RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 VPS26BQ4G0F5 336 aa10.59□□□□□ -0.71
CKAP4-202ENST00000552828 SPANXN4Q5MJ08 99 aa10.59□□□□□ -0.71
CKAP4-202ENST00000552828 ADAM5Q6NVV9 412 aa10.59□□□□□ -0.71
CKAP4-202ENST00000552828 ZCCHC12Q6PEW1 402 aa10.59□□□□□ -0.71
CKAP4-202ENST00000552828 BHLHB9Q6PI77 547 aa10.59□□□□□ -0.71
CKAP4-202ENST00000552828 MIER2Q8N344 545 aa10.59□□□□□ -0.71
CKAP4-202ENST00000552828 GTPBP8Q8N3Z3 284 aaPredicted RBP10.59□□□□□ -0.71
CKAP4-202ENST00000552828 CDRT4Q8N9R6 151 aa10.59□□□□□ -0.71
CKAP4-202ENST00000552828 OR56A1Q8NGH5 318 aa10.59□□□□□ -0.71
CKAP4-202ENST00000552828 MOAP1Q96BY2 351 aa10.59□□□□□ -0.71
CKAP4-202ENST00000552828 FAM120BQ96EK7 910 aaKnown RBP10.59□□□□□ -0.71
CKAP4-202ENST00000552828 TEX37Q96LM6 180 aa10.59□□□□□ -0.71
CKAP4-202ENST00000552828 EBF4Q9BQW3 602 aa10.59□□□□□ -0.71
CKAP4-202ENST00000552828 TBL1XR1Q9BZK7 514 aa10.59□□□□□ -0.71
CKAP4-202ENST00000552828 FANCFQ9NPI8 374 aa10.59□□□□□ -0.71
CKAP4-202ENST00000552828 EQTNQ9NQ60 294 aa10.59□□□□□ -0.71
CKAP4-202ENST00000552828 SDR39U1Q9NRG7 319 aaPredicted RBP10.59□□□□□ -0.71
CKAP4-202ENST00000552828 SIRT3Q9NTG7 399 aaPredicted RBP10.59□□□□□ -0.71
CKAP4-202ENST00000552828 ZCCHC3Q9NUD5 404 aaKnown RBP10.59□□□□□ -0.71
CKAP4-202ENST00000552828 ZIM2Q9NZV7 527 aa10.59□□□□□ -0.71
CKAP4-202ENST00000552828 DCTN4Q9UJW0 460 aa10.59□□□□□ -0.71
CKAP4-202ENST00000552828 GPR52Q9Y2T5 361 aa10.59□□□□□ -0.71
CKAP4-202ENST00000552828 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.58□□□□□ -0.72
CKAP4-202ENST00000552828 SHISA8B8ZZ34 492 aa10.58□□□□□ -0.72
CKAP4-202ENST00000552828 ALG1L2C9J202 215 aa10.58□□□□□ -0.72
CKAP4-202ENST00000552828 EIF1AYO14602 144 aaKnown RBP10.58□□□□□ -0.72
CKAP4-202ENST00000552828 SCN2BO60939 215 aa10.58□□□□□ -0.72
CKAP4-202ENST00000552828 CRLF1O75462 422 aa10.58□□□□□ -0.72
CKAP4-202ENST00000552828 CPSF4O95639 269 aaKnown RBP10.58□□□□□ -0.72
CKAP4-202ENST00000552828 PLAUP00749 431 aa10.58□□□□□ -0.72
CKAP4-202ENST00000552828 IGKV1D-16P01601 117 aa10.58□□□□□ -0.72
CKAP4-202ENST00000552828 IL6P05231 212 aa10.58□□□□□ -0.72
CKAP4-202ENST00000552828 PGRP06401 933 aa10.58□□□□□ -0.72
CKAP4-202ENST00000552828 VIMP08670 466 aaKnown RBP10.58□□□□□ -0.72
CKAP4-202ENST00000552828 PSMB1P20618 241 aaKnown RBP10.58□□□□□ -0.72
CKAP4-202ENST00000552828 GABRA3P34903 492 aa10.58□□□□□ -0.72
CKAP4-202ENST00000552828 EIF1AXP47813 144 aaKnown RBP10.58□□□□□ -0.72
CKAP4-202ENST00000552828 PRIM2P49643 509 aa10.58□□□□□ -0.72
CKAP4-202ENST00000552828 CTBP2P56545 445 aa10.58□□□□□ -0.72
CKAP4-202ENST00000552828 STX1BP61266 288 aa10.58□□□□□ -0.72
CKAP4-202ENST00000552828 RAC1P63000 192 aa10.58□□□□□ -0.72
CKAP4-202ENST00000552828 PHC1P78364 1004 aa10.58□□□□□ -0.72
CKAP4-202ENST00000552828 LRRC74AQ0VAA2 488 aa10.58□□□□□ -0.72
CKAP4-202ENST00000552828 GRAMD1BQ3KR37 738 aa10.58□□□□□ -0.72
CKAP4-202ENST00000552828 BEND4Q6ZU67 534 aa10.58□□□□□ -0.72
CKAP4-202ENST00000552828 ANKRD46Q86W74 232 aa10.58□□□□□ -0.72
CKAP4-202ENST00000552828 CLECL1Q8IZS7 167 aa10.58□□□□□ -0.72
CKAP4-202ENST00000552828 OR4A15Q8NGL6 344 aa10.58□□□□□ -0.72
CKAP4-202ENST00000552828 OR10D3Q8NH80 312 aa10.58□□□□□ -0.72
CKAP4-202ENST00000552828 SFXN5Q8TD22 340 aa10.58□□□□□ -0.72
CKAP4-202ENST00000552828 GPR151Q8TDV0 419 aa10.58□□□□□ -0.72
CKAP4-202ENST00000552828 STON2Q8WXE9 905 aa10.58□□□□□ -0.72
CKAP4-202ENST00000552828 ZBTB8AQ96BR9 441 aa10.58□□□□□ -0.72
CKAP4-202ENST00000552828 GIMAP5Q96F15 307 aa10.58□□□□□ -0.72
CKAP4-202ENST00000552828 THOC1Q96FV9 657 aaKnown RBP10.58□□□□□ -0.72
CKAP4-202ENST00000552828 OR52E6Q96RD3 313 aa10.58□□□□□ -0.72
CKAP4-202ENST00000552828 CCDC134Q9H6E4 229 aa10.58□□□□□ -0.72
CKAP4-202ENST00000552828 CXorf36Q9H7Y0 433 aa10.58□□□□□ -0.72
CKAP4-202ENST00000552828 NPHS2Q9NP85 383 aa10.58□□□□□ -0.72
CKAP4-202ENST00000552828 DSCAMO60469 2012 aa10.58□□□□□ -0.72
CKAP4-202ENST00000552828 CUBNO60494 3623 aa10.58□□□□□ -0.72
CKAP4-202ENST00000552828 SONP18583 2426 aaKnown RBP10.57□□□□□ -0.72
CKAP4-202ENST00000552828 A0A0G2JND7 137 aa10.57□□□□□ -0.72
CKAP4-202ENST00000552828 GXYLT2A0PJZ3 443 aa10.57□□□□□ -0.72
CKAP4-202ENST00000552828 C9JVG2 144 aa10.57□□□□□ -0.72
CKAP4-202ENST00000552828 OVOL3O00110 214 aa10.57□□□□□ -0.72
CKAP4-202ENST00000552828 NKX2-2O95096 273 aa10.57□□□□□ -0.72
CKAP4-202ENST00000552828 KCNH1O95259 989 aa10.57□□□□□ -0.72
CKAP4-202ENST00000552828 PLGP00747 810 aaPredicted RBP10.57□□□□□ -0.72
CKAP4-202ENST00000552828 HMGN2P05204 90 aaKnown RBP10.57□□□□□ -0.72
CKAP4-202ENST00000552828 KRT16P08779 473 aa10.57□□□□□ -0.72
CKAP4-202ENST00000552828 ALOX5P09917 674 aa10.57□□□□□ -0.72
CKAP4-202ENST00000552828 TROVE2P10155 538 aaKnown RBP eCLIP10.57□□□□□ -0.72
CKAP4-202ENST00000552828 NID1P14543 1247 aa10.57□□□□□ -0.72
CKAP4-202ENST00000552828 IL12AP29459 219 aa10.57□□□□□ -0.72
CKAP4-202ENST00000552828 SOAT1P35610 550 aa10.57□□□□□ -0.72
CKAP4-202ENST00000552828 MRPL19P49406 292 aaKnown RBP10.57□□□□□ -0.72
CKAP4-202ENST00000552828 POLR2JP52435 117 aaKnown RBP10.57□□□□□ -0.72
CKAP4-202ENST00000552828 ATP5J2P56134 94 aa10.57□□□□□ -0.72
CKAP4-202ENST00000552828 IRX1P78414 480 aaPredicted RBP10.57□□□□□ -0.72
CKAP4-202ENST00000552828 TNK1Q13470 666 aa10.57□□□□□ -0.72
CKAP4-202ENST00000552828 TP53BP2Q13625 1128 aa10.57□□□□□ -0.72
CKAP4-202ENST00000552828 LASP1Q14847 261 aaKnown RBP10.57□□□□□ -0.72
CKAP4-202ENST00000552828 MFSD12Q6NUT3 480 aa10.57□□□□□ -0.72
CKAP4-202ENST00000552828 GALNT10Q86SR1 603 aa10.57□□□□□ -0.72
CKAP4-202ENST00000552828 OR4C3Q8NH37 302 aa10.57□□□□□ -0.72
CKAP4-202ENST00000552828 OR2V1Q8NHB1 315 aa10.57□□□□□ -0.72
CKAP4-202ENST00000552828 RFWD2Q8NHY2 731 aa10.57□□□□□ -0.72
CKAP4-202ENST00000552828 FAM110BQ8TC76 370 aa10.57□□□□□ -0.72
CKAP4-202ENST00000552828 SLC9A6Q92581 669 aa10.57□□□□□ -0.72
CKAP4-202ENST00000552828 JADE3Q92613 823 aa10.57□□□□□ -0.72
CKAP4-202ENST00000552828 PLPPR2Q96GM1 343 aa10.57□□□□□ -0.72
CKAP4-202ENST00000552828 C16orf58Q96GQ5 468 aa10.57□□□□□ -0.72
CKAP4-202ENST00000552828 PRRG4Q9BZD6 226 aa10.57□□□□□ -0.72
CKAP4-202ENST00000552828 ACTR6Q9GZN1 396 aa10.57□□□□□ -0.72
CKAP4-202ENST00000552828 FGFR1OP2Q9NVK5 253 aa10.57□□□□□ -0.72
CKAP4-202ENST00000552828 BTNL2Q9UIR0 455 aa10.57□□□□□ -0.72
CKAP4-202ENST00000552828 MCTS1Q9ULC4 181 aaKnown RBP10.57□□□□□ -0.72
CKAP4-202ENST00000552828 CLEC4AQ9UMR7 237 aa10.57□□□□□ -0.72
CKAP4-202ENST00000552828 FAF1Q9UNN5 650 aaPredicted RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms