RNA–Protein interactions for RNA: ENST00000553917.5

RALGAPA1-205, Transcript of Ral GTPase activating protein catalytic alpha subunit 1, human

TSL 3

Gene RALGAPA1, Length 723 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RALGAPA1-205	ENST00000553917	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	COPS3	Q9UNS2	423 aa		2.58	□□□□□ -2
RALGAPA1-205	ENST00000553917	IGLV7-46	A0A075B6I9	117 aa		2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	IGLV4-3	A0A075B6K6	122 aa		2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	IGHV2-70D	A0A0C4DH43	119 aa		2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	TEX48	A0A1B0GUV7	120 aa		2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	FRG2C	A6NGY1	282 aa		2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917		H3BMQ9	156 aa		2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	RS1	O15537	224 aa		2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	SNAP91	O60641	907 aa		2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	RAMP3	O60896	148 aa		2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	CTAG2	O75638	210 aa		2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	ZNF432	O94892	652 aa		2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	IGHV3-9	P01782	118 aa		2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	CD55	P08174	381 aa		2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	ATP1B2	P14415	290 aa	Predicted RBP	2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	ETS2	P15036	469 aa		2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	SERPINA2	P20848	420 aa		2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	ZNF10	P21506	573 aa	Predicted RBP	2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	HMGB2	P26583	209 aa	Known RBP	2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	GCA	P28676	217 aa		2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	GNA11	P29992	359 aa		2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	CD80	P33681	288 aa		2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	ACVR1B	P36896	505 aa		2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	MAP3K8	P41279	467 aa		2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	CRYBB1	P53674	252 aa	Predicted RBP	2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	NDUFV3	P56181	108 aa	Known RBP	2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	RPS15	P62841	145 aa	Known RBP	2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	PUDP	Q08623	228 aa		2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	KLRB1	Q12918	225 aa		2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	CALCOCO2	Q13137	446 aa		2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	IL18R1	Q13478	541 aa		2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	HADH	Q16836	314 aa	Known RBP	2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	FAM182A	Q5T1J6	154 aa		2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	LIPN	Q5VXI9	398 aa		2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	PAQR6	Q6TCH4	344 aa		2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	TMUB2	Q71RG4	321 aa		2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	EIF3M	Q7L2H7	374 aa	Known RBP	2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	TMCO2	Q7Z6W1	182 aa	Predicted RBP	2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	DHDDS	Q86SQ9	333 aa		2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	LUZP2	Q86TE4	346 aa		2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	LRRTM1	Q86UE6	522 aa		2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	LRRC49	Q8IUZ0	686 aa		2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	LINC01561	Q8N1V8	128 aa		2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	ZNF614	Q8N883	585 aa		2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	ZNF491	Q8N8L2	437 aa		2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	C17orf47	Q8NEP4	570 aa		2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	OR4D9	Q8NGE8	314 aa		2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	HCAR2	Q8TDS4	363 aa		2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	NPRL2	Q8WTW4	380 aa		2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	DNAJA4	Q8WW22	397 aa	Predicted RBP	2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	TRUB1	Q8WWH5	349 aa	Known RBP	2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	SLC38A4	Q969I6	547 aa		2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	NUS1	Q96E22	293 aa		2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	TIMD4	Q96H15	378 aa		2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	SERAC1	Q96JX3	654 aa		2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	PKNOX2	Q96KN3	472 aa		2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	CENPK	Q9BS16	269 aa		2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	TRIM62	Q9BVG3	475 aa		2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	PPDPF	Q9H3Y8	114 aa		2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	ZNF385D	Q9H6B1	395 aa		2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	SMYD3	Q9H7B4	428 aa		2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	AUNIP	Q9H7T9	357 aa		2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	ZNF160	Q9HCG1	818 aa		2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	SIGLEC8	Q9NYZ4	499 aa		2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	PISD	Q9UG56	409 aa		2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	PRPF19	Q9UMS4	504 aa	Known RBP	2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	SCML2	Q9UQR0	700 aa		2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	MRPL11	Q9Y3B7	192 aa	Known RBP	2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917	PEX16	Q9Y5Y5	336 aa		2.57	□□□□□ -2
RALGAPA1-205	ENST00000553917		A0A1W2PPE3	182 aa		2.56	□□□□□ -2
RALGAPA1-205	ENST00000553917	ZNF840P	A6NDX5	716 aa		2.56	□□□□□ -2
RALGAPA1-205	ENST00000553917	SAGE2P	A6NJ88	616 aa		2.56	□□□□□ -2
RALGAPA1-205	ENST00000553917	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	2.56	□□□□□ -2
RALGAPA1-205	ENST00000553917		B4DXG7	233 aa		2.56	□□□□□ -2
RALGAPA1-205	ENST00000553917		E7ESA3	106 aa		2.56	□□□□□ -2
RALGAPA1-205	ENST00000553917	SPECC1L-ADORA2A	F8WAN1	911 aa		2.56	□□□□□ -2
RALGAPA1-205	ENST00000553917	ABCD4	O14678	606 aa		2.56	□□□□□ -2
RALGAPA1-205	ENST00000553917	DNAJB6	O75190	326 aa		2.56	□□□□□ -2
RALGAPA1-205	ENST00000553917	ATP5L	O75964	103 aa		2.56	□□□□□ -2
RALGAPA1-205	ENST00000553917	HP	P00738	406 aa		2.56	□□□□□ -2
RALGAPA1-205	ENST00000553917	IGHG4	P01861	327 aa		2.56	□□□□□ -2
RALGAPA1-205	ENST00000553917	FTH1	P02794	183 aa		2.56	□□□□□ -2
RALGAPA1-205	ENST00000553917	SERPINB2	P05120	415 aa		2.56	□□□□□ -2
RALGAPA1-205	ENST00000553917	HCK	P08631	526 aa		2.56	□□□□□ -2
RALGAPA1-205	ENST00000553917	BCL3	P20749	454 aa		2.56	□□□□□ -2
RALGAPA1-205	ENST00000553917	UGT1A4	P22310	534 aa		2.56	□□□□□ -2
RALGAPA1-205	ENST00000553917	LMO2	P25791	158 aa		2.56	□□□□□ -2
RALGAPA1-205	ENST00000553917	CHML	P26374	656 aa		2.56	□□□□□ -2
RALGAPA1-205	ENST00000553917	CD1C	P29017	333 aa		2.56	□□□□□ -2
RALGAPA1-205	ENST00000553917	OXTR	P30559	389 aa		2.56	□□□□□ -2
RALGAPA1-205	ENST00000553917	FGF9	P31371	208 aa	Predicted RBP	2.56	□□□□□ -2
RALGAPA1-205	ENST00000553917	CASQ1	P31415	396 aa		2.56	□□□□□ -2
RALGAPA1-205	ENST00000553917	OTX1	P32242	354 aa	Predicted RBP	2.56	□□□□□ -2
RALGAPA1-205	ENST00000553917	CDH5	P33151	784 aa	Predicted RBP	2.56	□□□□□ -2
RALGAPA1-205	ENST00000553917	RDX	P35241	583 aa	Known RBP	2.56	□□□□□ -2
RALGAPA1-205	ENST00000553917	ETV5	P41161	510 aa		2.56	□□□□□ -2
RALGAPA1-205	ENST00000553917	ELK3	P41970	407 aa		2.56	□□□□□ -2
RALGAPA1-205	ENST00000553917	TAF6	P49848	677 aa		2.56	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms