RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 WASHC1A8K0Z3 465 aa3.8□□□□□ -1.8
LIMA1-205ENST00000550592 LOC730098B7Z3J9 87 aa3.8□□□□□ -1.8
LIMA1-205ENST00000550592 TM9SF1O15321 606 aa3.8□□□□□ -1.8
LIMA1-205ENST00000550592 KBTBD11O94819 623 aa3.8□□□□□ -1.8
LIMA1-205ENST00000550592 OR4F21O95013 312 aa3.8□□□□□ -1.8
LIMA1-205ENST00000550592 GUCA1CO95843 209 aa3.8□□□□□ -1.8
LIMA1-205ENST00000550592 FAM200BP0CF97 657 aa3.8□□□□□ -1.8
LIMA1-205ENST00000550592 GSTT2P0CG29 244 aa3.8□□□□□ -1.8
LIMA1-205ENST00000550592 GSTT2BP0CG30 244 aa3.8□□□□□ -1.8
LIMA1-205ENST00000550592 UQCRBP14927 111 aa3.8□□□□□ -1.8
LIMA1-205ENST00000550592 PVRP15151 417 aa3.8□□□□□ -1.8
LIMA1-205ENST00000550592 TNNI3P19429 210 aa3.8□□□□□ -1.8
LIMA1-205ENST00000550592 EIF2S2P20042 333 aaKnown RBP3.8□□□□□ -1.8
LIMA1-205ENST00000550592 BCL3P20749 454 aa3.8□□□□□ -1.8
LIMA1-205ENST00000550592 GATA2P23769 480 aaPredicted RBP3.8□□□□□ -1.8
LIMA1-205ENST00000550592 TRPC1P48995 793 aa3.8□□□□□ -1.8
LIMA1-205ENST00000550592 RPL34P49207 117 aaKnown RBP3.8□□□□□ -1.8
LIMA1-205ENST00000550592 ACLYP53396 1101 aa3.8□□□□□ -1.8
LIMA1-205ENST00000550592 TFDP1Q14186 410 aa3.8□□□□□ -1.8
LIMA1-205ENST00000550592 RAB35Q15286 201 aa3.8□□□□□ -1.8
LIMA1-205ENST00000550592 ANGPT1Q15389 498 aa3.8□□□□□ -1.8
LIMA1-205ENST00000550592 ZNF311Q5JNZ3 666 aa3.8□□□□□ -1.8
LIMA1-205ENST00000550592 PNCKQ6P2M8 343 aa3.8□□□□□ -1.8
LIMA1-205ENST00000550592 NIPAL3Q6P499 406 aa3.8□□□□□ -1.8
LIMA1-205ENST00000550592 BTNL3Q6UXE8 466 aa3.8□□□□□ -1.8
LIMA1-205ENST00000550592 TMEM184AQ6ZMB5 413 aa3.8□□□□□ -1.8
LIMA1-205ENST00000550592 ZNF600Q6ZNG1 722 aa3.8□□□□□ -1.8
LIMA1-205ENST00000550592 PRSS48Q7RTY5 328 aa3.8□□□□□ -1.8
LIMA1-205ENST00000550592 MYPOPQ86VE0 399 aaPredicted RBP3.8□□□□□ -1.8
LIMA1-205ENST00000550592 SLC22A18ASQ8N1D0 253 aa3.8□□□□□ -1.8
LIMA1-205ENST00000550592 OR2L2Q8NH16 312 aa3.8□□□□□ -1.8
LIMA1-205ENST00000550592 TSGA13Q96PP4 275 aa3.8□□□□□ -1.8
LIMA1-205ENST00000550592 PORCNQ9H237 461 aa3.8□□□□□ -1.8
LIMA1-205ENST00000550592 SLC35D1Q9NTN3 355 aa3.8□□□□□ -1.8
LIMA1-205ENST00000550592 AGPAT5Q9NUQ2 364 aa3.8□□□□□ -1.8
LIMA1-205ENST00000550592 DHRS4-AS1Q9P1J3 65 aa3.8□□□□□ -1.8
LIMA1-205ENST00000550592 ARMCX1Q9P291 453 aa3.8□□□□□ -1.8
LIMA1-205ENST00000550592 CHMP2BQ9UQN3 213 aa3.8□□□□□ -1.8
LIMA1-205ENST00000550592 RNF6Q9Y252 685 aa3.8□□□□□ -1.8
LIMA1-205ENST00000550592 EIF3LQ9Y262 564 aaKnown RBP3.8□□□□□ -1.8
LIMA1-205ENST00000550592 KIF3AQ9Y496 699 aa3.8□□□□□ -1.8
LIMA1-205ENST00000550592 PHIPQ8WWQ0 1821 aa3.79□□□□□ -1.8
LIMA1-205ENST00000550592 SPTA1P02549 2419 aa3.79□□□□□ -1.8
LIMA1-205ENST00000550592 SDHDO14521 159 aa3.79□□□□□ -1.8
LIMA1-205ENST00000550592 NDC80O14777 642 aa3.79□□□□□ -1.8
LIMA1-205ENST00000550592 PHF1O43189 567 aaPredicted RBP3.79□□□□□ -1.8
LIMA1-205ENST00000550592 LRRTM2O43300 516 aa3.79□□□□□ -1.8
LIMA1-205ENST00000550592 SRPX2O60687 465 aaPredicted RBP3.79□□□□□ -1.8
LIMA1-205ENST00000550592 RAMP1O60894 148 aa3.79□□□□□ -1.8
LIMA1-205ENST00000550592 NOL3O60936 208 aaKnown RBP3.79□□□□□ -1.8
LIMA1-205ENST00000550592 PGK1P00558 417 aa3.79□□□□□ -1.8
LIMA1-205ENST00000550592 HPP00738 406 aa3.79□□□□□ -1.8
LIMA1-205ENST00000550592 ACADSP16219 412 aa3.79□□□□□ -1.8
LIMA1-205ENST00000550592 PTMSP20962 102 aa3.79□□□□□ -1.8
LIMA1-205ENST00000550592 CYLC1P35663 651 aaPredicted RBP3.79□□□□□ -1.8
LIMA1-205ENST00000550592 PTGER3P43115 390 aa3.79□□□□□ -1.8
LIMA1-205ENST00000550592 HMGCS2P54868 508 aa3.79□□□□□ -1.8
LIMA1-205ENST00000550592 CCL23P55773 120 aa3.79□□□□□ -1.8
LIMA1-205ENST00000550592 SLC8A3P57103 927 aa3.79□□□□□ -1.8
LIMA1-205ENST00000550592 RPS6P62753 249 aaKnown RBP3.79□□□□□ -1.8
LIMA1-205ENST00000550592 KLHL30Q0D2K2 578 aa3.79□□□□□ -1.8
LIMA1-205ENST00000550592 CRMP1Q14194 572 aa3.79□□□□□ -1.8
LIMA1-205ENST00000550592 TRIP10Q15642 601 aa3.79□□□□□ -1.8
LIMA1-205ENST00000550592 PPP1R3AQ16821 1122 aa3.79□□□□□ -1.8
LIMA1-205ENST00000550592 MICAQ29983 383 aa3.79□□□□□ -1.8
LIMA1-205ENST00000550592 HIGD2BQ4VC39 106 aa3.79□□□□□ -1.8
LIMA1-205ENST00000550592 TMEM41BQ5BJD5 291 aa3.79□□□□□ -1.8
LIMA1-205ENST00000550592 RIPPLY2Q5TAB7 128 aa3.79□□□□□ -1.8
LIMA1-205ENST00000550592 ERASQ7Z444 233 aa3.79□□□□□ -1.8
LIMA1-205ENST00000550592 CEACAM19Q7Z692 300 aa3.79□□□□□ -1.8
LIMA1-205ENST00000550592 ZNF573Q86YE8 665 aa3.79□□□□□ -1.8
LIMA1-205ENST00000550592 EFCAB13Q8IY85 973 aa3.79□□□□□ -1.8
LIMA1-205ENST00000550592 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.79□□□□□ -1.8
LIMA1-205ENST00000550592 ELMO2Q96JJ3 720 aa3.79□□□□□ -1.8
LIMA1-205ENST00000550592 GLT1D1Q96MS3 346 aa3.79□□□□□ -1.8
LIMA1-205ENST00000550592 TBCDQ9BTW9 1192 aa3.79□□□□□ -1.8
LIMA1-205ENST00000550592 RPP25Q9BUL9 199 aaKnown RBP3.79□□□□□ -1.8
LIMA1-205ENST00000550592 TBC1D10AQ9BXI6 508 aa3.79□□□□□ -1.8
LIMA1-205ENST00000550592 MFSD1Q9H3U5 465 aa3.79□□□□□ -1.8
LIMA1-205ENST00000550592 POLD4Q9HCU8 107 aa3.79□□□□□ -1.8
LIMA1-205ENST00000550592 FAM120CQ9NX05 1096 aaKnown RBP3.79□□□□□ -1.8
LIMA1-205ENST00000550592 IMPAD1Q9NX62 359 aa3.79□□□□□ -1.8
LIMA1-205ENST00000550592 SH3BGRL2Q9UJC5 107 aa3.79□□□□□ -1.8
LIMA1-205ENST00000550592 NTNG1Q9Y2I2 539 aa3.79□□□□□ -1.8
LIMA1-205ENST00000550592 AP1M2Q9Y6Q5 423 aa3.79□□□□□ -1.8
LIMA1-205ENST00000550592 DMXL1Q9Y485 3027 aa3.79□□□□□ -1.8
LIMA1-205ENST00000550592 MYO7AQ13402 2215 aa3.79□□□□□ -1.8
LIMA1-205ENST00000550592 MYO15AQ9UKN7 3530 aa3.79□□□□□ -1.8
LIMA1-205ENST00000550592 TRIOO75962 3097 aa3.79□□□□□ -1.8
LIMA1-205ENST00000550592 ASXL3Q9C0F0 2248 aa3.78□□□□□ -1.8
LIMA1-205ENST00000550592 DOPEY1Q5JWR5 2465 aa3.78□□□□□ -1.8
LIMA1-205ENST00000550592 A0A087WWV3 80 aa3.78□□□□□ -1.8
LIMA1-205ENST00000550592 ZNF840PA6NDX5 716 aa3.78□□□□□ -1.8
LIMA1-205ENST00000550592 LRRC30A6NM36 301 aa3.78□□□□□ -1.8
LIMA1-205ENST00000550592 E9PAM4 449 aa3.78□□□□□ -1.8
LIMA1-205ENST00000550592 PEX11AO75192 247 aa3.78□□□□□ -1.8
LIMA1-205ENST00000550592 TBX6O95947 436 aaPredicted RBP3.78□□□□□ -1.8
LIMA1-205ENST00000550592 PIGRP01833 764 aa3.78□□□□□ -1.8
LIMA1-205ENST00000550592 CALCBP10092 127 aa3.78□□□□□ -1.8
LIMA1-205ENST00000550592 HTR2AP28223 471 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms