RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 CPPED1Q9BRF8 314 aaPredicted RBP9.6□□□□□ -0.87
TMEM260-206ENST00000555046 UGT2B28Q9BY64 529 aa9.6□□□□□ -0.87
TMEM260-206ENST00000555046 RTN4RQ9BZR6 473 aa9.6□□□□□ -0.87
TMEM260-206ENST00000555046 MYLK2Q9H1R3 596 aa9.6□□□□□ -0.87
TMEM260-206ENST00000555046 KAT8Q9H7Z6 458 aaKnown RBP9.6□□□□□ -0.87
TMEM260-206ENST00000555046 CALHM2Q9HA72 323 aa9.6□□□□□ -0.87
TMEM260-206ENST00000555046 TIGARQ9NQ88 270 aa9.6□□□□□ -0.87
TMEM260-206ENST00000555046 MED17Q9NVC6 651 aa9.6□□□□□ -0.87
TMEM260-206ENST00000555046 NDE1Q9NXR1 346 aa9.6□□□□□ -0.87
TMEM260-206ENST00000555046 COQ3Q9NZJ6 369 aa9.6□□□□□ -0.87
TMEM260-206ENST00000555046 SLC13A4Q9UKG4 626 aa9.6□□□□□ -0.87
TMEM260-206ENST00000555046 ICAM5Q9UMF0 924 aa9.6□□□□□ -0.87
TMEM260-206ENST00000555046 RPH3AQ9Y2J0 694 aaPredicted RBP9.6□□□□□ -0.87
TMEM260-206ENST00000555046 SLC6A5Q9Y345 797 aa9.6□□□□□ -0.87
TMEM260-206ENST00000555046 L3MBTL1Q9Y468 752 aa9.6□□□□□ -0.87
TMEM260-206ENST00000555046 FN1P02751 2386 aaKnown RBP9.6□□□□□ -0.87
TMEM260-206ENST00000555046 NUP214P35658 2090 aaPredicted RBP9.6□□□□□ -0.87
TMEM260-206ENST00000555046 STAB1Q9NY15 2570 aa9.59□□□□□ -0.87
TMEM260-206ENST00000555046 NPIPA5A0A0B4J1W7 369 aa9.59□□□□□ -0.87
TMEM260-206ENST00000555046 NPIPA7E9PJI5 369 aa9.59□□□□□ -0.87
TMEM260-206ENST00000555046 AIM2O14862 343 aa9.59□□□□□ -0.87
TMEM260-206ENST00000555046 SHOX2O60902 331 aaPredicted RBP9.59□□□□□ -0.87
TMEM260-206ENST00000555046 CLDN1O95832 211 aa9.59□□□□□ -0.87
TMEM260-206ENST00000555046 EPPINO95925 133 aa9.59□□□□□ -0.87
TMEM260-206ENST00000555046 UBTFL6P0CB48 400 aaPredicted RBP9.59□□□□□ -0.87
TMEM260-206ENST00000555046 NPIPA8P0DM63 369 aa9.59□□□□□ -0.87
TMEM260-206ENST00000555046 ARAFP10398 606 aa9.59□□□□□ -0.87
TMEM260-206ENST00000555046 HOXB4P17483 251 aaPredicted RBP9.59□□□□□ -0.87
TMEM260-206ENST00000555046 PGM1P36871 562 aa9.59□□□□□ -0.87
TMEM260-206ENST00000555046 HTR3AP46098 478 aa9.59□□□□□ -0.87
TMEM260-206ENST00000555046 CCR4P51679 360 aa9.59□□□□□ -0.87
TMEM260-206ENST00000555046 RAC1P63000 192 aa9.59□□□□□ -0.87
TMEM260-206ENST00000555046 ZNF117Q03924 483 aa9.59□□□□□ -0.87
TMEM260-206ENST00000555046 CRYZQ08257 329 aaKnown RBP9.59□□□□□ -0.87
TMEM260-206ENST00000555046 FUT5Q11128 374 aa9.59□□□□□ -0.87
TMEM260-206ENST00000555046 SCARB2Q14108 478 aa9.59□□□□□ -0.87
TMEM260-206ENST00000555046 ZNF311Q5JNZ3 666 aa9.59□□□□□ -0.87
TMEM260-206ENST00000555046 HACD2Q6Y1H2 254 aa9.59□□□□□ -0.87
TMEM260-206ENST00000555046 FGD2Q7Z6J4 655 aa9.59□□□□□ -0.87
TMEM260-206ENST00000555046 PATL1Q86TB9 770 aaKnown RBP9.59□□□□□ -0.87
TMEM260-206ENST00000555046 GRAMD2AQ8IUY3 354 aa9.59□□□□□ -0.87
TMEM260-206ENST00000555046 CHERPQ8IWX8 916 aaKnown RBP9.59□□□□□ -0.87
TMEM260-206ENST00000555046 TNIP2Q8NFZ5 429 aa9.59□□□□□ -0.87
TMEM260-206ENST00000555046 OR5M9Q8NGP3 310 aa9.59□□□□□ -0.87
TMEM260-206ENST00000555046 OR10A6Q8NH74 314 aa9.59□□□□□ -0.87
TMEM260-206ENST00000555046 ZNF563Q8TA94 476 aa9.59□□□□□ -0.87
TMEM260-206ENST00000555046 GPR119Q8TDV5 335 aa9.59□□□□□ -0.87
TMEM260-206ENST00000555046 ASB5Q8WWX0 329 aa9.59□□□□□ -0.87
TMEM260-206ENST00000555046 ST8SIA1Q92185 356 aa9.59□□□□□ -0.87
TMEM260-206ENST00000555046 ZG16BQ96DA0 208 aa9.59□□□□□ -0.87
TMEM260-206ENST00000555046 PRDM14Q9GZV8 571 aa9.59□□□□□ -0.87
TMEM260-206ENST00000555046 PNPLA3Q9NST1 481 aa9.59□□□□□ -0.87
TMEM260-206ENST00000555046 KLHL28Q9NXS3 571 aa9.59□□□□□ -0.87
TMEM260-206ENST00000555046 SH3BGRL2Q9UJC5 107 aa9.59□□□□□ -0.87
TMEM260-206ENST00000555046 TINAGQ9UJW2 476 aa9.59□□□□□ -0.87
TMEM260-206ENST00000555046 CAMK2AQ9UQM7 478 aa9.59□□□□□ -0.87
TMEM260-206ENST00000555046 LIPGQ9Y5X9 500 aa9.59□□□□□ -0.87
TMEM260-206ENST00000555046 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.58□□□□□ -0.88
TMEM260-206ENST00000555046 OR2M5A3KFT3 312 aa9.58□□□□□ -0.88
TMEM260-206ENST00000555046 PRAMEF27A3QJZ7 478 aa9.58□□□□□ -0.88
TMEM260-206ENST00000555046 CFAP73A6NFT4 308 aa9.58□□□□□ -0.88
TMEM260-206ENST00000555046 H0Y3Z8 333 aa9.58□□□□□ -0.88
TMEM260-206ENST00000555046 FAAHO00519 579 aa9.58□□□□□ -0.88
TMEM260-206ENST00000555046 ADAM10O14672 748 aa9.58□□□□□ -0.88
TMEM260-206ENST00000555046 GMFGO60234 142 aa9.58□□□□□ -0.88
TMEM260-206ENST00000555046 DNAJA2O60884 412 aa9.58□□□□□ -0.88
TMEM260-206ENST00000555046 IL2RAP01589 272 aa9.58□□□□□ -0.88
TMEM260-206ENST00000555046 NUDT7P0C024 238 aa9.58□□□□□ -0.88
TMEM260-206ENST00000555046 RPS4Y1P22090 263 aaKnown RBP9.58□□□□□ -0.88
TMEM260-206ENST00000555046 ELK4P28324 431 aa9.58□□□□□ -0.88
TMEM260-206ENST00000555046 PRKAR1BP31321 381 aa9.58□□□□□ -0.88
TMEM260-206ENST00000555046 APOBEC1P41238 236 aaKnown RBP9.58□□□□□ -0.88
TMEM260-206ENST00000555046 MTPNP58546 118 aa9.58□□□□□ -0.88
TMEM260-206ENST00000555046 SRYQ05066 204 aa9.58□□□□□ -0.88
TMEM260-206ENST00000555046 SKP2Q13309 424 aa9.58□□□□□ -0.88
TMEM260-206ENST00000555046 VEZF1Q14119 521 aa9.58□□□□□ -0.88
TMEM260-206ENST00000555046 CAPRIN1Q14444 709 aaKnown RBP9.58□□□□□ -0.88
TMEM260-206ENST00000555046 MAPK14Q16539 360 aa9.58□□□□□ -0.88
TMEM260-206ENST00000555046 PLPPR5Q32ZL2 321 aa9.58□□□□□ -0.88
TMEM260-206ENST00000555046 C1orf185Q5T7R7 199 aa9.58□□□□□ -0.88
TMEM260-206ENST00000555046 NSUN5P2Q63ZY6 315 aa9.58□□□□□ -0.88
TMEM260-206ENST00000555046 GTF2IRD2BQ6EKJ0 949 aa9.58□□□□□ -0.88
TMEM260-206ENST00000555046 CBLN3Q6UW01 205 aa9.58□□□□□ -0.88
TMEM260-206ENST00000555046 ARSKQ6UWY0 536 aa9.58□□□□□ -0.88
TMEM260-206ENST00000555046 NET1Q7Z628 596 aaPredicted RBP9.58□□□□□ -0.88
TMEM260-206ENST00000555046 GTF2IRD2Q86UP8 949 aa9.58□□□□□ -0.88
TMEM260-206ENST00000555046 LACC1Q8IV20 430 aa9.58□□□□□ -0.88
TMEM260-206ENST00000555046 ULK2Q8IYT8 1036 aa9.58□□□□□ -0.88
TMEM260-206ENST00000555046 OR10Q1Q8NGQ4 319 aa9.58□□□□□ -0.88
TMEM260-206ENST00000555046 NFKBIDQ8NI38 313 aa9.58□□□□□ -0.88
TMEM260-206ENST00000555046 SLC26A7Q8TE54 656 aa9.58□□□□□ -0.88
TMEM260-206ENST00000555046 MAL2Q969L2 176 aa9.58□□□□□ -0.88
TMEM260-206ENST00000555046 RCN3Q96D15 328 aa9.58□□□□□ -0.88
TMEM260-206ENST00000555046 WDYHV1Q96HA8 205 aa9.58□□□□□ -0.88
TMEM260-206ENST00000555046 REXO5Q96IC2 774 aaKnown RBP9.58□□□□□ -0.88
TMEM260-206ENST00000555046 SPRR3Q9UBC9 169 aa9.58□□□□□ -0.88
TMEM260-206ENST00000555046 KCNE5Q9UJ90 142 aa9.58□□□□□ -0.88
TMEM260-206ENST00000555046 VDAC3Q9Y277 283 aa9.58□□□□□ -0.88
TMEM260-206ENST00000555046 ZNF337Q9Y3M9 751 aa9.58□□□□□ -0.88
TMEM260-206ENST00000555046 SPIN1Q9Y657 262 aaPredicted RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms