RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 UBQLN3Q9H347 655 aa11.48□□□□□ -0.57
HDAC7-230ENST00000552960 CAPN10Q9HC96 672 aa11.48□□□□□ -0.57
HDAC7-230ENST00000552960 CD93Q9NPY3 652 aa11.48□□□□□ -0.57
HDAC7-230ENST00000552960 AK6Q9Y3D8 172 aaKnown RBP11.48□□□□□ -0.57
HDAC7-230ENST00000552960 A0A1W2PPL8 197 aa11.48□□□□□ -0.57
HDAC7-230ENST00000552960 MID1O15344 667 aa11.48□□□□□ -0.57
HDAC7-230ENST00000552960 GKN3PP0CG01 181 aa11.48□□□□□ -0.57
HDAC7-230ENST00000552960 HOXB3P14651 431 aaPredicted RBP11.48□□□□□ -0.57
HDAC7-230ENST00000552960 BMP7P18075 431 aa11.48□□□□□ -0.57
HDAC7-230ENST00000552960 BLVRAP53004 296 aa11.48□□□□□ -0.57
HDAC7-230ENST00000552960 PUDPQ08623 228 aa11.48□□□□□ -0.57
HDAC7-230ENST00000552960 SLC36A2Q495M3 483 aa11.48□□□□□ -0.57
HDAC7-230ENST00000552960 ACSM3Q53FZ2 586 aa11.48□□□□□ -0.57
HDAC7-230ENST00000552960 CD276Q5ZPR3 534 aa11.48□□□□□ -0.57
HDAC7-230ENST00000552960 GPR139Q6DWJ6 353 aa11.48□□□□□ -0.57
HDAC7-230ENST00000552960 SRFBP1Q8NEF9 429 aaKnown RBP11.48□□□□□ -0.57
HDAC7-230ENST00000552960 OR9A2Q8NGT5 310 aa11.48□□□□□ -0.57
HDAC7-230ENST00000552960 NUS1Q96E22 293 aa11.48□□□□□ -0.57
HDAC7-230ENST00000552960 CAMK1GQ96NX5 476 aa11.48□□□□□ -0.57
HDAC7-230ENST00000552960 OR2M2Q96R28 347 aa11.48□□□□□ -0.57
HDAC7-230ENST00000552960 OR7D2Q96RA2 312 aa11.48□□□□□ -0.57
HDAC7-230ENST00000552960 AIFM2Q9BRQ8 373 aa11.48□□□□□ -0.57
HDAC7-230ENST00000552960 NDC1Q9BTX1 674 aa11.48□□□□□ -0.57
HDAC7-230ENST00000552960 LGR4Q9BXB1 951 aa11.48□□□□□ -0.57
HDAC7-230ENST00000552960 PINK1Q9BXM7 581 aa11.48□□□□□ -0.57
HDAC7-230ENST00000552960 C12orf10Q9HB07 376 aa11.48□□□□□ -0.57
HDAC7-230ENST00000552960 DLL4Q9NR61 685 aa11.48□□□□□ -0.57
HDAC7-230ENST00000552960 SLC23A2Q9UGH3 650 aa11.48□□□□□ -0.57
HDAC7-230ENST00000552960 FBXL4Q9UKA2 621 aa11.48□□□□□ -0.57
HDAC7-230ENST00000552960 TSPAN11A1L157 253 aa11.48□□□□□ -0.57
HDAC7-230ENST00000552960 OR5F1O95221 314 aa11.48□□□□□ -0.57
HDAC7-230ENST00000552960 WNT1P04628 370 aa11.48□□□□□ -0.57
HDAC7-230ENST00000552960 SAGP10523 405 aaPredicted RBP11.48□□□□□ -0.57
HDAC7-230ENST00000552960 CTRB1P17538 263 aa11.48□□□□□ -0.57
HDAC7-230ENST00000552960 NPR2P20594 1047 aa11.48□□□□□ -0.57
HDAC7-230ENST00000552960 F8A1P23610 371 aa11.48□□□□□ -0.57
HDAC7-230ENST00000552960 NOS3P29474 1203 aa11.48□□□□□ -0.57
HDAC7-230ENST00000552960 MAP2K6P52564 334 aa11.48□□□□□ -0.57
HDAC7-230ENST00000552960 RIN1Q13671 783 aa11.48□□□□□ -0.57
HDAC7-230ENST00000552960 AGERQ15109 404 aa11.48□□□□□ -0.57
HDAC7-230ENST00000552960 LTB4RQ15722 352 aa11.48□□□□□ -0.57
HDAC7-230ENST00000552960 TMEM31Q5JXX7 168 aa11.48□□□□□ -0.57
HDAC7-230ENST00000552960 CTRB2Q6GPI1 263 aa11.48□□□□□ -0.57
HDAC7-230ENST00000552960 SLC25A25Q6KCM7 469 aa11.48□□□□□ -0.57
HDAC7-230ENST00000552960 FAM122CQ6P4D5 195 aa11.48□□□□□ -0.57
HDAC7-230ENST00000552960 ZNF793Q6ZN11 406 aa11.48□□□□□ -0.57
HDAC7-230ENST00000552960 RD3Q7Z3Z2 195 aa11.48□□□□□ -0.57
HDAC7-230ENST00000552960 KLHDC8AQ8IYD2 350 aa11.48□□□□□ -0.57
HDAC7-230ENST00000552960 OR51A7Q8NH64 312 aa11.48□□□□□ -0.57
HDAC7-230ENST00000552960 ABHD4Q8TB40 342 aa11.48□□□□□ -0.57
HDAC7-230ENST00000552960 SLC41A3Q96GZ6 507 aa11.48□□□□□ -0.57
HDAC7-230ENST00000552960 TRAF4Q9BUZ4 470 aaPredicted RBP11.48□□□□□ -0.57
HDAC7-230ENST00000552960 IFT27Q9BW83 186 aa11.48□□□□□ -0.57
HDAC7-230ENST00000552960 ATG4BQ9Y4P1 393 aa11.48□□□□□ -0.57
HDAC7-230ENST00000552960 NUP210Q8TEM1 1887 aaPredicted RBP11.48□□□□□ -0.57
HDAC7-230ENST00000552960 LRRK1Q38SD2 2015 aa11.48□□□□□ -0.57
HDAC7-230ENST00000552960 C7orf66A4D0T2 115 aa11.47□□□□□ -0.57
HDAC7-230ENST00000552960 RAB3BP20337 219 aa11.47□□□□□ -0.57
HDAC7-230ENST00000552960 LTBRP36941 435 aa11.47□□□□□ -0.57
HDAC7-230ENST00000552960 CLCNKAP51800 687 aa11.47□□□□□ -0.57
HDAC7-230ENST00000552960 ELAVL3Q14576 367 aaKnown RBP11.47□□□□□ -0.57
HDAC7-230ENST00000552960 SLC9A5Q14940 896 aa11.47□□□□□ -0.57
HDAC7-230ENST00000552960 MFSD13AQ14CX5 517 aa11.47□□□□□ -0.57
HDAC7-230ENST00000552960 GPR68Q15743 365 aa11.47□□□□□ -0.57
HDAC7-230ENST00000552960 GSG1Q2KHT4 349 aa11.47□□□□□ -0.57
HDAC7-230ENST00000552960 CCNJQ5T5M9 372 aa11.47□□□□□ -0.57
HDAC7-230ENST00000552960 FAAP20Q6NZ36 180 aa11.47□□□□□ -0.57
HDAC7-230ENST00000552960 LCTLQ6UWM7 567 aa11.47□□□□□ -0.57
HDAC7-230ENST00000552960 ZNF620Q6ZNG0 422 aa11.47□□□□□ -0.57
HDAC7-230ENST00000552960 GDF7Q7Z4P5 450 aa11.47□□□□□ -0.57
HDAC7-230ENST00000552960 UBE3DQ7Z6J8 389 aa11.47□□□□□ -0.57
HDAC7-230ENST00000552960 AMZ2Q86W34 360 aa11.47□□□□□ -0.57
HDAC7-230ENST00000552960 YAF2Q8IY57 180 aa11.47□□□□□ -0.57
HDAC7-230ENST00000552960 ZNF433Q8N7K0 673 aaPredicted RBP11.47□□□□□ -0.57
HDAC7-230ENST00000552960 NUP43Q8NFH3 380 aa11.47□□□□□ -0.57
HDAC7-230ENST00000552960 OR52L1Q8NGH7 329 aa11.47□□□□□ -0.57
HDAC7-230ENST00000552960 COQ8AQ8NI60 647 aa11.47□□□□□ -0.57
HDAC7-230ENST00000552960 ACOT11Q8WXI4 607 aaPredicted RBP11.47□□□□□ -0.57
HDAC7-230ENST00000552960 OR8D1Q8WZ84 308 aa11.47□□□□□ -0.57
HDAC7-230ENST00000552960 ST8SIA2Q92186 375 aa11.47□□□□□ -0.57
HDAC7-230ENST00000552960 SUSD6Q92537 303 aa11.47□□□□□ -0.57
HDAC7-230ENST00000552960 YIPF5Q969M3 257 aa11.47□□□□□ -0.57
HDAC7-230ENST00000552960 CNRIP1Q96F85 164 aaPredicted RBP11.47□□□□□ -0.57
HDAC7-230ENST00000552960 DTD2Q96FN9 168 aa11.47□□□□□ -0.57
HDAC7-230ENST00000552960 ERMAPQ96PL5 475 aaPredicted RBP11.47□□□□□ -0.57
HDAC7-230ENST00000552960 ZNF649Q9BS31 505 aa11.47□□□□□ -0.57
HDAC7-230ENST00000552960 FAIM2Q9BWQ8 316 aa11.47□□□□□ -0.57
HDAC7-230ENST00000552960 S1PR5Q9H228 398 aa11.47□□□□□ -0.57
HDAC7-230ENST00000552960 OR52D1Q9H346 318 aa11.47□□□□□ -0.57
HDAC7-230ENST00000552960 TRBV23OR9-2A0A075B6M9 112 aa11.47□□□□□ -0.57
HDAC7-230ENST00000552960 A0A0G2JPF8 293 aa11.47□□□□□ -0.57
HDAC7-230ENST00000552960 TRABD2BA6NFA1 517 aa11.47□□□□□ -0.57
HDAC7-230ENST00000552960 CHURC1-FNTBB4DL54 471 aa11.47□□□□□ -0.57
HDAC7-230ENST00000552960 HNRNPCL3B7ZW38 293 aa11.47□□□□□ -0.57
HDAC7-230ENST00000552960 ZNF593O00488 134 aaPredicted RBP11.47□□□□□ -0.57
HDAC7-230ENST00000552960 HMGN1P05114 100 aa11.47□□□□□ -0.57
HDAC7-230ENST00000552960 HNRNPCL4P0DMR1 293 aa11.47□□□□□ -0.57
HDAC7-230ENST00000552960 DRD3P35462 400 aa11.47□□□□□ -0.57
HDAC7-230ENST00000552960 VEGFCP49767 419 aa11.47□□□□□ -0.57
HDAC7-230ENST00000552960 ANXA11P50995 505 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms