RNA–Protein interactions for RNA: ENST00000554995.1

PSEN1-211, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 592 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-211ENST00000554995 DHDDSQ86SQ9 333 aa4.27□□□□□ -1.73
PSEN1-211ENST00000554995 SLC47A2Q86VL8 602 aa4.27□□□□□ -1.73
PSEN1-211ENST00000554995 TPRA1Q86W33 373 aa4.27□□□□□ -1.73
PSEN1-211ENST00000554995 SLC35F2Q8IXU6 374 aa4.27□□□□□ -1.73
PSEN1-211ENST00000554995 MCOLN2Q8IZK6 566 aa4.27□□□□□ -1.73
PSEN1-211ENST00000554995 OR9K2Q8NGE7 335 aa4.27□□□□□ -1.73
PSEN1-211ENST00000554995 OR52K2Q8NGK3 314 aa4.27□□□□□ -1.73
PSEN1-211ENST00000554995 TFB1MQ8WVM0 346 aaKnown RBP4.27□□□□□ -1.73
PSEN1-211ENST00000554995 C10orf35Q96D05 121 aa4.27□□□□□ -1.73
PSEN1-211ENST00000554995 ZBED6CLQ96FA7 236 aaPredicted RBP4.27□□□□□ -1.73
PSEN1-211ENST00000554995 PPP1R16AQ96I34 528 aa4.27□□□□□ -1.73
PSEN1-211ENST00000554995 CELF6Q96J87 481 aaKnown RBP4.27□□□□□ -1.73
PSEN1-211ENST00000554995 CNOT6LQ96LI5 555 aaKnown RBP4.27□□□□□ -1.73
PSEN1-211ENST00000554995 NIPSNAP3BQ9BS92 247 aa4.27□□□□□ -1.73
PSEN1-211ENST00000554995 VCPKMTQ9H867 229 aa4.27□□□□□ -1.73
PSEN1-211ENST00000554995 PAK1IP1Q9NWT1 392 aaPredicted RBP4.27□□□□□ -1.73
PSEN1-211ENST00000554995 MDFICQ9P1T7 246 aa4.27□□□□□ -1.73
PSEN1-211ENST00000554995 ZNF639Q9UID6 485 aa4.27□□□□□ -1.73
PSEN1-211ENST00000554995 SAMD4AQ9UPU9 718 aaKnown RBP4.27□□□□□ -1.73
PSEN1-211ENST00000554995 IFT52Q9Y366 437 aa4.27□□□□□ -1.73
PSEN1-211ENST00000554995 TRAV9-2A0A087WT02 112 aa4.26□□□□□ -1.73
PSEN1-211ENST00000554995 A0A1W2PPR1 153 aa4.26□□□□□ -1.73
PSEN1-211ENST00000554995 EFCAB7A8K855 629 aa4.26□□□□□ -1.73
PSEN1-211ENST00000554995 E9PBE3 544 aa4.26□□□□□ -1.73
PSEN1-211ENST00000554995 E9PLD3 99 aa4.26□□□□□ -1.73
PSEN1-211ENST00000554995 SCRG1O75711 98 aa4.26□□□□□ -1.73
PSEN1-211ENST00000554995 DIRAS1O95057 198 aa4.26□□□□□ -1.73
PSEN1-211ENST00000554995 HOXD4P09016 255 aaPredicted RBP4.26□□□□□ -1.73
PSEN1-211ENST00000554995 HOXB6P17509 224 aaKnown RBP4.26□□□□□ -1.73
PSEN1-211ENST00000554995 HMGB2P26583 209 aaKnown RBP4.26□□□□□ -1.73
PSEN1-211ENST00000554995 RPL13AP40429 203 aaKnown RBP4.26□□□□□ -1.73
PSEN1-211ENST00000554995 ATP1B3P54709 279 aa4.26□□□□□ -1.73
PSEN1-211ENST00000554995 MS4A2Q01362 244 aa4.26□□□□□ -1.73
PSEN1-211ENST00000554995 MRPL28Q13084 256 aaKnown RBP4.26□□□□□ -1.73
PSEN1-211ENST00000554995 SSX2Q16385 188 aa4.26□□□□□ -1.73
PSEN1-211ENST00000554995 DPYSL2Q16555 572 aa4.26□□□□□ -1.73
PSEN1-211ENST00000554995 CTSL3PQ5NE16 218 aa4.26□□□□□ -1.73
PSEN1-211ENST00000554995 UQCC3Q6UW78 93 aa4.26□□□□□ -1.73
PSEN1-211ENST00000554995 ZNF497Q6ZNH5 498 aa4.26□□□□□ -1.73
PSEN1-211ENST00000554995 GPRIN3Q6ZVF9 776 aa4.26□□□□□ -1.73
PSEN1-211ENST00000554995 SLC25A42Q86VD7 318 aa4.26□□□□□ -1.73
PSEN1-211ENST00000554995 CDR2LQ86X02 465 aaPredicted RBP4.26□□□□□ -1.73
PSEN1-211ENST00000554995 BBS5Q8N3I7 341 aa4.26□□□□□ -1.73
PSEN1-211ENST00000554995 SLC2A14Q8TDB8 520 aa4.26□□□□□ -1.73
PSEN1-211ENST00000554995 MAIP1Q8WWC4 291 aa4.26□□□□□ -1.73
PSEN1-211ENST00000554995 RASD2Q96D21 266 aa4.26□□□□□ -1.73
PSEN1-211ENST00000554995 ZNF599Q96NL3 588 aa4.26□□□□□ -1.73
PSEN1-211ENST00000554995 CHRDL1Q9BU40 450 aa4.26□□□□□ -1.73
PSEN1-211ENST00000554995 GLT8D2Q9H1C3 349 aa4.26□□□□□ -1.73
PSEN1-211ENST00000554995 A0A0J9YWU9 116 aa4.25□□□□□ -1.73
PSEN1-211ENST00000554995 ACOD1A6NK06 481 aa4.25□□□□□ -1.73
PSEN1-211ENST00000554995 FAM220BPB1ANY3 271 aa4.25□□□□□ -1.73
PSEN1-211ENST00000554995 F5H6K3 240 aa4.25□□□□□ -1.73
PSEN1-211ENST00000554995 POLR2DO15514 142 aaKnown RBP4.25□□□□□ -1.73
PSEN1-211ENST00000554995 PRKAB2O43741 272 aa4.25□□□□□ -1.73
PSEN1-211ENST00000554995 GALR3O60755 368 aaPredicted RBP4.25□□□□□ -1.73
PSEN1-211ENST00000554995 ZNF253O75346 499 aa4.25□□□□□ -1.73
PSEN1-211ENST00000554995 UGT2B17O75795 530 aa4.25□□□□□ -1.73
PSEN1-211ENST00000554995 NOL4O94818 638 aa4.25□□□□□ -1.73
PSEN1-211ENST00000554995 KBTBD11O94819 623 aa4.25□□□□□ -1.73
PSEN1-211ENST00000554995 GJB5O95377 273 aa4.25□□□□□ -1.73
PSEN1-211ENST00000554995 PIGRP01833 764 aa4.25□□□□□ -1.73
PSEN1-211ENST00000554995 IGHG4P01861 327 aa4.25□□□□□ -1.73
PSEN1-211ENST00000554995 CCDC130P13994 396 aa4.25□□□□□ -1.73
PSEN1-211ENST00000554995 POLR2EP19388 210 aaKnown RBP4.25□□□□□ -1.73
PSEN1-211ENST00000554995 GCAP28676 217 aa4.25□□□□□ -1.73
PSEN1-211ENST00000554995 UGT1A5P35504 534 aa4.25□□□□□ -1.73
PSEN1-211ENST00000554995 ELK3P41970 407 aa4.25□□□□□ -1.73
PSEN1-211ENST00000554995 DUSP3P51452 185 aaPredicted RBP4.25□□□□□ -1.73
PSEN1-211ENST00000554995 KLRC3Q07444 240 aa4.25□□□□□ -1.73
PSEN1-211ENST00000554995 KLRB1Q12918 225 aa4.25□□□□□ -1.73
PSEN1-211ENST00000554995 C14orf177Q52M58 125 aa4.25□□□□□ -1.73
PSEN1-211ENST00000554995 HSP90AB3PQ58FF7 597 aa4.25□□□□□ -1.73
PSEN1-211ENST00000554995 UFSP1Q6NVU6 142 aa4.25□□□□□ -1.73
PSEN1-211ENST00000554995 METAP1DQ6UB28 335 aaPredicted RBP4.25□□□□□ -1.73
PSEN1-211ENST00000554995 HIPK1Q86Z02 1210 aa4.25□□□□□ -1.73
PSEN1-211ENST00000554995 C9orf40Q8IXQ3 194 aa4.25□□□□□ -1.73
PSEN1-211ENST00000554995 ALLCQ8N6M5 410 aa4.25□□□□□ -1.73
PSEN1-211ENST00000554995 ATP6V0D2Q8N8Y2 350 aa4.25□□□□□ -1.73
PSEN1-211ENST00000554995 CATSPER1Q8NEC5 780 aa4.25□□□□□ -1.73
PSEN1-211ENST00000554995 C17orf47Q8NEP4 570 aa4.25□□□□□ -1.73
PSEN1-211ENST00000554995 ZNF689Q96CS4 500 aaPredicted RBP4.25□□□□□ -1.73
PSEN1-211ENST00000554995 CYP2S1Q96SQ9 504 aa4.25□□□□□ -1.73
PSEN1-211ENST00000554995 VGLL1Q99990 258 aa4.25□□□□□ -1.73
PSEN1-211ENST00000554995 SLC35A5Q9BS91 424 aa4.25□□□□□ -1.73
PSEN1-211ENST00000554995 PNNQ9H307 717 aaKnown RBP4.25□□□□□ -1.73
PSEN1-211ENST00000554995 CAB39LQ9H9S4 337 aa4.25□□□□□ -1.73
PSEN1-211ENST00000554995 POPDC2Q9HBU9 364 aa4.25□□□□□ -1.73
PSEN1-211ENST00000554995 ZFP14Q9HCL3 533 aa4.25□□□□□ -1.73
PSEN1-211ENST00000554995 SENP1Q9P0U3 644 aa4.25□□□□□ -1.73
PSEN1-211ENST00000554995 RIMS3Q9UJD0 308 aa4.25□□□□□ -1.73
PSEN1-211ENST00000554995 RPAP1Q9BWH6 1393 aaPredicted RBP4.25□□□□□ -1.73
PSEN1-211ENST00000554995 LOC100131303A0A0U1RQF7 123 aa4.24□□□□□ -1.73
PSEN1-211ENST00000554995 E9PQ18 207 aa4.24□□□□□ -1.73
PSEN1-211ENST00000554995 LATO43561 262 aa4.24□□□□□ -1.73
PSEN1-211ENST00000554995 RAMP3O60896 148 aa4.24□□□□□ -1.73
PSEN1-211ENST00000554995 SH3BGRLO75368 114 aa4.24□□□□□ -1.73
PSEN1-211ENST00000554995 NF2P35240 595 aa4.24□□□□□ -1.73
PSEN1-211ENST00000554995 HLCSP50747 726 aa4.24□□□□□ -1.73
PSEN1-211ENST00000554995 PRMT2P55345 433 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms