RNA–Protein interactions for RNA: ENST00000554813.5

APEX1-208, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-208ENST00000554813 A0A1W2PP18 115 aa11.9□□□□□ -0.5
APEX1-208ENST00000554813 AGAP5A6NIR3 686 aa11.9□□□□□ -0.5
APEX1-208ENST00000554813 EEF1E1-BLOC1S5C9J1V9 151 aa11.9□□□□□ -0.5
APEX1-208ENST00000554813 EEF1E1O43324 174 aaKnown RBP11.9□□□□□ -0.5
APEX1-208ENST00000554813 DNAJA2O60884 412 aa11.9□□□□□ -0.5
APEX1-208ENST00000554813 SYNGR4O95473 234 aa11.9□□□□□ -0.5
APEX1-208ENST00000554813 OPN1LWP04000 364 aa11.9□□□□□ -0.5
APEX1-208ENST00000554813 DBIP07108 87 aaKnown RBP11.9□□□□□ -0.5
APEX1-208ENST00000554813 CHRM4P08173 479 aa11.9□□□□□ -0.5
APEX1-208ENST00000554813 VIMP08670 466 aaKnown RBP11.9□□□□□ -0.5
APEX1-208ENST00000554813 TFPTP0C1Z6 253 aa11.9□□□□□ -0.5
APEX1-208ENST00000554813 IL7RP16871 459 aa11.9□□□□□ -0.5
APEX1-208ENST00000554813 PPIBP23284 216 aaKnown RBP11.9□□□□□ -0.5
APEX1-208ENST00000554813 SSTR2P30874 369 aa11.9□□□□□ -0.5
APEX1-208ENST00000554813 PGM1P36871 562 aa11.9□□□□□ -0.5
APEX1-208ENST00000554813 SLC6A8P48029 635 aa11.9□□□□□ -0.5
APEX1-208ENST00000554813 CRISP3P54108 245 aa11.9□□□□□ -0.5
APEX1-208ENST00000554813 CARD18P57730 90 aa11.9□□□□□ -0.5
APEX1-208ENST00000554813 FADDQ13158 208 aa11.9□□□□□ -0.5
APEX1-208ENST00000554813 RGNQ15493 299 aa11.9□□□□□ -0.5
APEX1-208ENST00000554813 FBXL19-AS1Q494R0 122 aa11.9□□□□□ -0.5
APEX1-208ENST00000554813 GTDC1Q4AE62 458 aa11.9□□□□□ -0.5
APEX1-208ENST00000554813 SLC25A53Q5H9E4 307 aa11.9□□□□□ -0.5
APEX1-208ENST00000554813 LRIF1Q5T3J3 769 aa11.9□□□□□ -0.5
APEX1-208ENST00000554813 HBMQ6B0K9 141 aa11.9□□□□□ -0.5
APEX1-208ENST00000554813 KIF18BQ86Y91 864 aa11.9□□□□□ -0.5
APEX1-208ENST00000554813 PEX5LQ8IYB4 626 aa11.9□□□□□ -0.5
APEX1-208ENST00000554813 GCNT2Q8N0V5 402 aa11.9□□□□□ -0.5
APEX1-208ENST00000554813 OR10D3Q8NH80 312 aa11.9□□□□□ -0.5
APEX1-208ENST00000554813 OR2V1Q8NHB1 315 aa11.9□□□□□ -0.5
APEX1-208ENST00000554813 FNDC9Q8TBE3 224 aa11.9□□□□□ -0.5
APEX1-208ENST00000554813 SLC38A5Q8WUX1 472 aa11.9□□□□□ -0.5
APEX1-208ENST00000554813 ST8SIA1Q92185 356 aa11.9□□□□□ -0.5
APEX1-208ENST00000554813 FIG4Q92562 907 aa11.9□□□□□ -0.5
APEX1-208ENST00000554813 OSTF1Q92882 214 aa11.9□□□□□ -0.5
APEX1-208ENST00000554813 AURKBQ96GD4 344 aaPredicted RBP11.9□□□□□ -0.5
APEX1-208ENST00000554813 ZNF845Q96IR2 970 aaPredicted RBP11.9□□□□□ -0.5
APEX1-208ENST00000554813 TRIM8Q9BZR9 551 aa11.9□□□□□ -0.5
APEX1-208ENST00000554813 QRSL1Q9H0R6 528 aaKnown RBP11.9□□□□□ -0.5
APEX1-208ENST00000554813 TMEM185BQ9H7F4 350 aa11.9□□□□□ -0.5
APEX1-208ENST00000554813 CACYBPQ9HB71 228 aaKnown RBP11.9□□□□□ -0.5
APEX1-208ENST00000554813 SLC52A3Q9NQ40 469 aa11.9□□□□□ -0.5
APEX1-208ENST00000554813 EXOSC3Q9NQT5 275 aaKnown RBP11.9□□□□□ -0.5
APEX1-208ENST00000554813 SERINC1Q9NRX5 453 aa11.9□□□□□ -0.5
APEX1-208ENST00000554813 MRGBPQ9NV56 204 aa11.9□□□□□ -0.5
APEX1-208ENST00000554813 MCTS1Q9ULC4 181 aaKnown RBP11.9□□□□□ -0.5
APEX1-208ENST00000554813 HCFC1P51610 2035 aa11.89□□□□□ -0.51
APEX1-208ENST00000554813 A0A0G2JPF8 293 aa11.89□□□□□ -0.51
APEX1-208ENST00000554813 A0A0J9YW62 118 aa11.89□□□□□ -0.51
APEX1-208ENST00000554813 A0A1W2PNV4 684 aa11.89□□□□□ -0.51
APEX1-208ENST00000554813 HNRNPCL2B2RXH8 293 aa11.89□□□□□ -0.51
APEX1-208ENST00000554813 HNRNPCL3B7ZW38 293 aa11.89□□□□□ -0.51
APEX1-208ENST00000554813 ETV2O00321 342 aaPredicted RBP11.89□□□□□ -0.51
APEX1-208ENST00000554813 TNFSF11O14788 317 aa11.89□□□□□ -0.51
APEX1-208ENST00000554813 EFNA2O43921 213 aa11.89□□□□□ -0.51
APEX1-208ENST00000554813 HNRNPCL1O60812 293 aaKnown RBP11.89□□□□□ -0.51
APEX1-208ENST00000554813 NTN1O95631 604 aa11.89□□□□□ -0.51
APEX1-208ENST00000554813 HNRNPCL4P0DMR1 293 aa11.89□□□□□ -0.51
APEX1-208ENST00000554813 PRF1P14222 555 aa11.89□□□□□ -0.51
APEX1-208ENST00000554813 CAPN3P20807 821 aa11.89□□□□□ -0.51
APEX1-208ENST00000554813 SFTPDP35247 375 aa11.89□□□□□ -0.51
APEX1-208ENST00000554813 DLX5P56178 289 aa11.89□□□□□ -0.51
APEX1-208ENST00000554813 SESN3P58005 492 aa11.89□□□□□ -0.51
APEX1-208ENST00000554813 GUCY1A3Q02108 690 aa11.89□□□□□ -0.51
APEX1-208ENST00000554813 TMEM176BQ3YBM2 270 aaPredicted RBP11.89□□□□□ -0.51
APEX1-208ENST00000554813 PAGE3Q5JUK9 113 aa11.89□□□□□ -0.51
APEX1-208ENST00000554813 GTF2IRD2BQ6EKJ0 949 aa11.89□□□□□ -0.51
APEX1-208ENST00000554813 PPP4R4Q6NUP7 873 aa11.89□□□□□ -0.51
APEX1-208ENST00000554813 HMGN2P46Q86SG4 172 aa11.89□□□□□ -0.51
APEX1-208ENST00000554813 GTF2IRD2Q86UP8 949 aa11.89□□□□□ -0.51
APEX1-208ENST00000554813 ZNF295-AS1Q8N0V1 137 aa11.89□□□□□ -0.51
APEX1-208ENST00000554813 CNEP1R1Q8N9A8 125 aa11.89□□□□□ -0.51
APEX1-208ENST00000554813 FAM71CQ8NEG0 241 aa11.89□□□□□ -0.51
APEX1-208ENST00000554813 ATP6V1C2Q8NEY4 427 aa11.89□□□□□ -0.51
APEX1-208ENST00000554813 ZNF563Q8TA94 476 aa11.89□□□□□ -0.51
APEX1-208ENST00000554813 TSPEARQ8WU66 669 aa11.89□□□□□ -0.51
APEX1-208ENST00000554813 WDR60Q8WVS4 1066 aa11.89□□□□□ -0.51
APEX1-208ENST00000554813 C14orf79Q96F83 325 aa11.89□□□□□ -0.51
APEX1-208ENST00000554813 REXO5Q96IC2 774 aaKnown RBP11.89□□□□□ -0.51
APEX1-208ENST00000554813 ADGRG7Q96K78 797 aa11.89□□□□□ -0.51
APEX1-208ENST00000554813 KLHL15Q96M94 604 aa11.89□□□□□ -0.51
APEX1-208ENST00000554813 TMEM120AQ9BXJ8 343 aa11.89□□□□□ -0.51
APEX1-208ENST00000554813 RNF122Q9H9V4 155 aa11.89□□□□□ -0.51
APEX1-208ENST00000554813 ACER3Q9NUN7 267 aa11.89□□□□□ -0.51
APEX1-208ENST00000554813 FGFR1OP2Q9NVK5 253 aa11.89□□□□□ -0.51
APEX1-208ENST00000554813 JKAMPQ9P055 326 aa11.89□□□□□ -0.51
APEX1-208ENST00000554813 KCNN3Q9UGI6 736 aa11.89□□□□□ -0.51
APEX1-208ENST00000554813 PACSIN3Q9UKS6 424 aa11.89□□□□□ -0.51
APEX1-208ENST00000554813 ZNF232Q9UNY5 417 aa11.89□□□□□ -0.51
APEX1-208ENST00000554813 CORO2BQ9UQ03 480 aa11.89□□□□□ -0.51
APEX1-208ENST00000554813 NDUFAF1Q9Y375 327 aa11.89□□□□□ -0.51
APEX1-208ENST00000554813 CACNA1DQ01668 2161 aa11.89□□□□□ -0.51
APEX1-208ENST00000554813 KIAA1549Q9HCM3 1950 aa11.88□□□□□ -0.51
APEX1-208ENST00000554813 EVPLLA8MZ36 301 aa11.88□□□□□ -0.51
APEX1-208ENST00000554813 ANGPT2O15123 496 aa11.88□□□□□ -0.51
APEX1-208ENST00000554813 CXCL13O43927 109 aa11.88□□□□□ -0.51
APEX1-208ENST00000554813 TNFSF13O75888 250 aa11.88□□□□□ -0.51
APEX1-208ENST00000554813 PLGP00747 810 aaPredicted RBP11.88□□□□□ -0.51
APEX1-208ENST00000554813 BCHEP06276 602 aa11.88□□□□□ -0.51
APEX1-208ENST00000554813 PABPC4LP0CB38 370 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms