RNA–Protein interactions for RNA: ENST00000554315.5

NUMB-209, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 1 (best)

Gene NUMB, Length 1,740 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-209ENST00000554315 FBXO27Q8NI29 283 aa12.42□□□□□ -0.42
NUMB-209ENST00000554315 ZNF563Q8TA94 476 aa12.42□□□□□ -0.42
NUMB-209ENST00000554315 BBS10Q8TAM1 723 aa12.42□□□□□ -0.42
NUMB-209ENST00000554315 SMPDL3BQ92485 455 aa12.42□□□□□ -0.42
NUMB-209ENST00000554315 TMEM19Q96HH6 336 aa12.42□□□□□ -0.42
NUMB-209ENST00000554315 ANKRD27Q96NW4 1050 aa12.42□□□□□ -0.42
NUMB-209ENST00000554315 CGREF1Q99674 301 aa12.42□□□□□ -0.42
NUMB-209ENST00000554315 ELAC2Q9BQ52 826 aaKnown RBP12.42□□□□□ -0.42
NUMB-209ENST00000554315 SPATA5L1Q9BVQ7 753 aa12.42□□□□□ -0.42
NUMB-209ENST00000554315 TMEM38AQ9H6F2 299 aa12.42□□□□□ -0.42
NUMB-209ENST00000554315 GID8Q9NWU2 228 aa12.42□□□□□ -0.42
NUMB-209ENST00000554315 ZNF175Q9Y473 711 aa12.42□□□□□ -0.42
NUMB-209ENST00000554315 TRBV5-3A0A0A0MS03 114 aa12.42□□□□□ -0.42
NUMB-209ENST00000554315 SEC14L5O43304 696 aa12.42□□□□□ -0.42
NUMB-209ENST00000554315 OIP5O43482 229 aa12.42□□□□□ -0.42
NUMB-209ENST00000554315 IL18BPO95998 194 aa12.42□□□□□ -0.42
NUMB-209ENST00000554315 CRHP06850 196 aa12.42□□□□□ -0.42
NUMB-209ENST00000554315 ETS2P15036 469 aa12.42□□□□□ -0.42
NUMB-209ENST00000554315 PRKCAP17252 672 aa12.42□□□□□ -0.42
NUMB-209ENST00000554315 PSMA4P25789 261 aaKnown RBP12.42□□□□□ -0.42
NUMB-209ENST00000554315 LSP1P33241 339 aa12.42□□□□□ -0.42
NUMB-209ENST00000554315 APOBEC1P41238 236 aaKnown RBP12.42□□□□□ -0.42
NUMB-209ENST00000554315 HTR3AP46098 478 aa12.42□□□□□ -0.42
NUMB-209ENST00000554315 RNF144AP50876 292 aaPredicted RBP12.42□□□□□ -0.42
NUMB-209ENST00000554315 CLDN15P56746 228 aa12.42□□□□□ -0.42
NUMB-209ENST00000554315 RBBP4Q09028 425 aa12.42□□□□□ -0.42
NUMB-209ENST00000554315 QPRTQ15274 297 aa12.42□□□□□ -0.42
NUMB-209ENST00000554315 GTF2IRD2BQ6EKJ0 949 aa12.42□□□□□ -0.42
NUMB-209ENST00000554315 REEP3Q6NUK4 255 aa12.42□□□□□ -0.42
NUMB-209ENST00000554315 SEM1Q6ZVN7 128 aa12.42□□□□□ -0.42
NUMB-209ENST00000554315 SPATA21Q7Z572 469 aa12.42□□□□□ -0.42
NUMB-209ENST00000554315 GTF2IRD2Q86UP8 949 aa12.42□□□□□ -0.42
NUMB-209ENST00000554315 MSRB3Q8IXL7 192 aa12.42□□□□□ -0.42
NUMB-209ENST00000554315 FAM71CQ8NEG0 241 aa12.42□□□□□ -0.42
NUMB-209ENST00000554315 TNIP2Q8NFZ5 429 aa12.42□□□□□ -0.42
NUMB-209ENST00000554315 C10orf82Q8WW14 230 aa12.42□□□□□ -0.42
NUMB-209ENST00000554315 ZNF607Q96SK3 696 aa12.42□□□□□ -0.42
NUMB-209ENST00000554315 PRRG4Q9BZD6 226 aa12.42□□□□□ -0.42
NUMB-209ENST00000554315 ACER3Q9NUN7 267 aa12.42□□□□□ -0.42
NUMB-209ENST00000554315 CAPN7Q9Y6W3 813 aa12.42□□□□□ -0.42
NUMB-209ENST00000554315 FLNBO75369 2602 aaKnown RBP12.41□□□□□ -0.42
NUMB-209ENST00000554315 LOC100653049A0A140TA62 436 aa12.41□□□□□ -0.42
NUMB-209ENST00000554315 SLC22A20A6NK97 555 aa12.41□□□□□ -0.42
NUMB-209ENST00000554315 SHISA8B8ZZ34 492 aa12.41□□□□□ -0.42
NUMB-209ENST00000554315 ETV2O00321 342 aaPredicted RBP12.41□□□□□ -0.42
NUMB-209ENST00000554315 EIF1AYO14602 144 aaKnown RBP12.41□□□□□ -0.42
NUMB-209ENST00000554315 ADAMDEC1O15204 470 aa12.41□□□□□ -0.42
NUMB-209ENST00000554315 SERPINB7O75635 380 aa12.41□□□□□ -0.42
NUMB-209ENST00000554315 KRT34O76011 436 aa12.41□□□□□ -0.42
NUMB-209ENST00000554315 PGM3O95394 542 aa12.41□□□□□ -0.42
NUMB-209ENST00000554315 RPS4Y1P22090 263 aaKnown RBP12.41□□□□□ -0.42
NUMB-209ENST00000554315 MAP2K6P52564 334 aa12.41□□□□□ -0.42
NUMB-209ENST00000554315 SUCLG1P53597 346 aaKnown RBP12.41□□□□□ -0.42
NUMB-209ENST00000554315 CLDN20P56880 219 aa12.41□□□□□ -0.42
NUMB-209ENST00000554315 CARD18P57730 90 aa12.41□□□□□ -0.42
NUMB-209ENST00000554315 SESN3P58005 492 aa12.41□□□□□ -0.42
NUMB-209ENST00000554315 CDK6Q00534 326 aa12.41□□□□□ -0.42
NUMB-209ENST00000554315 NDUFAF6Q330K2 333 aa12.41□□□□□ -0.42
NUMB-209ENST00000554315 ZNF550Q7Z398 422 aa12.41□□□□□ -0.42
NUMB-209ENST00000554315 SLC30A8Q8IWU4 369 aa12.41□□□□□ -0.42
NUMB-209ENST00000554315 BHLHE22Q8NFJ8 381 aaPredicted RBP12.41□□□□□ -0.42
NUMB-209ENST00000554315 RP9Q8TA86 221 aaKnown RBP12.41□□□□□ -0.42
NUMB-209ENST00000554315 POC1BQ8TC44 478 aa12.41□□□□□ -0.42
NUMB-209ENST00000554315 QRSL1Q9H0R6 528 aaKnown RBP12.41□□□□□ -0.42
NUMB-209ENST00000554315 SLC24A3Q9HC58 644 aa12.41□□□□□ -0.42
NUMB-209ENST00000554315 SPIN1Q9Y657 262 aaPredicted RBP12.41□□□□□ -0.42
NUMB-209ENST00000554315 SPTBN1Q01082 2364 aaKnown RBP12.41□□□□□ -0.42
NUMB-209ENST00000554315 PCNX1Q96RV3 2341 aa12.41□□□□□ -0.42
NUMB-209ENST00000554315 DSPPQ9NZW4 1301 aa12.4□□□□□ -0.42
NUMB-209ENST00000554315 CENPVL1A0A0U1RR11 272 aa12.4□□□□□ -0.42
NUMB-209ENST00000554315 CFAP73A6NFT4 308 aa12.4□□□□□ -0.42
NUMB-209ENST00000554315 TOXO94900 526 aa12.4□□□□□ -0.42
NUMB-209ENST00000554315 SYNGR4O95473 234 aa12.4□□□□□ -0.42
NUMB-209ENST00000554315 PABPC4LP0CB38 370 aaKnown RBP12.4□□□□□ -0.42
NUMB-209ENST00000554315 TMIGD3P0DMS9 266 aaPredicted RBP12.4□□□□□ -0.42
NUMB-209ENST00000554315 ARAFP10398 606 aa12.4□□□□□ -0.42
NUMB-209ENST00000554315 FCGR2AP12318 317 aa12.4□□□□□ -0.42
NUMB-209ENST00000554315 RYKP34925 604 aa12.4□□□□□ -0.42
NUMB-209ENST00000554315 EIF1AXP47813 144 aaKnown RBP12.4□□□□□ -0.42
NUMB-209ENST00000554315 SEC24CP53992 1094 aa12.4□□□□□ -0.42
NUMB-209ENST00000554315 MAPK11Q15759 364 aa12.4□□□□□ -0.42
NUMB-209ENST00000554315 TOMM34Q15785 309 aaPredicted RBP12.4□□□□□ -0.42
NUMB-209ENST00000554315 TRMT5Q32P41 509 aaKnown RBP12.4□□□□□ -0.42
NUMB-209ENST00000554315 ZNF311Q5JNZ3 666 aa12.4□□□□□ -0.42
NUMB-209ENST00000554315 RETREG3Q86VR2 466 aa12.4□□□□□ -0.42
NUMB-209ENST00000554315 C11orf65Q8NCR3 313 aa12.4□□□□□ -0.42
NUMB-209ENST00000554315 OR2V1Q8NHB1 315 aa12.4□□□□□ -0.42
NUMB-209ENST00000554315 CNOT9Q92600 299 aaKnown RBP12.4□□□□□ -0.42
NUMB-209ENST00000554315 OSTF1Q92882 214 aa12.4□□□□□ -0.42
NUMB-209ENST00000554315 REXO5Q96IC2 774 aaKnown RBP12.4□□□□□ -0.42
NUMB-209ENST00000554315 KLHL15Q96M94 604 aa12.4□□□□□ -0.42
NUMB-209ENST00000554315 SPATA9Q9BWV2 254 aa12.4□□□□□ -0.42
NUMB-209ENST00000554315 PINK1Q9BXM7 581 aa12.4□□□□□ -0.42
NUMB-209ENST00000554315 CLCF1Q9UBD9 225 aa12.4□□□□□ -0.42
NUMB-209ENST00000554315 MCTS1Q9ULC4 181 aaKnown RBP12.4□□□□□ -0.42
NUMB-209ENST00000554315 ICE1Q9Y2F5 2266 aa12.4□□□□□ -0.42
NUMB-209ENST00000554315 PHF3Q92576 2039 aaKnown RBP12.4□□□□□ -0.42
NUMB-209ENST00000554315 CDHR4A6H8M9 788 aa12.4□□□□□ -0.43
NUMB-209ENST00000554315 PRORSD1PA6NEY8 169 aa12.4□□□□□ -0.43
NUMB-209ENST00000554315 FAAHO00519 579 aa12.4□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms