RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 MCF2P10911 925 aa4.38□□□□□ -1.71
VRK1-203ENST00000555067 SLC2A2P11168 524 aaPredicted RBP4.38□□□□□ -1.71
VRK1-203ENST00000555067 CCNB1P14635 433 aa4.38□□□□□ -1.71
VRK1-203ENST00000555067 ACADSP16219 412 aa4.38□□□□□ -1.71
VRK1-203ENST00000555067 CEACAM8P31997 349 aaPredicted RBP4.38□□□□□ -1.71
VRK1-203ENST00000555067 DUSP3P51452 185 aaPredicted RBP4.38□□□□□ -1.71
VRK1-203ENST00000555067 DAOAP59103 153 aa4.38□□□□□ -1.71
VRK1-203ENST00000555067 TRDNQ13061 729 aa4.38□□□□□ -1.71
VRK1-203ENST00000555067 MRPL23Q16540 153 aaKnown RBP4.38□□□□□ -1.71
VRK1-203ENST00000555067 HNRNPA1L2Q32P51 320 aaKnown RBP4.38□□□□□ -1.71
VRK1-203ENST00000555067 SNAI3Q3KNW1 292 aa4.38□□□□□ -1.71
VRK1-203ENST00000555067 TP53I3Q53FA7 332 aa4.38□□□□□ -1.71
VRK1-203ENST00000555067 ADAMTSL4-AS1Q5T5F5 129 aa4.38□□□□□ -1.71
VRK1-203ENST00000555067 ACSM5Q6NUN0 579 aa4.38□□□□□ -1.71
VRK1-203ENST00000555067 VTCN1Q7Z7D3 282 aa4.38□□□□□ -1.71
VRK1-203ENST00000555067 ISCA2Q86U28 154 aa4.38□□□□□ -1.71
VRK1-203ENST00000555067 PQLC3Q8N755 202 aa4.38□□□□□ -1.71
VRK1-203ENST00000555067 MRGPRDQ8TDS7 321 aa4.38□□□□□ -1.71
VRK1-203ENST00000555067 OR1E3Q8WZA6 343 aa4.38□□□□□ -1.71
VRK1-203ENST00000555067 FMO2Q99518 471 aa4.38□□□□□ -1.71
VRK1-203ENST00000555067 VGLL1Q99990 258 aa4.38□□□□□ -1.71
VRK1-203ENST00000555067 OVOL2Q9BRP0 275 aa4.38□□□□□ -1.71
VRK1-203ENST00000555067 DPH7Q9BTV6 452 aa4.38□□□□□ -1.71
VRK1-203ENST00000555067 SPATA16Q9BXB7 569 aa4.38□□□□□ -1.71
VRK1-203ENST00000555067 NXF5Q9H1B4 397 aaKnown RBP4.38□□□□□ -1.71
VRK1-203ENST00000555067 C20orf96Q9NUD7 363 aaPredicted RBP4.38□□□□□ -1.71
VRK1-203ENST00000555067 SIGLEC8Q9NYZ4 499 aa4.38□□□□□ -1.71
VRK1-203ENST00000555067 ZNF221Q9UK13 617 aa4.38□□□□□ -1.71
VRK1-203ENST00000555067 EIF3LQ9Y262 564 aaKnown RBP4.38□□□□□ -1.71
VRK1-203ENST00000555067 C4BPBP20851 252 aa4.37□□□□□ -1.71
VRK1-203ENST00000555067 HMGB2P26583 209 aaKnown RBP4.37□□□□□ -1.71
VRK1-203ENST00000555067 CD1CP29017 333 aa4.37□□□□□ -1.71
VRK1-203ENST00000555067 OTX1P32242 354 aaPredicted RBP4.37□□□□□ -1.71
VRK1-203ENST00000555067 DEKP35659 375 aaKnown RBP4.37□□□□□ -1.71
VRK1-203ENST00000555067 CRYBB2P43320 205 aa4.37□□□□□ -1.71
VRK1-203ENST00000555067 NOVA1P51513 510 aaKnown RBP4.37□□□□□ -1.71
VRK1-203ENST00000555067 RAB11AP62491 216 aa4.37□□□□□ -1.71
VRK1-203ENST00000555067 CDR2Q01850 454 aa4.37□□□□□ -1.71
VRK1-203ENST00000555067 RBBP4Q09028 425 aa4.37□□□□□ -1.71
VRK1-203ENST00000555067 P2RY6Q15077 328 aa4.37□□□□□ -1.71
VRK1-203ENST00000555067 RAB11BQ15907 218 aa4.37□□□□□ -1.71
VRK1-203ENST00000555067 GTDC1Q4AE62 458 aa4.37□□□□□ -1.71
VRK1-203ENST00000555067 SLC8B1Q6J4K2 584 aa4.37□□□□□ -1.71
VRK1-203ENST00000555067 SLC25A47Q6Q0C1 308 aa4.37□□□□□ -1.71
VRK1-203ENST00000555067 DEGS2Q6QHC5 323 aa4.37□□□□□ -1.71
VRK1-203ENST00000555067 ATRAIDQ6UW56 229 aa4.37□□□□□ -1.71
VRK1-203ENST00000555067 SCARA5Q6ZMJ2 495 aa4.37□□□□□ -1.71
VRK1-203ENST00000555067 C19orf35Q6ZS72 473 aa4.37□□□□□ -1.71
VRK1-203ENST00000555067 SCD5Q86SK9 330 aa4.37□□□□□ -1.71
VRK1-203ENST00000555067 LINC00523Q86TU6 105 aa4.37□□□□□ -1.71
VRK1-203ENST00000555067 SLC22A15Q8IZD6 547 aa4.37□□□□□ -1.71
VRK1-203ENST00000555067 ICA1LQ8NDH6 482 aa4.37□□□□□ -1.71
VRK1-203ENST00000555067 TRPV1Q8NER1 839 aa4.37□□□□□ -1.71
VRK1-203ENST00000555067 OR7G2Q8NG99 324 aa4.37□□□□□ -1.71
VRK1-203ENST00000555067 LKAAEAR1Q8TD35 194 aa4.37□□□□□ -1.71
VRK1-203ENST00000555067 HPSE2Q8WWQ2 592 aa4.37□□□□□ -1.71
VRK1-203ENST00000555067 PIBF1Q8WXW3 757 aa4.37□□□□□ -1.71
VRK1-203ENST00000555067 TOP1MTQ969P6 601 aa4.37□□□□□ -1.71
VRK1-203ENST00000555067 TIMD4Q96H15 378 aa4.37□□□□□ -1.71
VRK1-203ENST00000555067 IL4I1Q96RQ9 567 aa4.37□□□□□ -1.71
VRK1-203ENST00000555067 TUBGCP2Q9BSJ2 902 aa4.37□□□□□ -1.71
VRK1-203ENST00000555067 LYRM4Q9HD34 91 aa4.37□□□□□ -1.71
VRK1-203ENST00000555067 ZNF71Q9NQZ8 489 aaPredicted RBP4.37□□□□□ -1.71
VRK1-203ENST00000555067 TEX10Q9NXF1 929 aaPredicted RBP4.37□□□□□ -1.71
VRK1-203ENST00000555067 MTCH1Q9NZJ7 389 aa4.37□□□□□ -1.71
VRK1-203ENST00000555067 TMEM181Q9P2C4 612 aa4.37□□□□□ -1.71
VRK1-203ENST00000555067 CYTH4Q9UIA0 394 aa4.37□□□□□ -1.71
VRK1-203ENST00000555067 IKZF2Q9UKS7 526 aa4.37□□□□□ -1.71
VRK1-203ENST00000555067 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.37□□□□□ -1.71
VRK1-203ENST00000555067 EXOGQ9Y2C4 368 aaKnown RBP4.37□□□□□ -1.71
VRK1-203ENST00000555067 SELENOKQ9Y6D0 94 aa4.37□□□□□ -1.71
VRK1-203ENST00000555067 V9GYY5 206 aaPredicted RBP4.37□□□□□ -1.71
VRK1-203ENST00000555067 FRMPD4Q14CM0 1322 aa4.37□□□□□ -1.71
VRK1-203ENST00000555067 A0A1W2PPV4 95 aa4.36□□□□□ -1.71
VRK1-203ENST00000555067 C12orf71A8MTZ7 269 aa4.36□□□□□ -1.71
VRK1-203ENST00000555067 G3V4G9 280 aa4.36□□□□□ -1.71
VRK1-203ENST00000555067 K7ERI5 159 aa4.36□□□□□ -1.71
VRK1-203ENST00000555067 PSMD11O00231 422 aa4.36□□□□□ -1.71
VRK1-203ENST00000555067 EIF3HO15372 352 aaKnown RBP eCLIP4.36□□□□□ -1.71
VRK1-203ENST00000555067 TAPBPO15533 448 aa4.36□□□□□ -1.71
VRK1-203ENST00000555067 PRKAB2O43741 272 aa4.36□□□□□ -1.71
VRK1-203ENST00000555067 CLDN9O95484 217 aa4.36□□□□□ -1.71
VRK1-203ENST00000555067 SEC24AO95486 1093 aa4.36□□□□□ -1.71
VRK1-203ENST00000555067 NGFP01138 241 aa4.36□□□□□ -1.71
VRK1-203ENST00000555067 H2BFMP0C1H6 154 aa4.36□□□□□ -1.71
VRK1-203ENST00000555067 RPL13AP40429 203 aaKnown RBP4.36□□□□□ -1.71
VRK1-203ENST00000555067 GYG1P46976 350 aa4.36□□□□□ -1.71
VRK1-203ENST00000555067 HLCSP50747 726 aa4.36□□□□□ -1.71
VRK1-203ENST00000555067 ABCE1P61221 599 aaKnown RBP4.36□□□□□ -1.71
VRK1-203ENST00000555067 RGS1Q08116 209 aa4.36□□□□□ -1.71
VRK1-203ENST00000555067 PPP1R3AQ16821 1122 aa4.36□□□□□ -1.71
VRK1-203ENST00000555067 ZNF829Q3KNS6 432 aaPredicted RBP4.36□□□□□ -1.71
VRK1-203ENST00000555067 SCYL2Q6P3W7 929 aa4.36□□□□□ -1.71
VRK1-203ENST00000555067 ZNF613Q6PF04 617 aa4.36□□□□□ -1.71
VRK1-203ENST00000555067 HSDL2Q6YN16 418 aa4.36□□□□□ -1.71
VRK1-203ENST00000555067 SSX9Q7RTT3 188 aa4.36□□□□□ -1.71
VRK1-203ENST00000555067 HSD11B1LQ7Z5J1 315 aa4.36□□□□□ -1.71
VRK1-203ENST00000555067 P2RY8Q86VZ1 359 aa4.36□□□□□ -1.71
VRK1-203ENST00000555067 SPATA24Q86W54 205 aa4.36□□□□□ -1.71
VRK1-203ENST00000555067 RNF130Q86XS8 419 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms