477 aa2.56□□□□□ -2
MTHFD1-212ENST00000555858 NPIPA2E9PIF3 369 aa2.56□□□□□ -2
MTHFD1-212ENST00000555858 K7EQM0 130 aa2.56□□□□□ -2
MTHFD1-212ENST00000555858 SDHDO14521 159 aa2.56□□□□□ -2
MTHFD1-212ENST00000555858 SLC22A1O15245 554 aa2.56□□□□□ -2
MTHFD1-212ENST00000555858 EIF3HO15372 352 aaKnown RBP eCLIP2.56□□□□□ -2
MTHFD1-212ENST00000555858 ZSCAN12O43309 604 aa2.56□□□□□ -2
MTHFD1-212ENST00000555858 PI15O43692 258 aa2.56□□□□□ -2
MTHFD1-212ENST00000555858 CALUO43852 315 aaPredicted RBP2.56□□□□□ -2
MTHFD1-212ENST00000555858 MGRN1O60291 552 aa2.56□□□□□ -2
MTHFD1-212ENST00000555858 PFKFB2O60825 505 aa2.56□□□□□ -2
MTHFD1-212ENST00000555858 NOS1APO75052 506 aaPredicted RBP2.56□□□□□ -2
MTHFD1-212ENST00000555858 SDC3O75056 442 aa2.56□□□□□ -2
MTHFD1-212ENST00000555858 WBP4O75554 376 aaKnown RBP2.56□□□□□ -2
MTHFD1-212ENST00000555858 CLPXO76031 633 aa2.56□□□□□ -2
MTHFD1-212ENST00000555858 RAB3DO95716 219 aa2.56□□□□□ -2
MTHFD1-212ENST00000555858 SNAI1O95863 264 aaPredicted RBP2.56□□□□□ -2
MTHFD1-212ENST00000555858 DHFRP00374 187 aa2.56□□□□□ -2
MTHFD1-212ENST00000555858 GOT2P00505 430 aaKnown RBP2.56□□□□□ -2
MTHFD1-212ENST00000555858 SLC35G4P0C7Q5 338 aa2.56□□□□□ -2
MTHFD1-212ENST00000555858 SLC2A3P11169 496 aa2.56□□□□□ -2
MTHFD1-212ENST00000555858 CBR1P16152 277 aa2.56□□□□□ -2
MTHFD1-212ENST00000555858 TSPAN8P19075 237 aa2.56□□□□□ -2
MTHFD1-212ENST00000555858 CCNOP22674 350 aa2.56□□□□□ -2
MTHFD1-212ENST00000555858 FCGR2CP31995 323 aa2.56□□□□□ -2
MTHFD1-212ENST00000555858 CCKARP32238 428 aa2.56□□□□□ -2
MTHFD1-212ENST00000555858 SERPINB9P50453 376 aa2.56□□□□□ -2
MTHFD1-212ENST00000555858 CRYBA2P53672 197 aa2.56□□□□□ -2
MTHFD1-212ENST00000555858 PRMT2P55345 433 aa2.56□□□□□ -2
MTHFD1-212ENST00000555858 CLDN8P56748 225 aa2.56□□□□□ -2
MTHFD1-212ENST00000555858 ERVK-16P61578 105 aa2.56□□□□□ -2
MTHFD1-212ENST00000555858 YWHAGP61981 247 aaKnown RBP eCLIP2.56□□□□□ -2
MTHFD1-212ENST00000555858 SNRPD1P62314 119 aaKnown RBP2.56□□□□□ -2
MTHFD1-212ENST00000555858 SKP1P63208 163 aa2.56□□□□□ -2
MTHFD1-212ENST00000555858 CSNK1G2P78368 415 aa2.56□□□□□ -2
MTHFD1-212ENST00000555858 DHODHQ02127 395 aa2.56□□□□□ -2
MTHFD1-212ENST00000555858 RIPPLY1Q0D2K3 151 aa2.56□□□□□ -2
MTHFD1-212ENST00000555858 CDH17Q12864 832 aa2.56□□□□□ -2
MTHFD1-212ENST00000555858 MERTKQ12866 999 aa2.56□□□□□ -2
MTHFD1-212ENST00000555858 STX5Q13190 355 aa2.56□□□□□ -2
MTHFD1-212ENST00000555858 ENPP2Q13822 863 aa2.56□□□□□ -2
MTHFD1-212ENST00000555858 MAPK6Q16659 721 aa2.56□□□□□ -2
MTHFD1-212ENST00000555858 TATDN3Q17R31 274 aa2.56□□□□□ -2
MTHFD1-212ENST00000555858 HLA-BQ31612 363 aa2.56□□□□□ -2
MTHFD1-212ENST00000555858 HNRNPA1L2Q32P51 320 aaKnown RBP2.56□□□□□ -2
MTHFD1-212ENST00000555858 HSDL1Q3SXM5 330 aa2.56□□□□□ -2
MTHFD1-212ENST00000555858 BCL7AQ4VC05 210 aa2.56□□□□□ -2
MTHFD1-212ENST00000555858 TCHHL1Q5QJ38 904 aaPredicted RBP2.56□□□□□ -2
MTHFD1-212ENST00000555858 DMKNQ6E0U4 476 aaPredicted RBP2.56□□□□□ -2
MTHFD1-212ENST00000555858 ZNF530Q6P9A1 599 aaPredicted RBP2.56□□□□□ -2
MTHFD1-212ENST00000555858 SCARA5Q6ZMJ2 495 aa2.56□□□□□ -2
MTHFD1-212ENST00000555858 RTL4Q6ZR62 310 aa2.56□□□□□ -2
MTHFD1-212ENST00000555858 Q6ZSR9 355 aa2.56□□□□□ -2
MTHFD1-212ENST00000555858 FRA10AC1Q70Z53 315 aa2.56□□□□□ -2
MTHFD1-212ENST00000555858 ERICH1Q86X53 443 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms