RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 SYCE2Q6PIF2 218 aa5.57□□□□□ -1.52
VPS29-210ENST00000552130 PAQR6Q6TCH4 344 aa5.57□□□□□ -1.52
VPS29-210ENST00000552130 ENPP6Q6UWR7 440 aa5.57□□□□□ -1.52
VPS29-210ENST00000552130 C5orf24Q7Z6I8 188 aa5.57□□□□□ -1.52
VPS29-210ENST00000552130 C17orf64Q86WR6 236 aa5.57□□□□□ -1.52
VPS29-210ENST00000552130 HPS6Q86YV9 775 aa5.57□□□□□ -1.52
VPS29-210ENST00000552130 CRLF3Q8IUI8 442 aa5.57□□□□□ -1.52
VPS29-210ENST00000552130 TMEM139Q8IV31 216 aa5.57□□□□□ -1.52
VPS29-210ENST00000552130 BOD1L2Q8IYS8 172 aa5.57□□□□□ -1.52
VPS29-210ENST00000552130 ZBED8Q8IZ13 594 aa5.57□□□□□ -1.52
VPS29-210ENST00000552130 C19orf18Q8NEA5 215 aa5.57□□□□□ -1.52
VPS29-210ENST00000552130 B3GNT7Q8NFL0 401 aa5.57□□□□□ -1.52
VPS29-210ENST00000552130 SLC35C1Q96A29 364 aa5.57□□□□□ -1.52
VPS29-210ENST00000552130 ZBTB9Q96C00 473 aa5.57□□□□□ -1.52
VPS29-210ENST00000552130 SNF8Q96H20 258 aa5.57□□□□□ -1.52
VPS29-210ENST00000552130 RNF170Q96K19 258 aa5.57□□□□□ -1.52
VPS29-210ENST00000552130 SERPINB11Q96P15 392 aa5.57□□□□□ -1.52
VPS29-210ENST00000552130 ULBP2Q9BZM5 246 aa5.57□□□□□ -1.52
VPS29-210ENST00000552130 NXF3Q9H4D5 531 aaKnown RBP5.57□□□□□ -1.52
VPS29-210ENST00000552130 TRIM45Q9H8W5 580 aaPredicted RBP5.57□□□□□ -1.52
VPS29-210ENST00000552130 MOV10Q9HCE1 1003 aaKnown RBP5.57□□□□□ -1.52
VPS29-210ENST00000552130 ANKHQ9HCJ1 492 aa5.57□□□□□ -1.52
VPS29-210ENST00000552130 ZC4H2Q9NQZ6 224 aa5.57□□□□□ -1.52
VPS29-210ENST00000552130 GDF3Q9NR23 364 aa5.57□□□□□ -1.52
VPS29-210ENST00000552130 NECAP2Q9NVZ3 263 aa5.57□□□□□ -1.52
VPS29-210ENST00000552130 GHRLQ9UBU3 117 aa5.57□□□□□ -1.52
VPS29-210ENST00000552130 KIF25Q9UIL4 384 aa5.57□□□□□ -1.52
VPS29-210ENST00000552130 ANAPC7Q9UJX3 599 aa5.57□□□□□ -1.52
VPS29-210ENST00000552130 NUP50Q9UKX7 468 aa5.57□□□□□ -1.52
VPS29-210ENST00000552130 POMT2Q9UKY4 750 aa5.57□□□□□ -1.52
VPS29-210ENST00000552130 SLC6A5Q9Y345 797 aa5.57□□□□□ -1.52
VPS29-210ENST00000552130 FADS3Q9Y5Q0 445 aa5.57□□□□□ -1.52
VPS29-210ENST00000552130 ANKRD30AQ9BXX3 1397 aa5.56□□□□□ -1.52
VPS29-210ENST00000552130 SMIM23A6NLE4 172 aa5.56□□□□□ -1.52
VPS29-210ENST00000552130 C2CD4BA6NLJ0 364 aa5.56□□□□□ -1.52
VPS29-210ENST00000552130 CENPXA8MT69 81 aa5.56□□□□□ -1.52
VPS29-210ENST00000552130 LRRN3E7EW58 273 aa5.56□□□□□ -1.52
VPS29-210ENST00000552130 GOLGA6L19H0YKK7 550 aa5.56□□□□□ -1.52
VPS29-210ENST00000552130 H3BN98 237 aa5.56□□□□□ -1.52
VPS29-210ENST00000552130 INSIG1O15503 277 aa5.56□□□□□ -1.52
VPS29-210ENST00000552130 TAPBPO15533 448 aa5.56□□□□□ -1.52
VPS29-210ENST00000552130 MLNRO43193 412 aa5.56□□□□□ -1.52
VPS29-210ENST00000552130 HSBP1O75506 76 aa5.56□□□□□ -1.52
VPS29-210ENST00000552130 FARS2O95363 451 aaKnown RBP5.56□□□□□ -1.52
VPS29-210ENST00000552130 APOHP02749 345 aaPredicted RBP5.56□□□□□ -1.52
VPS29-210ENST00000552130 IL6P05231 212 aa5.56□□□□□ -1.52
VPS29-210ENST00000552130 GSTA1P08263 222 aa5.56□□□□□ -1.52
VPS29-210ENST00000552130 CD3GP09693 182 aa5.56□□□□□ -1.52
VPS29-210ENST00000552130 H2BFMP0C1H6 154 aa5.56□□□□□ -1.52
VPS29-210ENST00000552130 CTXN2P0C2S0 81 aa5.56□□□□□ -1.52
VPS29-210ENST00000552130 SMIM10L1P0DMW3 83 aa5.56□□□□□ -1.52
VPS29-210ENST00000552130 PGAM1P18669 254 aa5.56□□□□□ -1.52
VPS29-210ENST00000552130 AOC1P19801 751 aa5.56□□□□□ -1.52
VPS29-210ENST00000552130 BGNP21810 368 aa5.56□□□□□ -1.52
VPS29-210ENST00000552130 HMGB2P26583 209 aaKnown RBP5.56□□□□□ -1.52
VPS29-210ENST00000552130 KDELR2P33947 212 aa5.56□□□□□ -1.52
VPS29-210ENST00000552130 UGT1A3P35503 534 aa5.56□□□□□ -1.52
VPS29-210ENST00000552130 MAGEA2P43356 314 aa5.56□□□□□ -1.52
VPS29-210ENST00000552130 TGM4P49221 684 aa5.56□□□□□ -1.52
VPS29-210ENST00000552130 SERPINB9P50453 376 aa5.56□□□□□ -1.52
VPS29-210ENST00000552130 GTF2A1P52655 376 aaPredicted RBP5.56□□□□□ -1.52
VPS29-210ENST00000552130 AP3S2P59780 193 aa5.56□□□□□ -1.52
VPS29-210ENST00000552130 ISL1P61371 349 aa5.56□□□□□ -1.52
VPS29-210ENST00000552130 RPL10AP62906 217 aaKnown RBP5.56□□□□□ -1.52
VPS29-210ENST00000552130 KLRC3Q07444 240 aa5.56□□□□□ -1.52
VPS29-210ENST00000552130 FAM189A2Q15884 450 aa5.56□□□□□ -1.52
VPS29-210ENST00000552130 TNXAQ16473 311 aa5.56□□□□□ -1.52
VPS29-210ENST00000552130 PPP1R3AQ16821 1122 aa5.56□□□□□ -1.52
VPS29-210ENST00000552130 QRICH1Q2TAL8 776 aa5.56□□□□□ -1.52
VPS29-210ENST00000552130 KLHL38Q2WGJ6 581 aa5.56□□□□□ -1.52
VPS29-210ENST00000552130 BEAN1Q3B7T3 259 aa5.56□□□□□ -1.52
VPS29-210ENST00000552130 PAN3Q58A45 887 aaKnown RBP5.56□□□□□ -1.52
VPS29-210ENST00000552130 SAMD4BQ5PRF9 694 aaKnown RBP5.56□□□□□ -1.52
VPS29-210ENST00000552130 BEND3Q5T5X7 828 aa5.56□□□□□ -1.52
VPS29-210ENST00000552130 DHRS11Q6UWP2 260 aa5.56□□□□□ -1.52
VPS29-210ENST00000552130 TMPRSS11AQ6ZMR5 421 aa5.56□□□□□ -1.52
VPS29-210ENST00000552130 GLCCI1Q86VQ1 547 aa5.56□□□□□ -1.52
VPS29-210ENST00000552130 MCOLN2Q8IZK6 566 aa5.56□□□□□ -1.52
VPS29-210ENST00000552130 GBGT1Q8N5D6 347 aa5.56□□□□□ -1.52
VPS29-210ENST00000552130 TTC29Q8NA56 475 aaPredicted RBP5.56□□□□□ -1.52
VPS29-210ENST00000552130 CCDC112Q8NEF3 446 aa5.56□□□□□ -1.52
VPS29-210ENST00000552130 DMBX1Q8NFW5 382 aa5.56□□□□□ -1.52
VPS29-210ENST00000552130 OR52I1Q8NGK6 324 aa5.56□□□□□ -1.52
VPS29-210ENST00000552130 OR4C15Q8NGM1 316 aa5.56□□□□□ -1.52
VPS29-210ENST00000552130 CCDC26Q8TAB7 109 aa5.56□□□□□ -1.52
VPS29-210ENST00000552130 MAGEE2Q8TD90 523 aaPredicted RBP5.56□□□□□ -1.52
VPS29-210ENST00000552130 PIGTQ969N2 578 aa5.56□□□□□ -1.52
VPS29-210ENST00000552130 SMIM10Q96HG1 83 aa5.56□□□□□ -1.52
VPS29-210ENST00000552130 C10orf90Q96M02 699 aa5.56□□□□□ -1.52
VPS29-210ENST00000552130 ERGIC2Q96RQ1 377 aa5.56□□□□□ -1.52
VPS29-210ENST00000552130 NXF5Q9H1B4 397 aaKnown RBP5.56□□□□□ -1.52
VPS29-210ENST00000552130 UPF3AQ9H1J1 476 aaKnown RBP5.56□□□□□ -1.52
VPS29-210ENST00000552130 KLHL31Q9H511 634 aa5.56□□□□□ -1.52
VPS29-210ENST00000552130 WDR54Q9H977 334 aa5.56□□□□□ -1.52
VPS29-210ENST00000552130 FOLH1BQ9HBA9 442 aa5.56□□□□□ -1.52
VPS29-210ENST00000552130 FGF21Q9NSA1 209 aa5.56□□□□□ -1.52
VPS29-210ENST00000552130 GPATCH2LQ9NWQ4 482 aa5.56□□□□□ -1.52
VPS29-210ENST00000552130 C3orf18Q9UK00 162 aa5.56□□□□□ -1.52
VPS29-210ENST00000552130 NXT1Q9UKK6 140 aaKnown RBP5.56□□□□□ -1.52
VPS29-210ENST00000552130 LOC105371267A0A1B0GV96 52 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms