RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 CLDN8P56748 225 aa16.7■□□□□ 0.26
CPSF2-203ENST00000554290 RAC3P60763 192 aa16.7■□□□□ 0.26
CPSF2-203ENST00000554290 EMX2Q04743 252 aa16.7■□□□□ 0.26
CPSF2-203ENST00000554290 CBFBQ13951 182 aa16.7■□□□□ 0.26
CPSF2-203ENST00000554290 P2RY6Q15077 328 aa16.7■□□□□ 0.26
CPSF2-203ENST00000554290 SMU1Q2TAY7 513 aa16.7■□□□□ 0.26
CPSF2-203ENST00000554290 NDUFAF6Q330K2 333 aa16.7■□□□□ 0.26
CPSF2-203ENST00000554290 SLC25A53Q5H9E4 307 aa16.7■□□□□ 0.26
CPSF2-203ENST00000554290 SFRP5Q5T4F7 317 aa16.7■□□□□ 0.26
CPSF2-203ENST00000554290 NUFIP2Q7Z417 695 aaKnown RBP16.7■□□□□ 0.26
CPSF2-203ENST00000554290 NUDCD3Q8IVD9 361 aa16.7■□□□□ 0.26
CPSF2-203ENST00000554290 GABRG1Q8N1C3 465 aa16.7■□□□□ 0.26
CPSF2-203ENST00000554290 OR5D16Q8NGK9 328 aa16.7■□□□□ 0.26
CPSF2-203ENST00000554290 IGFBPL1Q8WX77 278 aa16.7■□□□□ 0.26
CPSF2-203ENST00000554290 ZIM3Q96PE6 472 aa16.7■□□□□ 0.26
CPSF2-203ENST00000554290 NMUR2Q9GZQ4 415 aa16.7■□□□□ 0.26
CPSF2-203ENST00000554290 ASIC5Q9NY37 505 aa16.7■□□□□ 0.26
CPSF2-203ENST00000554290 KLHL9Q9P2J3 617 aa16.7■□□□□ 0.26
CPSF2-203ENST00000554290 PCDHGB4Q9UN71 923 aa16.7■□□□□ 0.26
CPSF2-203ENST00000554290 TRIM64A6NGJ6 449 aa16.69■□□□□ 0.26
CPSF2-203ENST00000554290 SERINC4A6NH21 518 aa16.69■□□□□ 0.26
CPSF2-203ENST00000554290 TRIM64BA6NI03 449 aa16.69■□□□□ 0.26
CPSF2-203ENST00000554290 STX11O75558 287 aa16.69■□□□□ 0.26
CPSF2-203ENST00000554290 GCM2O75603 506 aaPredicted RBP16.69■□□□□ 0.26
CPSF2-203ENST00000554290 CNOT4O95628 575 aaKnown RBP16.69■□□□□ 0.26
CPSF2-203ENST00000554290 MATN1P21941 496 aa16.69■□□□□ 0.26
CPSF2-203ENST00000554290 VSNL1P62760 191 aa16.69■□□□□ 0.26
CPSF2-203ENST00000554290 QPRTQ15274 297 aa16.69■□□□□ 0.26
CPSF2-203ENST00000554290 PDZK1Q5T2W1 519 aa16.69■□□□□ 0.26
CPSF2-203ENST00000554290 C6orf120Q7Z4R8 191 aa16.69■□□□□ 0.26
CPSF2-203ENST00000554290 HSD17B8Q92506 261 aa16.69■□□□□ 0.26
CPSF2-203ENST00000554290 ESRP2Q9H6T0 727 aaKnown RBP16.69■□□□□ 0.26
CPSF2-203ENST00000554290 COQ10BQ9H8M1 238 aa16.69■□□□□ 0.26
CPSF2-203ENST00000554290 SERINC1Q9NRX5 453 aa16.69■□□□□ 0.26
CPSF2-203ENST00000554290 ZNF701Q9NV72 531 aaPredicted RBP16.69■□□□□ 0.26
CPSF2-203ENST00000554290 EXD2Q9NVH0 621 aa16.69■□□□□ 0.26
CPSF2-203ENST00000554290 TYROBPO43914 113 aa16.68■□□□□ 0.26
CPSF2-203ENST00000554290 CYP7B1O75881 506 aa16.68■□□□□ 0.26
CPSF2-203ENST00000554290 CREB1P16220 341 aa16.68■□□□□ 0.26
CPSF2-203ENST00000554290 ENPP1P22413 925 aa16.68■□□□□ 0.26
CPSF2-203ENST00000554290 RPS26P62854 115 aaKnown RBP16.68■□□□□ 0.26
CPSF2-203ENST00000554290 ZNF844Q08AG5 666 aa16.68■□□□□ 0.26
CPSF2-203ENST00000554290 GPR68Q15743 365 aa16.68■□□□□ 0.26
CPSF2-203ENST00000554290 ZNF141Q15928 474 aa16.68■□□□□ 0.26
CPSF2-203ENST00000554290 ADAM5Q6NVV9 412 aa16.68■□□□□ 0.26
CPSF2-203ENST00000554290 C3orf33Q6P1S2 294 aa16.68■□□□□ 0.26
CPSF2-203ENST00000554290 EMBQ6PCB8 327 aa16.68■□□□□ 0.26
CPSF2-203ENST00000554290 C16orf62Q7Z3J2 963 aa16.68■□□□□ 0.26
CPSF2-203ENST00000554290 AKAP1Q92667 903 aaKnown RBP eCLIP16.68■□□□□ 0.26
CPSF2-203ENST00000554290 KISS1RQ969F8 398 aaPredicted RBP16.68■□□□□ 0.26
CPSF2-203ENST00000554290 LAT2Q9GZY6 243 aa16.68■□□□□ 0.26
CPSF2-203ENST00000554290 RNF115Q9Y4L5 304 aa16.68■□□□□ 0.26
CPSF2-203ENST00000554290 ABCA2Q9BZC7 2435 aa16.68■□□□□ 0.26
CPSF2-203ENST00000554290 ARID1AO14497 2285 aa16.67■□□□□ 0.26
CPSF2-203ENST00000554290 DSCAMO60469 2012 aa16.67■□□□□ 0.26
CPSF2-203ENST00000554290 RNF103-CHMP3A0A140T963 221 aa16.67■□□□□ 0.26
CPSF2-203ENST00000554290 ETV2O00321 342 aaPredicted RBP16.67■□□□□ 0.26
CPSF2-203ENST00000554290 RNASET2O00584 256 aaKnown RBP16.67■□□□□ 0.26
CPSF2-203ENST00000554290 AGR2O95994 175 aa16.67■□□□□ 0.26
CPSF2-203ENST00000554290 ADAP00813 363 aa16.67■□□□□ 0.26
CPSF2-203ENST00000554290 CSTAP01040 98 aa16.67■□□□□ 0.26
CPSF2-203ENST00000554290 ETV4P43268 484 aa16.67■□□□□ 0.26
CPSF2-203ENST00000554290 ATP5J2P56134 94 aa16.67■□□□□ 0.26
CPSF2-203ENST00000554290 RPS4XP62701 263 aaKnown RBP16.67■□□□□ 0.26
CPSF2-203ENST00000554290 ITGADQ13349 1161 aa16.67■□□□□ 0.26
CPSF2-203ENST00000554290 CAPRIN1Q14444 709 aaKnown RBP16.67■□□□□ 0.26
CPSF2-203ENST00000554290 TSC22D1Q15714 1073 aa16.67■□□□□ 0.26
CPSF2-203ENST00000554290 ARHGAP11BQ3KRB8 267 aa16.67■□□□□ 0.26
CPSF2-203ENST00000554290 TIGD2Q4W5G0 525 aa16.67■□□□□ 0.26
CPSF2-203ENST00000554290 OR4F3Q6IEY1 312 aa16.67■□□□□ 0.26
CPSF2-203ENST00000554290 CLECL1Q8IZS7 167 aa16.67■□□□□ 0.26
CPSF2-203ENST00000554290 VPS37AQ8NEZ2 397 aa16.67■□□□□ 0.26
CPSF2-203ENST00000554290 TMEM234Q8WY98 164 aa16.67■□□□□ 0.26
CPSF2-203ENST00000554290 ST8SIA1Q92185 356 aa16.67■□□□□ 0.26
CPSF2-203ENST00000554290 SLC35G5Q96KT7 338 aa16.67■□□□□ 0.26
CPSF2-203ENST00000554290 OR5B2Q96R09 309 aa16.67■□□□□ 0.26
CPSF2-203ENST00000554290 THUMPD3Q9BV44 507 aaKnown RBP16.67■□□□□ 0.26
CPSF2-203ENST00000554290 BCO1Q9HAY6 547 aa16.67■□□□□ 0.26
CPSF2-203ENST00000554290 MKLN1Q9UL63 735 aa16.67■□□□□ 0.26
CPSF2-203ENST00000554290 LAMP3Q9UQV4 416 aa16.67■□□□□ 0.26
CPSF2-203ENST00000554290 RAI1Q7Z5J4 1906 aaPredicted RBP16.66■□□□□ 0.26
CPSF2-203ENST00000554290 IGHV3-15A0A0B4J1V0 119 aa16.66■□□□□ 0.26
CPSF2-203ENST00000554290 A0A1W2PNR3 127 aa16.66■□□□□ 0.26
CPSF2-203ENST00000554290 ESPNB1AK53 854 aa16.66■□□□□ 0.26
CPSF2-203ENST00000554290 CLOCKO15516 846 aa16.66■□□□□ 0.26
CPSF2-203ENST00000554290 FCMRO60667 390 aa16.66■□□□□ 0.26
CPSF2-203ENST00000554290 CD3EP07766 207 aa16.66■□□□□ 0.26
CPSF2-203ENST00000554290 MYZAPP0CAP1 466 aa16.66■□□□□ 0.26
CPSF2-203ENST00000554290 PGCP20142 388 aa16.66■□□□□ 0.26
CPSF2-203ENST00000554290 RASGEF1BQ0VAM2 473 aa16.66■□□□□ 0.26
CPSF2-203ENST00000554290 SKP2Q13309 424 aa16.66■□□□□ 0.26
CPSF2-203ENST00000554290 TAB1Q15750 504 aa16.66■□□□□ 0.26
CPSF2-203ENST00000554290 PDCD2Q16342 344 aaPredicted RBP16.66■□□□□ 0.26
CPSF2-203ENST00000554290 NCMAPQ5T1S8 102 aa16.66■□□□□ 0.26
CPSF2-203ENST00000554290 ATAD3BQ5T9A4 648 aa16.66■□□□□ 0.26
CPSF2-203ENST00000554290 Q6ZT83 130 aa16.66■□□□□ 0.26
CPSF2-203ENST00000554290 EIF3MQ7L2H7 374 aaKnown RBP16.66■□□□□ 0.26
CPSF2-203ENST00000554290 OR8J2Q8NGG1 315 aa16.66■□□□□ 0.26
CPSF2-203ENST00000554290 OR4A15Q8NGL6 344 aa16.66■□□□□ 0.26
CPSF2-203ENST00000554290 RAB3IL1Q8TBN0 382 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms