RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 A0A087WUU8 490 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 TRAPPC13A5PLN9 417 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 DLGAP1O14490 977 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 GNB5O14775 395 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 CDC40O60508 579 aaKnown RBP eCLIP9.31□□□□□ -0.92
SRP54-208ENST00000555557 EIF4E2O60573 245 aaKnown RBP9.31□□□□□ -0.92
SRP54-208ENST00000555557 FMO6PO60774 539 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 MITFO75030 526 aaPredicted RBP9.31□□□□□ -0.92
SRP54-208ENST00000555557 CCNB2O95067 398 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 LYPD3O95274 346 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 WDPCPO95876 746 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 GASTP01350 101 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 ALPLP05186 524 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 MST1P26927 711 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 IFNA8P32881 189 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 CD96P40200 585 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 EIF2S3P41091 472 aaKnown RBP9.31□□□□□ -0.92
SRP54-208ENST00000555557 CYB561P49447 251 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 ALDH3A2P51648 485 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 COPZ1P61923 177 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 PPP2R2BQ00005 443 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 IL1RL1Q01638 556 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 C17orf67Q0P5P2 114 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 DAG1Q14118 895 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 ZIK1Q3SY52 487 aaPredicted RBP9.31□□□□□ -0.92
SRP54-208ENST00000555557 SLC22A10Q63ZE4 541 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 GALNT5Q7Z7M9 940 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 P3H2Q8IVL5 708 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 ZNF440Q8IYI8 595 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 LSMEM1Q8N8F7 131 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 ATG16L2Q8NAA4 619 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 B4GALNT2Q8NHY0 566 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 ZNF563Q8TA94 476 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 PAQR8Q8TEZ7 354 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 NRBF2Q96F24 287 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 NIPSNAP1Q9BPW8 284 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 PRSS27Q9BQR3 290 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 FUZQ9BT04 418 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 OSBPL11Q9BXB4 747 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 TRIM2Q9C040 744 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 PROK2Q9HC23 129 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 SH2D2AQ9NP31 389 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 EXOSC3Q9NQT5 275 aaKnown RBP9.31□□□□□ -0.92
SRP54-208ENST00000555557 GPR83Q9NYM4 423 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 CNOT11Q9UKZ1 510 aaKnown RBP9.31□□□□□ -0.92
SRP54-208ENST00000555557 TMCC3Q9ULS5 477 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 WIF1Q9Y5W5 379 aa9.31□□□□□ -0.92
SRP54-208ENST00000555557 CEP295Q9C0D2 2601 aa9.3□□□□□ -0.92
SRP54-208ENST00000555557 DMXL2Q8TDJ6 3036 aa9.3□□□□□ -0.92
SRP54-208ENST00000555557 A0A0B4J2E0 115 aa9.3□□□□□ -0.92
SRP54-208ENST00000555557 A0A1B0GX12 115 aa9.3□□□□□ -0.92
SRP54-208ENST00000555557 SH3PXD2BA1X283 911 aa9.3□□□□□ -0.92
SRP54-208ENST00000555557 OR10H3O60404 316 aa9.3□□□□□ -0.92
SRP54-208ENST00000555557 SNAP29O95721 258 aa9.3□□□□□ -0.92
SRP54-208ENST00000555557 ADRB1P08588 477 aa9.3□□□□□ -0.92
SRP54-208ENST00000555557 PEX19P40855 299 aa9.3□□□□□ -0.92
SRP54-208ENST00000555557 HLCSP50747 726 aa9.3□□□□□ -0.92
SRP54-208ENST00000555557 P2RX1P51575 399 aa9.3□□□□□ -0.92
SRP54-208ENST00000555557 SMIM11AP58511 58 aa9.3□□□□□ -0.92
SRP54-208ENST00000555557 BLMHQ13867 455 aa9.3□□□□□ -0.92
SRP54-208ENST00000555557 TRAM2Q15035 370 aa9.3□□□□□ -0.92
SRP54-208ENST00000555557 ALG10BQ5I7T1 473 aa9.3□□□□□ -0.92
SRP54-208ENST00000555557 ZNF613Q6PF04 617 aa9.3□□□□□ -0.92
SRP54-208ENST00000555557 FDCSPQ8NFU4 85 aa9.3□□□□□ -0.92
SRP54-208ENST00000555557 OR4K5Q8NGD3 323 aa9.3□□□□□ -0.92
SRP54-208ENST00000555557 OR5W2Q8NH69 310 aa9.3□□□□□ -0.92
SRP54-208ENST00000555557 SNIP1Q8TAD8 396 aaKnown RBP9.3□□□□□ -0.92
SRP54-208ENST00000555557 SLC35B4Q969S0 331 aa9.3□□□□□ -0.92
SRP54-208ENST00000555557 GTPBP3Q969Y2 492 aaKnown RBP9.3□□□□□ -0.92
SRP54-208ENST00000555557 SGCZQ96LD1 299 aa9.3□□□□□ -0.92
SRP54-208ENST00000555557 DCBLD2Q96PD2 775 aa9.3□□□□□ -0.92
SRP54-208ENST00000555557 SIGLEC12Q96PQ1 595 aa9.3□□□□□ -0.92
SRP54-208ENST00000555557 ZNF184Q99676 751 aaPredicted RBP9.3□□□□□ -0.92
SRP54-208ENST00000555557 RBM4BQ9BQ04 359 aaKnown RBP9.3□□□□□ -0.92
SRP54-208ENST00000555557 RBM4Q9BWF3 364 aaKnown RBP9.3□□□□□ -0.92
SRP54-208ENST00000555557 VCXQ9H320 206 aa9.3□□□□□ -0.92
SRP54-208ENST00000555557 CCDC86Q9H6F5 360 aaKnown RBP9.3□□□□□ -0.92
SRP54-208ENST00000555557 ZNF552Q9H707 407 aaPredicted RBP9.3□□□□□ -0.92
SRP54-208ENST00000555557 EVA1AQ9H8M9 152 aa9.3□□□□□ -0.92
SRP54-208ENST00000555557 PPP4R1LQ9P1A2 415 aa9.3□□□□□ -0.92
SRP54-208ENST00000555557 LRFN1Q9P244 771 aa9.3□□□□□ -0.92
SRP54-208ENST00000555557 RPS6KB2Q9UBS0 482 aa9.3□□□□□ -0.92
SRP54-208ENST00000555557 TMEFF2Q9UIK5 374 aaPredicted RBP9.3□□□□□ -0.92
SRP54-208ENST00000555557 FBXL2Q9UKC9 423 aa9.3□□□□□ -0.92
SRP54-208ENST00000555557 A0A0G2JMM0 328 aa9.29□□□□□ -0.92
SRP54-208ENST00000555557 A0A1W2PPB8 328 aa9.29□□□□□ -0.92
SRP54-208ENST00000555557 A0A1W2PRS3 328 aa9.29□□□□□ -0.92
SRP54-208ENST00000555557 A6NHS1 94 aa9.29□□□□□ -0.92
SRP54-208ENST00000555557 KIR3DP1A8MWS1 328 aa9.29□□□□□ -0.92
SRP54-208ENST00000555557 KPNA4O00629 521 aaPredicted RBP9.29□□□□□ -0.92
SRP54-208ENST00000555557 PIP5K1CO60331 668 aa9.29□□□□□ -0.92
SRP54-208ENST00000555557 ENDOUP21128 410 aaKnown RBP9.29□□□□□ -0.92
SRP54-208ENST00000555557 POLR2IP36954 125 aaKnown RBP9.29□□□□□ -0.92
SRP54-208ENST00000555557 DNASE1L1P49184 302 aa9.29□□□□□ -0.92
SRP54-208ENST00000555557 RPS6KA3P51812 740 aa9.29□□□□□ -0.92
SRP54-208ENST00000555557 GPR85P60893 370 aa9.29□□□□□ -0.92
SRP54-208ENST00000555557 TUBA3CQ13748 450 aa9.29□□□□□ -0.92
SRP54-208ENST00000555557 CBFBQ13951 182 aa9.29□□□□□ -0.92
SRP54-208ENST00000555557 C6orf52Q5T4I8 152 aa9.29□□□□□ -0.92
SRP54-208ENST00000555557 AGAP7PQ5VUJ5 663 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms