RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 OR2W5A6NFC9 320 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 TMEM200CA6NKL6 621 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 SUPT3HB4E1H0 165 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 FAM157AC9JC47 383 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 F8VVB4 439 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 F8VWA3 439 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 J3QRE1 110 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 CLIC1O00299 241 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 MANBAO00462 879 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 GABRPO00591 440 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 LRRTM2O43300 516 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 SSNA1O43805 119 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 SH3BGRLO75368 114 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 ULK1O75385 1050 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 LY86O95711 162 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 MOCS2O96007 188 aaPredicted RBP4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 GASTP01350 101 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 CD8AP01732 235 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 HLA-DPB1P04440 258 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 HLA-DQB2P05538 268 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 SRPRAP08240 638 aaKnown RBP4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 MMP2P08253 660 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 ACP2P11117 423 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 SLC25A4P12235 298 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 APEHP13798 732 aaKnown RBP4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 MPZP25189 248 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 RPL3P39023 403 aaKnown RBP4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 RAD52P43351 418 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 PCP4P48539 62 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 SRP9P49458 86 aaKnown RBP4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 CCR6P51684 374 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 ZNF140P52738 457 aaPredicted RBP4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 ADPRHP54922 357 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 CASP6P55212 293 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 OSTNP61366 133 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 PKIAP61925 76 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 RPS14P62263 151 aaKnown RBP4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 MBTD1Q05BQ5 628 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 FABP9Q0Z7S8 132 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 GAGE1Q13065 139 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 ZNF345Q14585 488 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 SMCO1Q147U7 214 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 IFI44LQ53G44 452 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 SYT14P1Q58G82 188 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 CRB2Q5IJ48 1285 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 JMJD6Q6NYC1 403 aaPredicted RBP4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 NCEH1Q6PIU2 408 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 IL27RAQ6UWB1 636 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 ETV3LQ6ZN32 361 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 UBE2R2Q712K3 238 aaPredicted RBP4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 GOLGA7Q7Z5G4 137 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 CAMKMTQ7Z624 323 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 MARCH9Q86YJ5 346 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 LRRC52Q8N7C0 313 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 PNPLA1Q8N8W4 532 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 RELL2Q8NC24 303 aaPredicted RBP4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 HJURPQ8NCD3 748 aaPredicted RBP4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 SDR9C7Q8NEX9 313 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 OR4A4PQ8NGN8 299 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 OR10J5Q8NHC4 309 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 THAP6Q8TBB0 222 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 METTL6Q8TCB7 284 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 ACER1Q8TDN7 264 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 SMAP2Q8WU79 429 aaPredicted RBP4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 MYLIPQ8WY64 445 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 ROBO4Q8WZ75 1007 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 NELL1Q92832 810 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 R3HDM4Q96D70 268 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 C1GALT1C1Q96EU7 318 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 KIRREL1Q96J84 757 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 LRR1Q96L50 414 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 ZNF582Q96NG8 517 aaPredicted RBP4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 TRIB3Q96RU7 358 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 PCYT2Q99447 389 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 C19orf43Q9BQ61 176 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 ZPBPQ9BS86 351 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 CHST5Q9GZS9 411 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 COA1Q9GZY4 146 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 WDR13Q9H1Z4 485 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 HRASLSQ9HDD0 168 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 TMEM138Q9NPI0 162 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 ACSS1Q9NUB1 689 aaPredicted RBP4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 PARPBPQ9NWS1 579 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 BTG4Q9NY30 223 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 TAS2R13Q9NYV9 303 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 TAS2R3Q9NYW6 316 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 DNAJC27Q9NZQ0 273 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 CLEC1BQ9P126 229 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 RCC2Q9P258 522 aaKnown RBP4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 ZNF70Q9UC06 446 aaPredicted RBP4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 PISDQ9UG56 409 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 EXOGQ9Y2C4 368 aaKnown RBP4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 PLEKHA6Q9Y2H5 1048 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 TIMM10BQ9Y5J6 103 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 NPFFR2Q9Y5X5 522 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 ANK1P16157 1881 aa4.91□□□□□ -1.62
LSM3P2-201ENST00000551246 TBC1D3DA0A087WVF3 549 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 TBC1D3IA0A087WXS9 549 aa4.9□□□□□ -1.63
LSM3P2-201ENST00000551246 TBC1D3EA0A087X179 549 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms