RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 ZNF678Q5SXM1 525 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 FHL5Q5TD97 284 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 RTL6Q6ICC9 239 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 FAM180BQ6P0A1 224 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 NPSR1Q6W5P4 371 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 FRA10AC1Q70Z53 315 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 TRILQ7L0X0 811 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 ABHD13Q7L211 337 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 GALNTL5Q7Z4T8 443 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 IGFN1Q86VF2 1251 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 ZNF595Q8IYB9 648 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 METTL4Q8N3J2 472 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 TCAIMQ8N3R3 496 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 ZADH2Q8N4Q0 377 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 IQCF1Q8N6M8 205 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 ZNF615Q8N8J6 731 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 SNX31Q8N9S9 440 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 ZFP62Q8NB50 900 aaPredicted RBP4.42□□□□□ -1.7
SCAF11-214ENST00000550893 OR2T11Q8NH01 316 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 STAG3L4Q8TBR4 150 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 AGAP11Q8TF27 550 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 AENQ8WTP8 325 aaKnown RBP4.42□□□□□ -1.7
SCAF11-214ENST00000550893 CDKL2Q92772 493 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 NEUROG1Q92886 237 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 PPWD1Q96BP3 646 aaKnown RBP4.42□□□□□ -1.7
SCAF11-214ENST00000550893 PHF21BQ96EK2 531 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 L3HYPDHQ96EM0 354 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 FCRL1Q96LA6 429 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 GPR137Q96N19 417 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 LPAR4Q99677 370 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 RHOXF2Q9BQY4 288 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 H2AFJQ9BTM1 129 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 KRTAP2-2Q9BYT5 123 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 ACPTQ9BZG2 426 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 ILKAPQ9H0C8 392 aaPredicted RBP4.42□□□□□ -1.7
SCAF11-214ENST00000550893 TUBB1Q9H4B7 451 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 NOL11Q9H8H0 719 aaKnown RBP4.42□□□□□ -1.7
SCAF11-214ENST00000550893 ZDHHC11Q9H8X9 412 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 ANKRA2Q9H9E1 313 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 CLK4Q9HAZ1 481 aaKnown RBP4.42□□□□□ -1.7
SCAF11-214ENST00000550893 NMRAL1Q9HBL8 299 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 ADAP2Q9NPF8 381 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 KRCC1Q9NPI7 259 aaPredicted RBP4.42□□□□□ -1.7
SCAF11-214ENST00000550893 KLHL1Q9NR64 748 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 PRTFDC1Q9NRG1 225 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 SPRR3Q9UBC9 169 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 OPTCQ9UBM4 332 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 FETUBQ9UGM5 382 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 TINAGQ9UJW2 476 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 C19orf53Q9UNZ5 99 aaPredicted RBP4.42□□□□□ -1.7
SCAF11-214ENST00000550893 RCE1Q9Y256 329 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 FAM215AQ9Y5M1 114 aa4.42□□□□□ -1.7
SCAF11-214ENST00000550893 CHCHD2Q9Y6H1 151 aaPredicted RBP4.42□□□□□ -1.7
SCAF11-214ENST00000550893 MED13LQ71F56 2210 aa4.41□□□□□ -1.7
SCAF11-214ENST00000550893 CREBBPQ92793 2442 aa4.41□□□□□ -1.7
SCAF11-214ENST00000550893 G3V3Y1 287 aa4.41□□□□□ -1.7
SCAF11-214ENST00000550893 GOLGA8RI6L899 631 aa4.41□□□□□ -1.7
SCAF11-214ENST00000550893 FOXE1O00358 373 aaPredicted RBP4.41□□□□□ -1.7
SCAF11-214ENST00000550893 LRRTM2O43300 516 aa4.41□□□□□ -1.7
SCAF11-214ENST00000550893 PLIN3O60664 434 aa4.41□□□□□ -1.7
SCAF11-214ENST00000550893 CTNSO60931 367 aa4.41□□□□□ -1.7
SCAF11-214ENST00000550893 SLC25A12O75746 678 aa4.41□□□□□ -1.7
SCAF11-214ENST00000550893 OR2J2O76002 312 aa4.41□□□□□ -1.7
SCAF11-214ENST00000550893 OR4F21O95013 312 aa4.41□□□□□ -1.7
SCAF11-214ENST00000550893 LRATO95237 230 aa4.41□□□□□ -1.7
SCAF11-214ENST00000550893 PDYNP01213 254 aa4.41□□□□□ -1.7
SCAF11-214ENST00000550893 C1QCP02747 245 aa4.41□□□□□ -1.7
SCAF11-214ENST00000550893 SP1P08047 785 aa4.41□□□□□ -1.7
SCAF11-214ENST00000550893 TYK2P29597 1187 aa4.41□□□□□ -1.7
SCAF11-214ENST00000550893 HSD17B3P37058 310 aa4.41□□□□□ -1.7
SCAF11-214ENST00000550893 HTR3AP46098 478 aa4.41□□□□□ -1.7
SCAF11-214ENST00000550893 HLCSP50747 726 aa4.41□□□□□ -1.7
SCAF11-214ENST00000550893 STXBP1P61764 594 aaKnown RBP4.41□□□□□ -1.7
SCAF11-214ENST00000550893 ARG2P78540 354 aa4.41□□□□□ -1.7
SCAF11-214ENST00000550893 ROR2Q01974 943 aaKnown RBP4.41□□□□□ -1.7
SCAF11-214ENST00000550893 SLC18A2Q05940 514 aa4.41□□□□□ -1.7
SCAF11-214ENST00000550893 FUT7Q11130 342 aa4.41□□□□□ -1.7
SCAF11-214ENST00000550893 CUL3Q13618 768 aa4.41□□□□□ -1.7
SCAF11-214ENST00000550893 DDX39BQ13838 428 aaKnown RBP4.41□□□□□ -1.7
SCAF11-214ENST00000550893 KIAA0040Q15053 153 aa4.41□□□□□ -1.7
SCAF11-214ENST00000550893 LTB4RQ15722 352 aa4.41□□□□□ -1.7
SCAF11-214ENST00000550893 CEBPEQ15744 281 aa4.41□□□□□ -1.7
SCAF11-214ENST00000550893 UGT3A2Q3SY77 523 aa4.41□□□□□ -1.7
SCAF11-214ENST00000550893 TNFAIP8L3Q5GJ75 292 aa4.41□□□□□ -1.7
SCAF11-214ENST00000550893 DCST1Q5T197 706 aa4.41□□□□□ -1.7
SCAF11-214ENST00000550893 LIPJQ5W064 366 aa4.41□□□□□ -1.7
SCAF11-214ENST00000550893 OR4C11Q6IEV9 310 aa4.41□□□□□ -1.7
SCAF11-214ENST00000550893 LIN54Q6MZP7 749 aa4.41□□□□□ -1.7
SCAF11-214ENST00000550893 MED27Q6P2C8 311 aa4.41□□□□□ -1.7
SCAF11-214ENST00000550893 MTFR2Q6P444 385 aa4.41□□□□□ -1.7
SCAF11-214ENST00000550893 KLHL17Q6TDP4 642 aa4.41□□□□□ -1.7
SCAF11-214ENST00000550893 TMEM64Q6YI46 380 aa4.41□□□□□ -1.7
SCAF11-214ENST00000550893 RNF144BQ7Z419 303 aa4.41□□□□□ -1.7
SCAF11-214ENST00000550893 COMMD6Q7Z4G1 85 aa4.41□□□□□ -1.7
SCAF11-214ENST00000550893 TBC1D1Q86TI0 1168 aaPredicted RBP4.41□□□□□ -1.7
SCAF11-214ENST00000550893 RPS19BP1Q86WX3 136 aaKnown RBP4.41□□□□□ -1.7
SCAF11-214ENST00000550893 TDRPQ86YL5 185 aa4.41□□□□□ -1.7
SCAF11-214ENST00000550893 TICAM1Q8IUC6 712 aa4.41□□□□□ -1.7
SCAF11-214ENST00000550893 PRR26Q8N8Z3 221 aa4.41□□□□□ -1.7
SCAF11-214ENST00000550893 TTLQ8NG68 377 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms