RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 OR4D11Q8NGI4 311 aa19.23■□□□□ 0.67
VPS29-206ENST00000549578 OR14L1PQ8NHC6 308 aa19.23■□□□□ 0.67
VPS29-206ENST00000549578 VANGL1Q8TAA9 524 aaPredicted RBP19.23■□□□□ 0.67
VPS29-206ENST00000549578 PROX1Q92786 737 aa19.23■□□□□ 0.67
VPS29-206ENST00000549578 NPAS1Q99742 590 aa19.23■□□□□ 0.67
VPS29-206ENST00000549578 ARHGDIGQ99819 225 aa19.23■□□□□ 0.67
VPS29-206ENST00000549578 OR2B2Q9GZK3 357 aa19.23■□□□□ 0.67
VPS29-206ENST00000549578 SLC6A15Q9H2J7 730 aa19.23■□□□□ 0.67
VPS29-206ENST00000549578 MUC13Q9H3R2 512 aa19.23■□□□□ 0.67
VPS29-206ENST00000549578 DCAF13Q9NV06 445 aaKnown RBP19.23■□□□□ 0.67
VPS29-206ENST00000549578 SLC7A8Q9UHI5 535 aa19.23■□□□□ 0.67
VPS29-206ENST00000549578 SH3GLB1Q9Y371 365 aa19.23■□□□□ 0.67
VPS29-206ENST00000549578 V9GYQ6 96 aa19.23■□□□□ 0.67
VPS29-206ENST00000549578 ACOT8O14734 319 aa19.22■□□□□ 0.67
VPS29-206ENST00000549578 C8BP07358 591 aa19.22■□□□□ 0.67
VPS29-206ENST00000549578 LINGO3P0C6S8 592 aa19.22■□□□□ 0.67
VPS29-206ENST00000549578 SLC6A8P48029 635 aa19.22■□□□□ 0.67
VPS29-206ENST00000549578 ZNF136P52737 540 aa19.22■□□□□ 0.67
VPS29-206ENST00000549578 RGS8P57771 180 aaPredicted RBP19.22■□□□□ 0.67
VPS29-206ENST00000549578 ELOAQ14241 798 aaKnown RBP19.22■□□□□ 0.67
VPS29-206ENST00000549578 QPRTQ15274 297 aa19.22■□□□□ 0.67
VPS29-206ENST00000549578 NRF1Q16656 503 aa19.22■□□□□ 0.67
VPS29-206ENST00000549578 ZNF550Q7Z398 422 aa19.22■□□□□ 0.67
VPS29-206ENST00000549578 FAM86B1Q8N7N1 296 aa19.22■□□□□ 0.67
VPS29-206ENST00000549578 OR5M1Q8NGP8 315 aa19.22■□□□□ 0.67
VPS29-206ENST00000549578 CPT1CQ8TCG5 803 aa19.22■□□□□ 0.67
VPS29-206ENST00000549578 LZICQ8WZA0 190 aa19.22■□□□□ 0.67
VPS29-206ENST00000549578 HSH2DQ96JZ2 352 aa19.22■□□□□ 0.67
VPS29-206ENST00000549578 RNF145Q96MT1 663 aa19.22■□□□□ 0.67
VPS29-206ENST00000549578 AGPAT4Q9NRZ5 378 aa19.22■□□□□ 0.67
VPS29-206ENST00000549578 RPS6KA6Q9UK32 745 aa19.22■□□□□ 0.67
VPS29-206ENST00000549578 CFAP46Q8IYW2 2715 aa19.22■□□□□ 0.67
VPS29-206ENST00000549578 SVILO95425 2214 aa19.22■□□□□ 0.67
VPS29-206ENST00000549578 ZNF407Q9C0G0 2248 aa19.22■□□□□ 0.67
VPS29-206ENST00000549578 FAM47E-STBD1D6RA91 191 aa19.21■□□□□ 0.67
VPS29-206ENST00000549578 WISP1O95388 367 aa19.21■□□□□ 0.67
VPS29-206ENST00000549578 PGCP20142 388 aa19.21■□□□□ 0.67
VPS29-206ENST00000549578 OR1E2P47887 323 aa19.21■□□□□ 0.67
VPS29-206ENST00000549578 IDH2P48735 452 aaKnown RBP19.21■□□□□ 0.67
VPS29-206ENST00000549578 LCN8Q6JVE9 175 aa19.21■□□□□ 0.67
VPS29-206ENST00000549578 RBM45Q8IUH3 476 aaKnown RBP19.21■□□□□ 0.67
VPS29-206ENST00000549578 OR6T1Q8NGN1 323 aa19.21■□□□□ 0.67
VPS29-206ENST00000549578 ZNF563Q8TA94 476 aa19.21■□□□□ 0.67
VPS29-206ENST00000549578 SLC35B4Q969S0 331 aa19.21■□□□□ 0.67
VPS29-206ENST00000549578 UTP4Q969X6 686 aaKnown RBP19.21■□□□□ 0.67
VPS29-206ENST00000549578 DTNBP1Q96EV8 351 aa19.21■□□□□ 0.67
VPS29-206ENST00000549578 BARD1Q99728 777 aaKnown RBP19.21■□□□□ 0.67
VPS29-206ENST00000549578 SLX1AQ9BQ83 275 aa19.21■□□□□ 0.67
VPS29-206ENST00000549578 PRR14Q9BWN1 585 aa19.21■□□□□ 0.67
VPS29-206ENST00000549578 MMADHCQ9H3L0 296 aaPredicted RBP19.21■□□□□ 0.67
VPS29-206ENST00000549578 ACKR4Q9NPB9 350 aa19.21■□□□□ 0.67
VPS29-206ENST00000549578 POMPQ9Y244 141 aa19.21■□□□□ 0.67
VPS29-206ENST00000549578 MED12Q93074 2177 aa19.21■□□□□ 0.67
VPS29-206ENST00000549578 A0A087WZY1 265 aa19.2■□□□□ 0.66
VPS29-206ENST00000549578 C1QL1O75973 258 aa19.2■□□□□ 0.66
VPS29-206ENST00000549578 PRKD3O94806 890 aa19.2■□□□□ 0.66
VPS29-206ENST00000549578 TDGF1P3P51864 188 aa19.2■□□□□ 0.66
VPS29-206ENST00000549578 HSF1Q00613 529 aa19.2■□□□□ 0.66
VPS29-206ENST00000549578 FOXF1Q12946 379 aa19.2■□□□□ 0.66
VPS29-206ENST00000549578 NPTX1Q15818 432 aa19.2■□□□□ 0.66
VPS29-206ENST00000549578 RAET1LQ5VY80 246 aa19.2■□□□□ 0.66
VPS29-206ENST00000549578 ENPP6Q6UWR7 440 aa19.2■□□□□ 0.66
VPS29-206ENST00000549578 LSRQ86X29 649 aaPredicted RBP19.2■□□□□ 0.66
VPS29-206ENST00000549578 CARM1Q86X55 608 aa19.2■□□□□ 0.66
VPS29-206ENST00000549578 EID3Q8N140 333 aa19.2■□□□□ 0.66
VPS29-206ENST00000549578 ZNF843Q8N446 348 aa19.2■□□□□ 0.66
VPS29-206ENST00000549578 GPR137Q96N19 417 aa19.2■□□□□ 0.66
VPS29-206ENST00000549578 LDAHQ9H6V9 325 aa19.2■□□□□ 0.66
VPS29-206ENST00000549578 SAMD4AQ9UPU9 718 aaKnown RBP19.2■□□□□ 0.66
VPS29-206ENST00000549578 SLC9A8Q9Y2E8 581 aa19.2■□□□□ 0.66
VPS29-206ENST00000549578 SLC6A5Q9Y345 797 aa19.2■□□□□ 0.66
VPS29-206ENST00000549578 MRPS18CQ9Y3D5 142 aaKnown RBP19.2■□□□□ 0.66
VPS29-206ENST00000549578 TRGV5A0A0B4J1U4 118 aa19.2■□□□□ 0.66
VPS29-206ENST00000549578 TPST2O60704 377 aa19.2■□□□□ 0.66
VPS29-206ENST00000549578 IGHG3P01860 377 aa19.2■□□□□ 0.66
VPS29-206ENST00000549578 PRKCAP17252 672 aa19.2■□□□□ 0.66
VPS29-206ENST00000549578 SESN3P58005 492 aa19.2■□□□□ 0.66
VPS29-206ENST00000549578 TRAP1Q12931 704 aaKnown RBP19.2■□□□□ 0.66
VPS29-206ENST00000549578 FKBP9P1Q75LS8 142 aa19.2■□□□□ 0.66
VPS29-206ENST00000549578 TRILQ7L0X0 811 aa19.2■□□□□ 0.66
VPS29-206ENST00000549578 OR52E4Q8NGH9 312 aa19.2■□□□□ 0.66
VPS29-206ENST00000549578 POC1BQ8TC44 478 aa19.2■□□□□ 0.66
VPS29-206ENST00000549578 EXO5Q9H790 373 aa19.2■□□□□ 0.66
VPS29-206ENST00000549578 ERICH4A6NGS2 130 aa19.19■□□□□ 0.66
VPS29-206ENST00000549578 ZNHIT1O43257 154 aa19.19■□□□□ 0.66
VPS29-206ENST00000549578 DNAJC13O75165 2243 aa19.19■□□□□ 0.66
VPS29-206ENST00000549578 STAMBPO95630 424 aa19.19■□□□□ 0.66
VPS29-206ENST00000549578 UQCRBP14927 111 aa19.19■□□□□ 0.66
VPS29-206ENST00000549578 HTR2AP28223 471 aa19.19■□□□□ 0.66
VPS29-206ENST00000549578 B3GALT5-AS1P59052 145 aa19.19■□□□□ 0.66
VPS29-206ENST00000549578 IFI44LQ53G44 452 aa19.19■□□□□ 0.66
VPS29-206ENST00000549578 CADM2Q8N3J6 435 aa19.19■□□□□ 0.66
VPS29-206ENST00000549578 ZBTB8AQ96BR9 441 aa19.19■□□□□ 0.66
VPS29-206ENST00000549578 LRGUKQ96M69 825 aa19.19■□□□□ 0.66
VPS29-206ENST00000549578 SFXN2Q96NB2 322 aa19.19■□□□□ 0.66
VPS29-206ENST00000549578 TNFRSF10DQ9UBN6 386 aa19.19■□□□□ 0.66
VPS29-206ENST00000549578 TESQ9UGI8 421 aaKnown RBP19.19■□□□□ 0.66
VPS29-206ENST00000549578 TNFSF12-TNFSF13A0A0A6YY99 330 aa19.18■□□□□ 0.66
VPS29-206ENST00000549578 TCRBV5S2A0A599 114 aa19.18■□□□□ 0.66
VPS29-206ENST00000549578 OR2M5A3KFT3 312 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms