RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 A0A075B6Q4 140 aa16.04■□□□□ 0.16
SHOX-204ENST00000554971 A0A1W2PR48 441 aa16.04■□□□□ 0.16
SHOX-204ENST00000554971 IDSB3KWA1 339 aa16.04■□□□□ 0.16
SHOX-204ENST00000554971 TGFBR3LH3BV60 316 aa16.04■□□□□ 0.16
SHOX-204ENST00000554971 RRP8O43159 456 aaKnown RBP16.04■□□□□ 0.16
SHOX-204ENST00000554971 PROM1O43490 865 aa16.04■□□□□ 0.16
SHOX-204ENST00000554971 ENTPD6O75354 484 aa16.04■□□□□ 0.16
SHOX-204ENST00000554971 UPK1BO75841 260 aa16.04■□□□□ 0.16
SHOX-204ENST00000554971 AGR2O95994 175 aa16.04■□□□□ 0.16
SHOX-204ENST00000554971 IFNA8P32881 189 aa16.04■□□□□ 0.16
SHOX-204ENST00000554971 PSMD7P51665 324 aa16.04■□□□□ 0.16
SHOX-204ENST00000554971 BTG2P78543 158 aa16.04■□□□□ 0.16
SHOX-204ENST00000554971 AGAP7PQ5VUJ5 663 aa16.04■□□□□ 0.16
SHOX-204ENST00000554971 ATCAYQ86WG3 371 aa16.04■□□□□ 0.16
SHOX-204ENST00000554971 ADAMTS17Q8TE56 1095 aa16.04■□□□□ 0.16
SHOX-204ENST00000554971 CDADC1Q9BWV3 514 aa16.04■□□□□ 0.16
SHOX-204ENST00000554971 RSPO3Q9BXY4 272 aaPredicted RBP16.04■□□□□ 0.16
SHOX-204ENST00000554971 FAM117AQ9C073 453 aa16.04■□□□□ 0.16
SHOX-204ENST00000554971 C14orf105Q9NVL8 296 aa16.04■□□□□ 0.16
SHOX-204ENST00000554971 CHCHD3Q9NX63 227 aaKnown RBP16.04■□□□□ 0.16
SHOX-204ENST00000554971 CRNNQ9UBG3 495 aaPredicted RBP16.04■□□□□ 0.16
SHOX-204ENST00000554971 NXT1Q9UKK6 140 aaKnown RBP16.04■□□□□ 0.16
SHOX-204ENST00000554971 MKL2Q9ULH7 1088 aa16.04■□□□□ 0.16
SHOX-204ENST00000554971 ZMIZ1Q9ULJ6 1067 aa16.04■□□□□ 0.16
SHOX-204ENST00000554971 H3BN98 237 aa16.03■□□□□ 0.16
SHOX-204ENST00000554971 NKX2-8O15522 239 aa16.03■□□□□ 0.16
SHOX-204ENST00000554971 IFITM3Q01628 133 aa16.03■□□□□ 0.16
SHOX-204ENST00000554971 MED22Q15528 200 aa16.03■□□□□ 0.16
SHOX-204ENST00000554971 MINDY4Q4G0A6 757 aa16.03■□□□□ 0.16
SHOX-204ENST00000554971 PODNL1Q6PEZ8 512 aa16.03■□□□□ 0.16
SHOX-204ENST00000554971 TOR1AIP2Q8NFQ8 470 aa16.03■□□□□ 0.16
SHOX-204ENST00000554971 OR4D11Q8NGI4 311 aa16.03■□□□□ 0.16
SHOX-204ENST00000554971 VANGL1Q8TAA9 524 aaPredicted RBP16.03■□□□□ 0.16
SHOX-204ENST00000554971 NEURL2Q9BR09 285 aa16.03■□□□□ 0.16
SHOX-204ENST00000554971 DUXAA6NLW8 204 aa16.02■□□□□ 0.16
SHOX-204ENST00000554971 AIFM1O95831 613 aa16.02■□□□□ 0.16
SHOX-204ENST00000554971 TNFRSF17Q02223 184 aa16.02■□□□□ 0.16
SHOX-204ENST00000554971 C1DQ13901 141 aaKnown RBP16.02■□□□□ 0.16
SHOX-204ENST00000554971 TSLPQ969D9 159 aa16.02■□□□□ 0.16
SHOX-204ENST00000554971 CRB3Q9BUF7 120 aa16.02■□□□□ 0.16
SHOX-204ENST00000554971 OR51E2Q9H255 320 aa16.02■□□□□ 0.16
SHOX-204ENST00000554971 MRPS18AQ9NVS2 196 aaKnown RBP16.02■□□□□ 0.16
SHOX-204ENST00000554971 SEC14L4Q9UDX3 406 aa16.02■□□□□ 0.16
SHOX-204ENST00000554971 LSM2Q9Y333 95 aaKnown RBP16.02■□□□□ 0.16
SHOX-204ENST00000554971 ZNF780BQ9Y6R6 833 aa16.02■□□□□ 0.16
SHOX-204ENST00000554971 HMGN2P05204 90 aaKnown RBP16.02■□□□□ 0.15
SHOX-204ENST00000554971 HSMCR30P0CW71 290 aa16.02■□□□□ 0.15
SHOX-204ENST00000554971 DBTP11182 482 aaKnown RBP16.02■□□□□ 0.15
SHOX-204ENST00000554971 MAOAP21397 527 aa16.02■□□□□ 0.15
SHOX-204ENST00000554971 FUT4P22083 530 aa16.02■□□□□ 0.15
SHOX-204ENST00000554971 FOLR3P41439 243 aa16.02■□□□□ 0.15
SHOX-204ENST00000554971 GIPRP48546 466 aa16.02■□□□□ 0.15
SHOX-204ENST00000554971 PCYT1AP49585 367 aa16.02■□□□□ 0.15
SHOX-204ENST00000554971 COPZ1P61923 177 aa16.02■□□□□ 0.15
SHOX-204ENST00000554971 CDK5Q00535 292 aa16.02■□□□□ 0.15
SHOX-204ENST00000554971 PIN1Q13526 163 aaPredicted RBP16.02■□□□□ 0.15
SHOX-204ENST00000554971 SPHARQ15513 63 aa16.02■□□□□ 0.15
SHOX-204ENST00000554971 KLHL22Q53GT1 634 aa16.02■□□□□ 0.15
SHOX-204ENST00000554971 LANCL3Q6ZV70 420 aa16.02■□□□□ 0.15
SHOX-204ENST00000554971 RBM45Q8IUH3 476 aaKnown RBP16.02■□□□□ 0.15
SHOX-204ENST00000554971 OR4K5Q8NGD3 323 aa16.02■□□□□ 0.15
SHOX-204ENST00000554971 OR9Q1Q8NGQ5 310 aa16.02■□□□□ 0.15
SHOX-204ENST00000554971 CNRIP1Q96F85 164 aaPredicted RBP16.02■□□□□ 0.15
SHOX-204ENST00000554971 FAM210AQ96ND0 272 aa16.02■□□□□ 0.15
SHOX-204ENST00000554971 PRRG3Q9BZD7 231 aa16.02■□□□□ 0.15
SHOX-204ENST00000554971 NTMQ9P121 344 aa16.02■□□□□ 0.15
SHOX-204ENST00000554971 HS3ST3B1Q9Y662 390 aa16.02■□□□□ 0.15
SHOX-204ENST00000554971 IGKV3D-11A0A0A0MRZ8 115 aa16.01■□□□□ 0.15
SHOX-204ENST00000554971 LOC100506127A0A0U1RQW1 187 aa16.01■□□□□ 0.15
SHOX-204ENST00000554971 GLOD5A6NK44 160 aa16.01■□□□□ 0.15
SHOX-204ENST00000554971 LOC110117498-PIK3R3F6TDL0 507 aa16.01■□□□□ 0.15
SHOX-204ENST00000554971 PGRMC2O15173 223 aa16.01■□□□□ 0.15
SHOX-204ENST00000554971 ERAL1O75616 437 aaKnown RBP16.01■□□□□ 0.15
SHOX-204ENST00000554971 TP53P04637 393 aaPredicted RBP16.01■□□□□ 0.15
SHOX-204ENST00000554971 CHRM4P08173 479 aa16.01■□□□□ 0.15
SHOX-204ENST00000554971 CPN2P22792 545 aa16.01■□□□□ 0.15
SHOX-204ENST00000554971 SMSP52788 366 aa16.01■□□□□ 0.15
SHOX-204ENST00000554971 EFNB1P98172 346 aa16.01■□□□□ 0.15
SHOX-204ENST00000554971 TSTQ16762 297 aaKnown RBP16.01■□□□□ 0.15
SHOX-204ENST00000554971 ATAD3BQ5T9A4 648 aa16.01■□□□□ 0.15
SHOX-204ENST00000554971 QSOX2Q6ZRP7 698 aa16.01■□□□□ 0.15
SHOX-204ENST00000554971 PPP1R32Q7Z5V6 425 aa16.01■□□□□ 0.15
SHOX-204ENST00000554971 MRGPREQ86SM8 312 aa16.01■□□□□ 0.15
SHOX-204ENST00000554971 NANOGP1Q8N7R0 232 aa16.01■□□□□ 0.15
SHOX-204ENST00000554971 MORN4Q8NDC4 146 aa16.01■□□□□ 0.15
SHOX-204ENST00000554971 OR5D16Q8NGK9 328 aa16.01■□□□□ 0.15
SHOX-204ENST00000554971 GNPDA2Q8TDQ7 276 aa16.01■□□□□ 0.15
SHOX-204ENST00000554971 PIK3R3Q92569 461 aa16.01■□□□□ 0.15
SHOX-204ENST00000554971 OR5M11Q96RB7 305 aa16.01■□□□□ 0.15
SHOX-204ENST00000554971 IL4I1Q96RQ9 567 aa16.01■□□□□ 0.15
SHOX-204ENST00000554971 CHCHD6Q9BRQ6 235 aa16.01■□□□□ 0.15
SHOX-204ENST00000554971 SLC13A4Q9UKG4 626 aa16.01■□□□□ 0.15
SHOX-204ENST00000554971 DIMT1Q9UNQ2 313 aaKnown RBP16.01■□□□□ 0.15
SHOX-204ENST00000554971 SPTA1P02549 2419 aa16.01■□□□□ 0.15
SHOX-204ENST00000554971 A0A1W2PS29 197 aa16■□□□□ 0.15
SHOX-204ENST00000554971 LDB3O75112 727 aa16■□□□□ 0.15
SHOX-204ENST00000554971 CD63P08962 238 aa16■□□□□ 0.15
SHOX-204ENST00000554971 IMPDH2P12268 514 aa16■□□□□ 0.15
SHOX-204ENST00000554971 MMP11P24347 488 aa16■□□□□ 0.15
SHOX-204ENST00000554971 PSMA1P25786 263 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms