RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 EPPINO95925 133 aa18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 CBX7O95931 251 aa18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 CT62P0C5K7 136 aa18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 CCDC159P0C7I6 412 aa18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 S1PR1P21453 382 aa18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 CD47Q08722 323 aa18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 SLC13A2Q13183 592 aa18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 DUSP8Q13202 625 aa18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 DGCR6Q14129 220 aa18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 ZNF770Q6IQ21 691 aaPredicted RBP18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 GALNT5Q7Z7M9 940 aa18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 GALNT12Q8IXK2 581 aa18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 TAGAPQ8N103 731 aa18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 OR51Q1Q8NH59 317 aa18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 SLC9A6Q92581 669 aa18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 PRRC1Q96M27 445 aa18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 OR1F2PQ96R84 312 aa18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 LMF2Q9BU23 707 aaKnown RBP18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 ZNF350Q9GZX5 532 aa18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 SLC26A1Q9H2B4 701 aa18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 CACYBPQ9HB71 228 aaKnown RBP18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 ADAP2Q9NPF8 381 aa18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 IRAK4Q9NWZ3 460 aa18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 KLHL28Q9NXS3 571 aa18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 PLA2G3Q9NZ20 509 aa18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 TINAGQ9UJW2 476 aa18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 A4GNTQ9UNA3 340 aa18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 ZNF232Q9UNY5 417 aa18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 MGAT4BQ9UQ53 548 aa18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 WDR45Q9Y484 360 aa18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 PCDHGB6Q9Y5F9 930 aa18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 CLDN16Q9Y5I7 305 aa18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 GMPPBQ9Y5P6 360 aa18.3■□□□□ 0.52
CTDSP2-204ENST00000548823 TMEM200CA6NKL6 621 aa18.29■□□□□ 0.52
CTDSP2-204ENST00000548823 ONECUT2O95948 504 aa18.29■□□□□ 0.52
CTDSP2-204ENST00000548823 ADAP00813 363 aa18.29■□□□□ 0.52
CTDSP2-204ENST00000548823 ATP6V1B1P15313 513 aa18.29■□□□□ 0.52
CTDSP2-204ENST00000548823 RPS4Y1P22090 263 aaKnown RBP18.29■□□□□ 0.52
CTDSP2-204ENST00000548823 ALAS2P22557 587 aa18.29■□□□□ 0.52
CTDSP2-204ENST00000548823 POLR2IP36954 125 aaKnown RBP18.29■□□□□ 0.52
CTDSP2-204ENST00000548823 STT3AP46977 705 aa18.29■□□□□ 0.52
CTDSP2-204ENST00000548823 STX4Q12846 297 aa18.29■□□□□ 0.52
CTDSP2-204ENST00000548823 DCST1Q5T197 706 aa18.29■□□□□ 0.52
CTDSP2-204ENST00000548823 FOXB2Q5VYV0 432 aa18.29■□□□□ 0.52
CTDSP2-204ENST00000548823 TYW3Q6IPR3 259 aaKnown RBP18.29■□□□□ 0.52
CTDSP2-204ENST00000548823 PEX5LQ8IYB4 626 aa18.29■□□□□ 0.52
CTDSP2-204ENST00000548823 ZNF619Q8N2I2 560 aa18.29■□□□□ 0.52
CTDSP2-204ENST00000548823 OR52P1PQ8NH57 321 aa18.29■□□□□ 0.52
CTDSP2-204ENST00000548823 RBM18Q96H35 190 aaKnown RBP18.29■□□□□ 0.52
CTDSP2-204ENST00000548823 ALOXE3Q9BYJ1 711 aa18.29■□□□□ 0.52
CTDSP2-204ENST00000548823 CXXC4Q9H2H0 198 aa18.29■□□□□ 0.52
CTDSP2-204ENST00000548823 ANKRD19PQ9H560 264 aa18.29■□□□□ 0.52
CTDSP2-204ENST00000548823 NXT1Q9UKK6 140 aaKnown RBP18.29■□□□□ 0.52
CTDSP2-204ENST00000548823 MAP1AP78559 2803 aaPredicted RBP18.28■□□□□ 0.52
CTDSP2-204ENST00000548823 STX11O75558 287 aa18.28■□□□□ 0.52
CTDSP2-204ENST00000548823 HPP00738 406 aa18.28■□□□□ 0.52
CTDSP2-204ENST00000548823 KLK2P20151 261 aa18.28■□□□□ 0.52
CTDSP2-204ENST00000548823 CRHBPP24387 322 aa18.28■□□□□ 0.52
CTDSP2-204ENST00000548823 GANABQ14697 944 aaKnown RBP18.28■□□□□ 0.52
CTDSP2-204ENST00000548823 LARS2Q15031 903 aaKnown RBP18.28■□□□□ 0.52
CTDSP2-204ENST00000548823 EIPR1Q53HC9 387 aa18.28■□□□□ 0.52
CTDSP2-204ENST00000548823 DCST2Q5T1A1 773 aa18.28■□□□□ 0.52
CTDSP2-204ENST00000548823 DEF8Q6ZN54 512 aa18.28■□□□□ 0.52
CTDSP2-204ENST00000548823 LACC1Q8IV20 430 aa18.28■□□□□ 0.52
CTDSP2-204ENST00000548823 SHISA5Q8N114 240 aa18.28■□□□□ 0.52
CTDSP2-204ENST00000548823 SIMC1Q8NDZ2 872 aa18.28■□□□□ 0.52
CTDSP2-204ENST00000548823 OR52J3Q8NH60 311 aa18.28■□□□□ 0.52
CTDSP2-204ENST00000548823 VANGL1Q8TAA9 524 aaPredicted RBP18.28■□□□□ 0.52
CTDSP2-204ENST00000548823 DGAT2Q96PD7 388 aa18.28■□□□□ 0.52
CTDSP2-204ENST00000548823 POLR2J2Q9GZM3 115 aaKnown RBP18.28■□□□□ 0.52
CTDSP2-204ENST00000548823 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.28■□□□□ 0.523e-7■□□□□ 11
CTDSP2-204ENST00000548823 POLR2J3Q9H1A7 115 aaKnown RBP18.28■□□□□ 0.52
CTDSP2-204ENST00000548823 TNFRSF10DQ9UBN6 386 aa18.28■□□□□ 0.52
CTDSP2-204ENST00000548823 SLC13A4Q9UKG4 626 aa18.28■□□□□ 0.52
CTDSP2-204ENST00000548823 ZNF835Q9Y2P0 537 aa18.28■□□□□ 0.52
CTDSP2-204ENST00000548823 MEMO1Q9Y316 297 aa18.28■□□□□ 0.52
CTDSP2-204ENST00000548823 SYNDIG1LA6NDD5 238 aa18.27■□□□□ 0.51
CTDSP2-204ENST00000548823 AGAP5A6NIR3 686 aa18.27■□□□□ 0.51
CTDSP2-204ENST00000548823 TGFBR3LH3BV60 316 aa18.27■□□□□ 0.51
CTDSP2-204ENST00000548823 DSCR3O14972 297 aa18.27■□□□□ 0.51
CTDSP2-204ENST00000548823 FCMRO60667 390 aa18.27■□□□□ 0.51
CTDSP2-204ENST00000548823 ELK4P28324 431 aa18.27■□□□□ 0.51
CTDSP2-204ENST00000548823 ESRRGP62508 458 aa18.27■□□□□ 0.51
CTDSP2-204ENST00000548823 CSNK2BP67870 215 aa18.27■□□□□ 0.51
CTDSP2-204ENST00000548823 RPP38P78345 283 aaKnown RBP18.27■□□□□ 0.51
CTDSP2-204ENST00000548823 POU6F2P78424 691 aaPredicted RBP18.27■□□□□ 0.51
CTDSP2-204ENST00000548823 MAT1AQ00266 395 aaKnown RBP18.27■□□□□ 0.51
CTDSP2-204ENST00000548823 IL1RL1Q01638 556 aa18.27■□□□□ 0.51
CTDSP2-204ENST00000548823 TEKQ02763 1124 aa18.27■□□□□ 0.51
CTDSP2-204ENST00000548823 CDK5R2Q13319 367 aa18.27■□□□□ 0.51
CTDSP2-204ENST00000548823 CTU2Q2VPK5 515 aaKnown RBP18.27■□□□□ 0.51
CTDSP2-204ENST00000548823 ZNF773Q6PK81 442 aa18.27■□□□□ 0.51
CTDSP2-204ENST00000548823 OLIG3Q7RTU3 272 aa18.27■□□□□ 0.51
CTDSP2-204ENST00000548823 COMTD1Q86VU5 262 aa18.27■□□□□ 0.51
CTDSP2-204ENST00000548823 RBM45Q8IUH3 476 aaKnown RBP18.27■□□□□ 0.51
CTDSP2-204ENST00000548823 COX18Q8N8Q8 333 aa18.27■□□□□ 0.51
CTDSP2-204ENST00000548823 OR6T1Q8NGN1 323 aa18.27■□□□□ 0.51
CTDSP2-204ENST00000548823 PSMF1Q92530 271 aa18.27■□□□□ 0.51
CTDSP2-204ENST00000548823 RIT1Q92963 219 aa18.27■□□□□ 0.51
CTDSP2-204ENST00000548823 FOXC2Q99958 501 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms