RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 MPDZO75970 2070 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 UQCRHLA0A096LP55 91 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 A0A0G2JN53 185 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 A0A1W2PNV4 684 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 TCRBV7S3A2A0A539 114 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 FRG2CA6NGY1 282 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 MIF4GDA9UHW6 222 aaKnown RBP4.35□□□□□ -1.71
ATXN3-228ENST00000554592 C4orf51C9J302 202 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 AKR1B15C9JRZ8 316 aaPredicted RBP4.35□□□□□ -1.71
ATXN3-228ENST00000554592 ERI3O43414 337 aaKnown RBP4.35□□□□□ -1.71
ATXN3-228ENST00000554592 SPRY1O43609 319 aaPredicted RBP4.35□□□□□ -1.71
ATXN3-228ENST00000554592 LIASO43766 372 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 LDB3O75112 727 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 GUCY1B2O75343 617 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 TNFSF13O75888 250 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 PLAUP00749 431 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 POU2F1P14859 743 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 TBXA2RP21731 343 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 LMO1P25800 156 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 GSTM2P28161 218 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 CPOXP36551 454 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 MTNR1AP48039 350 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 SLC6A12P48065 614 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 PLA2G16P53816 162 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 RPS4XP62701 263 aaKnown RBP4.35□□□□□ -1.71
ATXN3-228ENST00000554592 RPP30P78346 268 aaKnown RBP4.35□□□□□ -1.71
ATXN3-228ENST00000554592 SARNPP82979 210 aaKnown RBP4.35□□□□□ -1.71
ATXN3-228ENST00000554592 CDK16Q00536 496 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 SRYQ05066 204 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 TGM3Q08188 693 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 DHX34Q14147 1143 aaKnown RBP4.35□□□□□ -1.71
ATXN3-228ENST00000554592 PRICKLE4Q2TBC4 344 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 AP5B1Q2VPB7 878 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 BEX5Q5H9J7 111 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 DCST1Q5T197 706 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 LIPNQ5VXI9 398 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 TIGD3Q6B0B8 471 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 ZNF470Q6ECI4 717 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 OR2A2Q6IF42 318 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 TRIM40Q6P9F5 258 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 TMIGD1Q6UXZ0 262 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 ZNF704Q6ZNC4 412 aaPredicted RBP4.35□□□□□ -1.71
ATXN3-228ENST00000554592 H1FNTQ75WM6 255 aaPredicted RBP4.35□□□□□ -1.71
ATXN3-228ENST00000554592 PEX26Q7Z412 305 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 C1QL2Q7Z5L3 287 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 KIAA1328Q86T90 577 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 TBC1D1Q86TI0 1168 aaPredicted RBP4.35□□□□□ -1.71
ATXN3-228ENST00000554592 PRUNE1Q86TP1 453 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 YRDCQ86U90 279 aaKnown RBP4.35□□□□□ -1.71
ATXN3-228ENST00000554592 THOC6Q86W42 341 aaKnown RBP4.35□□□□□ -1.71
ATXN3-228ENST00000554592 CNGA4Q8IV77 575 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 VSTM4Q8IW00 320 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 DENND6AQ8IWF6 608 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 UEVLDQ8IX04 471 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 C9orf40Q8IXQ3 194 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 LMNTD2Q8IXW0 634 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 CCDC170Q8IYT3 715 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 OR2L5Q8NG80 312 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 SPPL2AQ8TCT8 520 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 ROBO4Q8WZ75 1007 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 HDAC2Q92769 488 aaKnown RBP4.35□□□□□ -1.71
ATXN3-228ENST00000554592 ANKRD9Q96BM1 317 aaPredicted RBP4.35□□□□□ -1.71
ATXN3-228ENST00000554592 PGM2Q96G03 612 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 ZC3HAV1LQ96H79 300 aaKnown RBP4.35□□□□□ -1.71
ATXN3-228ENST00000554592 ART5Q96L15 291 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 RILPQ96NA2 401 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 DGAT2Q96PD7 388 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 KRT12Q99456 494 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 PIGQQ9BRB3 760 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 ROGDIQ9GZN7 287 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 NT5DC2Q9H857 520 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 LYRM4Q9HD34 91 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 Q9N2J8 555 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 FBXO6Q9NRD1 293 aaPredicted RBP4.35□□□□□ -1.71
ATXN3-228ENST00000554592 TAS2R13Q9NYV9 303 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 SLC25A10Q9UBX3 287 aaPredicted RBP4.35□□□□□ -1.71
ATXN3-228ENST00000554592 PTBP2Q9UKA9 531 aaKnown RBP4.35□□□□□ -1.71
ATXN3-228ENST00000554592 TFR2Q9UP52 801 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 LAMP3Q9UQV4 416 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 SLC22A14Q9Y267 594 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 WIF1Q9Y5W5 379 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 SPACA6W5XKT8 324 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 DNAJC13O75165 2243 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 ZNF407Q9C0G0 2248 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 ARID1AO14497 2285 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 TLN2Q9Y4G6 2542 aa4.35□□□□□ -1.71
ATXN3-228ENST00000554592 C2orf92A0A1B0GVN3 265 aa4.34□□□□□ -1.71
ATXN3-228ENST00000554592 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.34□□□□□ -1.71
ATXN3-228ENST00000554592 SLC22A23A1A5C7 686 aa4.34□□□□□ -1.71
ATXN3-228ENST00000554592 ANKDD1BA6NHY2 528 aa4.34□□□□□ -1.71
ATXN3-228ENST00000554592 SDR42E2A6NKP2 422 aa4.34□□□□□ -1.71
ATXN3-228ENST00000554592 OR6C76A6NM76 312 aa4.34□□□□□ -1.71
ATXN3-228ENST00000554592 KIF2AO00139 706 aaPredicted RBP4.34□□□□□ -1.71
ATXN3-228ENST00000554592 CDC7O00311 574 aa4.34□□□□□ -1.71
ATXN3-228ENST00000554592 HS3ST1O14792 307 aa4.34□□□□□ -1.71
ATXN3-228ENST00000554592 CBR3O75828 277 aa4.34□□□□□ -1.71
ATXN3-228ENST00000554592 LRATO95237 230 aa4.34□□□□□ -1.71
ATXN3-228ENST00000554592 TGM6O95932 706 aa4.34□□□□□ -1.71
ATXN3-228ENST00000554592 ZSCAN5DPP0CG00 497 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms