RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 CRYGSP22914 178 aa10.59□□□□□ -0.71
VRK1-204ENST00000555351 EPHA3P29320 983 aa10.59□□□□□ -0.71
VRK1-204ENST00000555351 CHI3L1P36222 383 aaPredicted RBP10.59□□□□□ -0.71
VRK1-204ENST00000555351 SLC6A8P48029 635 aa10.59□□□□□ -0.71
VRK1-204ENST00000555351 RAC3P60763 192 aa10.59□□□□□ -0.71
VRK1-204ENST00000555351 UFM1P61960 85 aa10.59□□□□□ -0.71
VRK1-204ENST00000555351 SIRPAP78324 504 aa10.59□□□□□ -0.71
VRK1-204ENST00000555351 GPR68Q15743 365 aa10.59□□□□□ -0.71
VRK1-204ENST00000555351 ZNF239Q16600 458 aaKnown RBP10.59□□□□□ -0.71
VRK1-204ENST00000555351 PDCD4Q53EL6 469 aaKnown RBP10.59□□□□□ -0.71
VRK1-204ENST00000555351 AGBL2Q5U5Z8 902 aa10.59□□□□□ -0.71
VRK1-204ENST00000555351 C3orf33Q6P1S2 294 aa10.59□□□□□ -0.71
VRK1-204ENST00000555351 MSANTD1Q6ZTZ1 278 aa10.59□□□□□ -0.71
VRK1-204ENST00000555351 BEND4Q6ZU67 534 aa10.59□□□□□ -0.71
VRK1-204ENST00000555351 STK32CQ86UX6 486 aa10.59□□□□□ -0.71
VRK1-204ENST00000555351 ANKRD46Q86W74 232 aa10.59□□□□□ -0.71
VRK1-204ENST00000555351 CMIPQ8IY22 773 aa10.59□□□□□ -0.71
VRK1-204ENST00000555351 ZNF619Q8N2I2 560 aa10.59□□□□□ -0.71
VRK1-204ENST00000555351 PIP4P2Q8N4L2 257 aa10.59□□□□□ -0.71
VRK1-204ENST00000555351 ZNF614Q8N883 585 aa10.59□□□□□ -0.71
VRK1-204ENST00000555351 ZNF610Q8N9Z0 462 aa10.59□□□□□ -0.71
VRK1-204ENST00000555351 FBXO27Q8NI29 283 aa10.59□□□□□ -0.71
VRK1-204ENST00000555351 PIWIL2Q8TC59 973 aaKnown RBP10.59□□□□□ -0.71
VRK1-204ENST00000555351 RNF128Q8TEB7 428 aa10.59□□□□□ -0.71
VRK1-204ENST00000555351 ZFP90Q8TF47 636 aa10.59□□□□□ -0.71
VRK1-204ENST00000555351 SLC25A43Q8WUT9 341 aaPredicted RBP10.59□□□□□ -0.71
VRK1-204ENST00000555351 XAGE5Q8WWM1 108 aa10.59□□□□□ -0.71
VRK1-204ENST00000555351 ROPN1LQ96C74 230 aa10.59□□□□□ -0.71
VRK1-204ENST00000555351 REXO5Q96IC2 774 aaKnown RBP10.59□□□□□ -0.71
VRK1-204ENST00000555351 TRNT1Q96Q11 434 aaKnown RBP10.59□□□□□ -0.71
VRK1-204ENST00000555351 OR52E6Q96RD3 313 aa10.59□□□□□ -0.71
VRK1-204ENST00000555351 PANX1Q96RD7 426 aa10.59□□□□□ -0.71
VRK1-204ENST00000555351 USB1Q9BQ65 265 aaKnown RBP10.59□□□□□ -0.71
VRK1-204ENST00000555351 KLHDC3Q9BQ90 382 aa10.59□□□□□ -0.71
VRK1-204ENST00000555351 SLC35A5Q9BS91 424 aa10.59□□□□□ -0.71
VRK1-204ENST00000555351 OPN3Q9H1Y3 402 aaPredicted RBP10.59□□□□□ -0.71
VRK1-204ENST00000555351 EXOSC3Q9NQT5 275 aaKnown RBP10.59□□□□□ -0.71
VRK1-204ENST00000555351 MARCOQ9UEW3 520 aaPredicted RBP10.59□□□□□ -0.71
VRK1-204ENST00000555351 MKLN1Q9UL63 735 aa10.59□□□□□ -0.71
VRK1-204ENST00000555351 NUP214P35658 2090 aaPredicted RBP10.59□□□□□ -0.71
VRK1-204ENST00000555351 HRNRQ86YZ3 2850 aaPredicted RBP10.59□□□□□ -0.71
VRK1-204ENST00000555351 SPG11Q96JI7 2443 aa10.58□□□□□ -0.72
VRK1-204ENST00000555351 EFNA2O43921 213 aa10.58□□□□□ -0.72
VRK1-204ENST00000555351 TGDSO95455 350 aa10.58□□□□□ -0.72
VRK1-204ENST00000555351 KRT75O95678 551 aa10.58□□□□□ -0.72
VRK1-204ENST00000555351 ZCCHC18P0CG32 403 aa10.58□□□□□ -0.72
VRK1-204ENST00000555351 OR12D1P0DN82 309 aa10.58□□□□□ -0.72
VRK1-204ENST00000555351 AGTR1P30556 359 aa10.58□□□□□ -0.72
VRK1-204ENST00000555351 KCNJ5P48544 419 aa10.58□□□□□ -0.72
VRK1-204ENST00000555351 QPRTQ15274 297 aa10.58□□□□□ -0.72
VRK1-204ENST00000555351 TYW3Q6IPR3 259 aaKnown RBP10.58□□□□□ -0.72
VRK1-204ENST00000555351 FRRS1Q6ZNA5 592 aa10.58□□□□□ -0.72
VRK1-204ENST00000555351 TMCO5AQ8N6Q1 288 aa10.58□□□□□ -0.72
VRK1-204ENST00000555351 NRGNQ92686 78 aa10.58□□□□□ -0.72
VRK1-204ENST00000555351 TEX37Q96LM6 180 aa10.58□□□□□ -0.72
VRK1-204ENST00000555351 C7orf26Q96N11 449 aa10.58□□□□□ -0.72
VRK1-204ENST00000555351 WFIKKN1Q96NZ8 548 aa10.58□□□□□ -0.72
VRK1-204ENST00000555351 MED18Q9BUE0 208 aa10.58□□□□□ -0.72
VRK1-204ENST00000555351 WDR55Q9H6Y2 383 aaPredicted RBP10.58□□□□□ -0.72
VRK1-204ENST00000555351 SDR39U1Q9NRG7 319 aaPredicted RBP10.58□□□□□ -0.72
VRK1-204ENST00000555351 SERINC1Q9NRX5 453 aa10.58□□□□□ -0.72
VRK1-204ENST00000555351 CCM2LQ9NUG4 571 aaPredicted RBP10.58□□□□□ -0.72
VRK1-204ENST00000555351 ACER3Q9NUN7 267 aa10.58□□□□□ -0.72
VRK1-204ENST00000555351 ZIM2Q9NZV7 527 aa10.58□□□□□ -0.72
VRK1-204ENST00000555351 HIVEP1P15822 2718 aa10.58□□□□□ -0.72
VRK1-204ENST00000555351 CELSR1Q9NYQ6 3014 aa10.57□□□□□ -0.72
VRK1-204ENST00000555351 UQCRHLA0A096LP55 91 aa10.57□□□□□ -0.72
VRK1-204ENST00000555351 HMGN4O00479 90 aa10.57□□□□□ -0.72
VRK1-204ENST00000555351 FAAHO00519 579 aa10.57□□□□□ -0.72
VRK1-204ENST00000555351 DNPH1O43598 174 aa10.57□□□□□ -0.72
VRK1-204ENST00000555351 SLC22A3O75751 556 aa10.57□□□□□ -0.72
VRK1-204ENST00000555351 PRKD3O94806 890 aa10.57□□□□□ -0.72
VRK1-204ENST00000555351 ATE1O95260 518 aa10.57□□□□□ -0.72
VRK1-204ENST00000555351 PSMB1P20618 241 aaKnown RBP10.57□□□□□ -0.72
VRK1-204ENST00000555351 IL12AP29459 219 aa10.57□□□□□ -0.72
VRK1-204ENST00000555351 SLC7A1P30825 629 aa10.57□□□□□ -0.72
VRK1-204ENST00000555351 CCKARP32238 428 aa10.57□□□□□ -0.72
VRK1-204ENST00000555351 SFTPDP35247 375 aa10.57□□□□□ -0.72
VRK1-204ENST00000555351 PGM1P36871 562 aa10.57□□□□□ -0.72
VRK1-204ENST00000555351 APOBEC1P41238 236 aaKnown RBP10.57□□□□□ -0.72
VRK1-204ENST00000555351 MRPL19P49406 292 aaKnown RBP10.57□□□□□ -0.72
VRK1-204ENST00000555351 CLK1P49759 484 aaKnown RBP10.57□□□□□ -0.72
VRK1-204ENST00000555351 MAP2K6P52564 334 aa10.57□□□□□ -0.72
VRK1-204ENST00000555351 SESN3P58005 492 aa10.57□□□□□ -0.72
VRK1-204ENST00000555351 IRX1P78414 480 aaPredicted RBP10.57□□□□□ -0.72
VRK1-204ENST00000555351 HPCAP84074 193 aa10.57□□□□□ -0.72
VRK1-204ENST00000555351 FUT5Q11128 374 aa10.57□□□□□ -0.72
VRK1-204ENST00000555351 GNA13Q14344 377 aa10.57□□□□□ -0.72
VRK1-204ENST00000555351 TOMM34Q15785 309 aaPredicted RBP10.57□□□□□ -0.72
VRK1-204ENST00000555351 TMEM176BQ3YBM2 270 aaPredicted RBP10.57□□□□□ -0.72
VRK1-204ENST00000555351 TIGD2Q4W5G0 525 aa10.57□□□□□ -0.72
VRK1-204ENST00000555351 TNFAIP8L2Q6P589 184 aaPredicted RBP10.57□□□□□ -0.72
VRK1-204ENST00000555351 LRRC74BQ6ZQY2 392 aa10.57□□□□□ -0.72
VRK1-204ENST00000555351 FCRLAQ7L513 359 aa10.57□□□□□ -0.72
VRK1-204ENST00000555351 CLEC4FQ8N1N0 589 aa10.57□□□□□ -0.72
VRK1-204ENST00000555351 MGARPQ8TDB4 240 aa10.57□□□□□ -0.72
VRK1-204ENST00000555351 ZNF75CPQ92670 426 aaPredicted RBP10.57□□□□□ -0.72
VRK1-204ENST00000555351 RAB8BQ92930 207 aa10.57□□□□□ -0.72
VRK1-204ENST00000555351 MARK4Q96L34 752 aa10.57□□□□□ -0.72
VRK1-204ENST00000555351 THUMPD3Q9BV44 507 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms