RNA–Protein interactions for RNA: ENST00000549205.1

ERBB3-208, Transcript of erb-b2 receptor tyrosine kinase 3, human

TSL 5

Gene ERBB3, Length 971 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERBB3-208	ENST00000549205	HRH3	Q9Y5N1	445 aa		11.15	□□□□□ -0.62
ERBB3-208	ENST00000549205	GTF3C1	Q12789	2109 aa		11.15	□□□□□ -0.62
ERBB3-208	ENST00000549205	BSN	Q9UPA5	3926 aa		11.15	□□□□□ -0.63
ERBB3-208	ENST00000549205	KIAA1549	Q9HCM3	1950 aa		11.14	□□□□□ -0.63
ERBB3-208	ENST00000549205		A0A0G2JMM0	328 aa		11.14	□□□□□ -0.63
ERBB3-208	ENST00000549205		A0A1B0GWA3	101 aa		11.14	□□□□□ -0.63
ERBB3-208	ENST00000549205		A0A1W2PPB8	328 aa		11.14	□□□□□ -0.63
ERBB3-208	ENST00000549205		A0A1W2PRQ8	180 aa		11.14	□□□□□ -0.63
ERBB3-208	ENST00000549205		A0A1W2PRS3	328 aa		11.14	□□□□□ -0.63
ERBB3-208	ENST00000549205	TRAPPC13	A5PLN9	417 aa		11.14	□□□□□ -0.63
ERBB3-208	ENST00000549205	ANKUB1	A6NFN9	424 aa		11.14	□□□□□ -0.63
ERBB3-208	ENST00000549205	KIR3DP1	A8MWS1	328 aa		11.14	□□□□□ -0.63
ERBB3-208	ENST00000549205		B4DXG7	233 aa		11.14	□□□□□ -0.63
ERBB3-208	ENST00000549205		G3V3Y1	287 aa		11.14	□□□□□ -0.63
ERBB3-208	ENST00000549205	CASQ2	O14958	399 aa	Predicted RBP	11.14	□□□□□ -0.63
ERBB3-208	ENST00000549205	SNPH	O15079	494 aa		11.14	□□□□□ -0.63
ERBB3-208	ENST00000549205	TRIM3	O75382	744 aa	Predicted RBP	11.14	□□□□□ -0.63
ERBB3-208	ENST00000549205	E2F6	O75461	281 aa		11.14	□□□□□ -0.63
ERBB3-208	ENST00000549205	H1F0	P07305	194 aa	Known RBP	11.14	□□□□□ -0.63
ERBB3-208	ENST00000549205	THRB	P10828	461 aa		11.14	□□□□□ -0.63
ERBB3-208	ENST00000549205	PGC	P20142	388 aa		11.14	□□□□□ -0.63
ERBB3-208	ENST00000549205	CNR1	P21554	472 aa		11.14	□□□□□ -0.63
ERBB3-208	ENST00000549205	IFNA8	P32881	189 aa		11.14	□□□□□ -0.63
ERBB3-208	ENST00000549205	CDH12	P55289	794 aa		11.14	□□□□□ -0.63
ERBB3-208	ENST00000549205	COPZ1	P61923	177 aa		11.14	□□□□□ -0.63
ERBB3-208	ENST00000549205	ARG2	P78540	354 aa		11.14	□□□□□ -0.63
ERBB3-208	ENST00000549205	DGCR6	Q14129	220 aa		11.14	□□□□□ -0.63
ERBB3-208	ENST00000549205	GANAB	Q14697	944 aa	Known RBP	11.14	□□□□□ -0.63
ERBB3-208	ENST00000549205	TBR1	Q16650	682 aa		11.14	□□□□□ -0.63
ERBB3-208	ENST00000549205	WBP2NL	Q6ICG8	309 aa		11.14	□□□□□ -0.63
ERBB3-208	ENST00000549205	ZNF613	Q6PF04	617 aa		11.14	□□□□□ -0.63
ERBB3-208	ENST00000549205	PACS2	Q86VP3	889 aa		11.14	□□□□□ -0.63
ERBB3-208	ENST00000549205	FADS6	Q8N9I5	356 aa		11.14	□□□□□ -0.63
ERBB3-208	ENST00000549205	WDSUB1	Q8N9V3	476 aa		11.14	□□□□□ -0.63
ERBB3-208	ENST00000549205	OR2M3	Q8NG83	312 aa		11.14	□□□□□ -0.63
ERBB3-208	ENST00000549205	GPR119	Q8TDV5	335 aa		11.14	□□□□□ -0.63
ERBB3-208	ENST00000549205	SLC41A3	Q96GZ6	507 aa		11.14	□□□□□ -0.63
ERBB3-208	ENST00000549205	TMEM41A	Q96HV5	264 aa		11.14	□□□□□ -0.63
ERBB3-208	ENST00000549205	EPYC	Q99645	322 aa		11.14	□□□□□ -0.63
ERBB3-208	ENST00000549205	KLHDC3	Q9BQ90	382 aa		11.14	□□□□□ -0.63
ERBB3-208	ENST00000549205	RASSF4	Q9H2L5	321 aa		11.14	□□□□□ -0.63
ERBB3-208	ENST00000549205	NMNAT1	Q9HAN9	279 aa	Predicted RBP	11.14	□□□□□ -0.63
ERBB3-208	ENST00000549205	TMEM27	Q9HBJ8	222 aa		11.14	□□□□□ -0.63
ERBB3-208	ENST00000549205	CTPS2	Q9NRF8	586 aa		11.14	□□□□□ -0.63
ERBB3-208	ENST00000549205	MAN2C1	Q9NTJ4	1040 aa		11.14	□□□□□ -0.63
ERBB3-208	ENST00000549205	DEPP	Q9NTK1	212 aa		11.14	□□□□□ -0.63
ERBB3-208	ENST00000549205	MED11	Q9P086	117 aa		11.14	□□□□□ -0.63
ERBB3-208	ENST00000549205	RHCG	Q9UBD6	479 aa		11.14	□□□□□ -0.63
ERBB3-208	ENST00000549205	STOML1	Q9UBI4	398 aa		11.14	□□□□□ -0.63
ERBB3-208	ENST00000549205	RPS6KB2	Q9UBS0	482 aa		11.14	□□□□□ -0.63
ERBB3-208	ENST00000549205	SAMHD1	Q9Y3Z3	626 aa	Known RBP	11.14	□□□□□ -0.63
ERBB3-208	ENST00000549205	LYVE1	Q9Y5Y7	322 aa		11.14	□□□□□ -0.63
ERBB3-208	ENST00000549205	IGSF10	Q6WRI0	2623 aa		11.14	□□□□□ -0.63
ERBB3-208	ENST00000549205	ALPK2	Q86TB3	2170 aa		11.13	□□□□□ -0.63
ERBB3-208	ENST00000549205		A0A0B4J2E0	115 aa		11.13	□□□□□ -0.63
ERBB3-208	ENST00000549205		A0A1B0GX12	115 aa		11.13	□□□□□ -0.63
ERBB3-208	ENST00000549205	TNFRSF11B	O00300	401 aa		11.13	□□□□□ -0.63
ERBB3-208	ENST00000549205	KALRN	O60229	2985 aa		11.13	□□□□□ -0.63
ERBB3-208	ENST00000549205	GMFG	O60234	142 aa		11.13	□□□□□ -0.63
ERBB3-208	ENST00000549205	NME2P1	O60361	137 aa		11.13	□□□□□ -0.63
ERBB3-208	ENST00000549205	GADD45G	O95257	159 aa		11.13	□□□□□ -0.63
ERBB3-208	ENST00000549205	LYPD3	O95274	346 aa		11.13	□□□□□ -0.63
ERBB3-208	ENST00000549205	NUDT14	O95848	222 aa		11.13	□□□□□ -0.63
ERBB3-208	ENST00000549205	THY1	P04216	161 aa		11.13	□□□□□ -0.63
ERBB3-208	ENST00000549205	SP1	P08047	785 aa		11.13	□□□□□ -0.63
ERBB3-208	ENST00000549205	CD46	P15529	392 aa		11.13	□□□□□ -0.63
ERBB3-208	ENST00000549205	FUT4	P22083	530 aa		11.13	□□□□□ -0.63
ERBB3-208	ENST00000549205	NME2	P22392	152 aa		11.13	□□□□□ -0.63
ERBB3-208	ENST00000549205	DNAJA1	P31689	397 aa	Known RBP	11.13	□□□□□ -0.63
ERBB3-208	ENST00000549205	SLC1A3	P43003	542 aa		11.13	□□□□□ -0.63
ERBB3-208	ENST00000549205	LIMS1	P48059	325 aa		11.13	□□□□□ -0.63
ERBB3-208	ENST00000549205	IDH2	P48735	452 aa	Known RBP	11.13	□□□□□ -0.63
ERBB3-208	ENST00000549205	MASP1	P48740	699 aa		11.13	□□□□□ -0.63
ERBB3-208	ENST00000549205	DNASE1L1	P49184	302 aa		11.13	□□□□□ -0.63
ERBB3-208	ENST00000549205	TNFSF10	P50591	281 aa		11.13	□□□□□ -0.63
ERBB3-208	ENST00000549205	HMGA2	P52926	109 aa		11.13	□□□□□ -0.63
ERBB3-208	ENST00000549205	IST1	P53990	364 aa		11.13	□□□□□ -0.63
ERBB3-208	ENST00000549205	ST3GAL3	Q11203	375 aa		11.13	□□□□□ -0.63
ERBB3-208	ENST00000549205	GK3P	Q14409	553 aa		11.13	□□□□□ -0.63
ERBB3-208	ENST00000549205	TRAM2	Q15035	370 aa		11.13	□□□□□ -0.63
ERBB3-208	ENST00000549205	TRIP10	Q15642	601 aa		11.13	□□□□□ -0.63
ERBB3-208	ENST00000549205	INPP5J	Q15735	1006 aa	Predicted RBP	11.13	□□□□□ -0.63
ERBB3-208	ENST00000549205	SNCB	Q16143	134 aa		11.13	□□□□□ -0.63
ERBB3-208	ENST00000549205	FGD3	Q5JSP0	725 aa		11.13	□□□□□ -0.63
ERBB3-208	ENST00000549205	COLEC12	Q5KU26	742 aa		11.13	□□□□□ -0.63
ERBB3-208	ENST00000549205	SWT1	Q5T5J6	900 aa	Known RBP	11.13	□□□□□ -0.63
ERBB3-208	ENST00000549205	TIGD3	Q6B0B8	471 aa		11.13	□□□□□ -0.63
ERBB3-208	ENST00000549205	IGFL3	Q6UXB1	125 aa		11.13	□□□□□ -0.63
ERBB3-208	ENST00000549205	GDF7	Q7Z4P5	450 aa		11.13	□□□□□ -0.63
ERBB3-208	ENST00000549205	TMEM179B	Q7Z7N9	219 aa		11.13	□□□□□ -0.63
ERBB3-208	ENST00000549205	PLCZ1	Q86YW0	608 aa		11.13	□□□□□ -0.63
ERBB3-208	ENST00000549205	CADM2	Q8N3J6	435 aa		11.13	□□□□□ -0.63
ERBB3-208	ENST00000549205	SVOPL	Q8N434	492 aa		11.13	□□□□□ -0.63
ERBB3-208	ENST00000549205	KDF1	Q8NAX2	398 aa	Predicted RBP	11.13	□□□□□ -0.63
ERBB3-208	ENST00000549205	ICA1L	Q8NDH6	482 aa		11.13	□□□□□ -0.63
ERBB3-208	ENST00000549205	OR4K17	Q8NGC6	315 aa		11.13	□□□□□ -0.63
ERBB3-208	ENST00000549205	OR4C15	Q8NGM1	316 aa		11.13	□□□□□ -0.63
ERBB3-208	ENST00000549205	DNAJA4	Q8WW22	397 aa	Predicted RBP	11.13	□□□□□ -0.63
ERBB3-208	ENST00000549205	ZNF597	Q96LX8	424 aa		11.13	□□□□□ -0.63
ERBB3-208	ENST00000549205	C5orf34	Q96MH7	638 aa		11.13	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms