RNA–Protein interactions for RNA: ENST00000554574.1

PPP4R3A-204, Transcript of protein phosphatase 4 regulatory subunit 3A, human

TSL 2

Gene PPP4R3A, Length 1,944 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R3A-204	ENST00000554574	ZFP90	Q8TF47	636 aa		4.37	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	FAM162A	Q96A26	154 aa		4.37	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	RNF145	Q96MT1	663 aa		4.37	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	SEPHS2	Q99611	448 aa		4.37	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	CDX2	Q99626	313 aa	Predicted RBP	4.37	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	C9orf16	Q9BUW7	83 aa		4.37	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	CHID1	Q9BWS9	393 aa		4.37	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	OSBPL11	Q9BXB4	747 aa		4.37	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	C1QTNF5	Q9BXJ0	243 aa		4.37	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	GSDMC	Q9BYG8	508 aa		4.37	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	SRMS	Q9H3Y6	488 aa		4.37	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	PLK3	Q9H4B4	646 aa		4.37	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	MAGIX	Q9H6Y5	334 aa		4.37	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	COQ10B	Q9H8M1	238 aa		4.37	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	GIMAP4	Q9NUV9	329 aa		4.37	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	POT1	Q9NUX5	634 aa		4.37	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	C2orf42	Q9NWW7	574 aa		4.37	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	TAS2R9	Q9NYW1	312 aa		4.37	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	TAS2R7	Q9NYW3	318 aa		4.37	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	TAAR2	Q9P1P5	351 aa		4.37	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	SPAST	Q9UBP0	616 aa		4.37	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	ZNF639	Q9UID6	485 aa		4.37	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	UTS2R	Q9UKP6	389 aa		4.37	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	LSM4	Q9Y4Z0	139 aa	Known RBP	4.37	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	AP4B1	Q9Y6B7	739 aa		4.37	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	RP1	P56715	2156 aa		4.37	□□□□□ -1.71
PPP4R3A-204	ENST00000554574		A0A0A6YYD5	115 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	FAM149A	A5PLN7	773 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	GLOD5	A6NK44	160 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	RHOD	O00212	210 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	RTCA	O00442	366 aa	Known RBP	4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	BTN3A3	O00478	584 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	SOCS2	O14508	198 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	HAT1	O14929	419 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	ACOX3	O15254	700 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	CLOCK	O15516	846 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	HCRTR2	O43614	444 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	TPPP	O94811	219 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	CPSF4	O95639	269 aa	Known RBP	4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	THEGL	P0DJG4	465 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	IL9	P15248	144 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	FOSL2	P15408	326 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	CKMT2	P17540	419 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	SRD5A1	P18405	259 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	FRK	P42685	505 aa	Predicted RBP	4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	SSR2	P43308	183 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	MAGEA2	P43356	314 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	RPS15A	P62244	130 aa	Known RBP	4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	UBE2I	P63279	158 aa	Known RBP	4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	RELA	Q04206	551 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	GPR18	Q14330	331 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	FZD2	Q14332	565 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	RGN	Q15493	299 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	NRF1	Q16656	503 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	ENTPD8	Q5MY95	495 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	ZNF362	Q5T0B9	420 aa	Predicted RBP	4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	OR4C11	Q6IEV9	310 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	ENPP6	Q6UWR7	440 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	CFAP77	Q6ZQR2	320 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	IQCH	Q86VS3	1027 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	PARG	Q86W56	976 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	PAQR7	Q86WK9	346 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	PTOV1	Q86YD1	416 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	PLD3	Q8IV08	490 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	ADHFE1	Q8IWW8	467 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	CBR4	Q8N4T8	237 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	FAM86B1	Q8N7N1	296 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	MFSD9	Q8NBP5	474 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	GJC3	Q8NFK1	279 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	OR2L5	Q8NG80	312 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	IGFBPL1	Q8WX77	278 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	N4BP2L2	Q92802	583 aa	Predicted RBP	4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	NCLN	Q969V3	563 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	CIDEC	Q96AQ7	238 aa	Predicted RBP	4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	TM4SF18	Q96CE8	201 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	MS4A6E	Q96DS6	147 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	SLC47A1	Q96FL8	570 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	ZC3HAV1L	Q96H79	300 aa	Known RBP	4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	OR2A14	Q96R47	310 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	SLC29A1	Q99808	456 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	C17orf62	Q9BQA9	187 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	ZNF747	Q9BV97	191 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	SCNM1	Q9BWG6	230 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	AICDA	Q9GZX7	198 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	RAD21L1	Q9H4I0	556 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	ACSS1	Q9NUB1	689 aa	Predicted RBP	4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	C5AR2	Q9P296	337 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	ANKMY1	Q9P2S6	941 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	SAMD4A	Q9UPU9	718 aa	Known RBP	4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	LAMP3	Q9UQV4	416 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	KLK4	Q9Y5K2	254 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	RNF103-CHMP3	A0A140T963	221 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574		A0A1W2PRB8	838 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	UPK1A	O00322	258 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	DLGAP1	O14490	977 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	TXNDC9	O14530	226 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	ZW10	O43264	779 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	ERI3	O43414	337 aa	Known RBP	4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	HS6ST1	O60243	411 aa		4.36	□□□□□ -1.71
PPP4R3A-204	ENST00000554574	SLC25A12	O75746	678 aa		4.36	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms