RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 SNAP47Q5SQN1 464 aa12.91□□□□□ -0.34
RAB3IP-216ENST00000552199 ULK3Q6PHR2 472 aa12.91□□□□□ -0.34
RAB3IP-216ENST00000552199 LAPTM4BQ86VI4 370 aa12.91□□□□□ -0.34
RAB3IP-216ENST00000552199 GID4Q8IVV7 300 aa12.91□□□□□ -0.34
RAB3IP-216ENST00000552199 ZNF485Q8NCK3 441 aa12.91□□□□□ -0.34
RAB3IP-216ENST00000552199 TM9SF4Q92544 642 aa12.91□□□□□ -0.34
RAB3IP-216ENST00000552199 TRMT61AQ96FX7 289 aaKnown RBP12.91□□□□□ -0.34
RAB3IP-216ENST00000552199 SLC41A2Q96JW4 573 aa12.91□□□□□ -0.34
RAB3IP-216ENST00000552199 SIAEQ9HAT2 523 aa12.91□□□□□ -0.34
RAB3IP-216ENST00000552199 MN1Q10571 1320 aaPredicted RBP12.91□□□□□ -0.34
RAB3IP-216ENST00000552199 FAM183AA6NL82 134 aa12.9□□□□□ -0.34
RAB3IP-216ENST00000552199 ZNF670-ZNF695F2Z2N8 137 aa12.9□□□□□ -0.34
RAB3IP-216ENST00000552199 CSTAP01040 98 aa12.9□□□□□ -0.34
RAB3IP-216ENST00000552199 IGHA1P01876 353 aa12.9□□□□□ -0.34
RAB3IP-216ENST00000552199 NGFRP08138 427 aa12.9□□□□□ -0.34
RAB3IP-216ENST00000552199 OCM2P0CE71 109 aa12.9□□□□□ -0.34
RAB3IP-216ENST00000552199 OCMP0CE72 109 aaPredicted RBP12.9□□□□□ -0.34
RAB3IP-216ENST00000552199 MYF5P13349 255 aa12.9□□□□□ -0.34
RAB3IP-216ENST00000552199 FOLR1P15328 257 aa12.9□□□□□ -0.34
RAB3IP-216ENST00000552199 FOSL2P15408 326 aa12.9□□□□□ -0.34
RAB3IP-216ENST00000552199 S100A5P33763 92 aa12.9□□□□□ -0.34
RAB3IP-216ENST00000552199 RPS19P39019 145 aaKnown RBP12.9□□□□□ -0.34
RAB3IP-216ENST00000552199 SLC37A1P57057 533 aa12.9□□□□□ -0.34
RAB3IP-216ENST00000552199 FOXK2Q01167 660 aa12.9□□□□□ -0.34
RAB3IP-216ENST00000552199 SLC35F1Q5T1Q4 408 aa12.9□□□□□ -0.34
RAB3IP-216ENST00000552199 PLBD1Q6P4A8 553 aa12.9□□□□□ -0.34
RAB3IP-216ENST00000552199 KIRREL2Q6UWL6 708 aa12.9□□□□□ -0.34
RAB3IP-216ENST00000552199 QSOX2Q6ZRP7 698 aa12.9□□□□□ -0.34
RAB3IP-216ENST00000552199 MEPCEQ7L2J0 689 aaKnown RBP12.9□□□□□ -0.34
RAB3IP-216ENST00000552199 LHFPL3Q86UP9 236 aa12.9□□□□□ -0.34
RAB3IP-216ENST00000552199 TMEM151BQ8IW70 566 aa12.9□□□□□ -0.34
RAB3IP-216ENST00000552199 CADM2Q8N3J6 435 aa12.9□□□□□ -0.34
RAB3IP-216ENST00000552199 OTULINQ96BN8 352 aa12.9□□□□□ -0.34
RAB3IP-216ENST00000552199 ARHGAP9Q9BRR9 750 aa12.9□□□□□ -0.34
RAB3IP-216ENST00000552199 IFT27Q9BW83 186 aa12.9□□□□□ -0.34
RAB3IP-216ENST00000552199 JAM3Q9BX67 310 aa12.9□□□□□ -0.34
RAB3IP-216ENST00000552199 DHCR7Q9UBM7 475 aaKnown RBP12.9□□□□□ -0.34
RAB3IP-216ENST00000552199 RPS6KB2Q9UBS0 482 aa12.9□□□□□ -0.34
RAB3IP-216ENST00000552199 PEX16Q9Y5Y5 336 aa12.9□□□□□ -0.34
RAB3IP-216ENST00000552199 TRAV27A0A087WT01 109 aa12.9□□□□□ -0.35
RAB3IP-216ENST00000552199 IGKV3D-11A0A0A0MRZ8 115 aa12.9□□□□□ -0.35
RAB3IP-216ENST00000552199 FAM86C2PA6NEL3 165 aa12.9□□□□□ -0.35
RAB3IP-216ENST00000552199 A8MUA0 341 aa12.9□□□□□ -0.35
RAB3IP-216ENST00000552199 CBFA2T3O75081 653 aa12.9□□□□□ -0.35
RAB3IP-216ENST00000552199 CD79BP40259 229 aa12.9□□□□□ -0.35
RAB3IP-216ENST00000552199 PPICP45877 212 aa12.9□□□□□ -0.35
RAB3IP-216ENST00000552199 SHBQ15464 509 aa12.9□□□□□ -0.35
RAB3IP-216ENST00000552199 NDUFAF6Q330K2 333 aa12.9□□□□□ -0.35
RAB3IP-216ENST00000552199 PLK5Q496M5 336 aa12.9□□□□□ -0.35
RAB3IP-216ENST00000552199 KLHL26Q53HC5 615 aa12.9□□□□□ -0.35
RAB3IP-216ENST00000552199 PRAMEF17Q5VTA0 474 aa12.9□□□□□ -0.35
RAB3IP-216ENST00000552199 NIPAL3Q6P499 406 aa12.9□□□□□ -0.35
RAB3IP-216ENST00000552199 PRSS42Q7Z5A4 293 aa12.9□□□□□ -0.35
RAB3IP-216ENST00000552199 SNX29P2Q8IUI4 249 aa12.9□□□□□ -0.35
RAB3IP-216ENST00000552199 ZNF321PQ8N8H1 164 aa12.9□□□□□ -0.35
RAB3IP-216ENST00000552199 PSD4Q8NDX1 1056 aa12.9□□□□□ -0.35
RAB3IP-216ENST00000552199 OR51A7Q8NH64 312 aa12.9□□□□□ -0.35
RAB3IP-216ENST00000552199 TSLPQ969D9 159 aa12.9□□□□□ -0.35
RAB3IP-216ENST00000552199 SLC46A1Q96NT5 459 aa12.9□□□□□ -0.35
RAB3IP-216ENST00000552199 ZNF649Q9BS31 505 aa12.9□□□□□ -0.35
RAB3IP-216ENST00000552199 NDC1Q9BTX1 674 aa12.9□□□□□ -0.35
RAB3IP-216ENST00000552199 MED20Q9H944 212 aa12.9□□□□□ -0.35
RAB3IP-216ENST00000552199 CMC2Q9NRP2 79 aa12.9□□□□□ -0.35
RAB3IP-216ENST00000552199 TNFRSF10DQ9UBN6 386 aa12.9□□□□□ -0.35
RAB3IP-216ENST00000552199 SF3B6Q9Y3B4 125 aaKnown RBP12.9□□□□□ -0.35
RAB3IP-216ENST00000552199 NUP210LQ5VU65 1888 aa12.89□□□□□ -0.35
RAB3IP-216ENST00000552199 A0A075B6Q4 140 aa12.89□□□□□ -0.35
RAB3IP-216ENST00000552199 A8MU76 341 aa12.89□□□□□ -0.35
RAB3IP-216ENST00000552199 J3QRE1 110 aa12.89□□□□□ -0.35
RAB3IP-216ENST00000552199 PRKNO60260 465 aaPredicted RBP12.89□□□□□ -0.35
RAB3IP-216ENST00000552199 ATP6V1E1P36543 226 aa12.89□□□□□ -0.35
RAB3IP-216ENST00000552199 RGS19P49795 217 aa12.89□□□□□ -0.35
RAB3IP-216ENST00000552199 PERM1Q5SV97 790 aa12.89□□□□□ -0.35
RAB3IP-216ENST00000552199 WDR74Q6RFH5 385 aaPredicted RBP12.89□□□□□ -0.35
RAB3IP-216ENST00000552199 Q7L0L9 218 aa12.89□□□□□ -0.35
RAB3IP-216ENST00000552199 OAFQ86UD1 273 aa12.89□□□□□ -0.35
RAB3IP-216ENST00000552199 KMT5CQ86Y97 462 aa12.89□□□□□ -0.35
RAB3IP-216ENST00000552199 ZNF440Q8IYI8 595 aa12.89□□□□□ -0.35
RAB3IP-216ENST00000552199 GPR135Q8IZ08 494 aa12.89□□□□□ -0.35
RAB3IP-216ENST00000552199 KLHL36Q8N4N3 616 aa12.89□□□□□ -0.35
RAB3IP-216ENST00000552199 UFD1Q92890 307 aa12.89□□□□□ -0.35
RAB3IP-216ENST00000552199 EFHD2Q96C19 240 aaPredicted RBP12.89□□□□□ -0.35
RAB3IP-216ENST00000552199 CLIP3Q96DZ5 547 aa12.89□□□□□ -0.35
RAB3IP-216ENST00000552199 TNFRSF13CQ96RJ3 184 aa12.89□□□□□ -0.35
RAB3IP-216ENST00000552199 LMF1Q96S06 567 aa12.89□□□□□ -0.35
RAB3IP-216ENST00000552199 SECISBP2Q96T21 854 aaKnown RBP12.89□□□□□ -0.35
RAB3IP-216ENST00000552199 ELF4Q99607 663 aaPredicted RBP12.89□□□□□ -0.35
RAB3IP-216ENST00000552199 MROQ9BYG7 248 aa12.89□□□□□ -0.35
RAB3IP-216ENST00000552199 HOXD1Q9GZZ0 328 aa12.89□□□□□ -0.35
RAB3IP-216ENST00000552199 NUAK2Q9H093 628 aa12.89□□□□□ -0.35
RAB3IP-216ENST00000552199 ZNF304Q9HCX3 659 aa12.89□□□□□ -0.35
RAB3IP-216ENST00000552199 TXNL4BQ9NX01 149 aaKnown RBP12.89□□□□□ -0.35
RAB3IP-216ENST00000552199 ERVK13-1Q9NX77 482 aa12.89□□□□□ -0.35
RAB3IP-216ENST00000552199 QPCTLQ9NXS2 382 aa12.89□□□□□ -0.35
RAB3IP-216ENST00000552199 SERTAD3Q9UJW9 196 aa12.89□□□□□ -0.35
RAB3IP-216ENST00000552199 BAIAP2Q9UQB8 552 aa12.89□□□□□ -0.35
RAB3IP-216ENST00000552199 SLC35A3Q9Y2D2 325 aa12.89□□□□□ -0.35
RAB3IP-216ENST00000552199 UNC13CQ8NB66 2214 aa12.89□□□□□ -0.35
RAB3IP-216ENST00000552199 SYNDIG1LA6NDD5 238 aa12.88□□□□□ -0.35
RAB3IP-216ENST00000552199 POLR1CO15160 346 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms