RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 TMEM201Q5SNT2 666 aa15.48■□□□□ 0.07
CHMP1A-205ENST00000548650 PDZK1Q5T2W1 519 aa15.48■□□□□ 0.07
CHMP1A-205ENST00000548650 GTF2IRD2BQ6EKJ0 949 aa15.48■□□□□ 0.07
CHMP1A-205ENST00000548650 FCRLAQ7L513 359 aa15.48■□□□□ 0.07
CHMP1A-205ENST00000548650 GTF2IRD2Q86UP8 949 aa15.48■□□□□ 0.07
CHMP1A-205ENST00000548650 TUSC5Q8IXB3 177 aa15.48■□□□□ 0.07
CHMP1A-205ENST00000548650 TMCO5AQ8N6Q1 288 aa15.48■□□□□ 0.07
CHMP1A-205ENST00000548650 OR5W2Q8NH69 310 aa15.48■□□□□ 0.07
CHMP1A-205ENST00000548650 S100PBPQ96BU1 408 aa15.48■□□□□ 0.07
CHMP1A-205ENST00000548650 REXO5Q96IC2 774 aaKnown RBP15.48■□□□□ 0.07
CHMP1A-205ENST00000548650 ZIM3Q96PE6 472 aa15.48■□□□□ 0.07
CHMP1A-205ENST00000548650 GP6Q9HCN6 339 aa15.48■□□□□ 0.07
CHMP1A-205ENST00000548650 TIGARQ9NQ88 270 aa15.48■□□□□ 0.07
CHMP1A-205ENST00000548650 NOP53Q9NZM5 478 aaKnown RBP15.48■□□□□ 0.07
CHMP1A-205ENST00000548650 KCNE5Q9UJ90 142 aa15.48■□□□□ 0.07
CHMP1A-205ENST00000548650 ING1Q9UK53 422 aaPredicted RBP15.48■□□□□ 0.07
CHMP1A-205ENST00000548650 RNF103-CHMP3A0A140T963 221 aa15.47■□□□□ 0.07
CHMP1A-205ENST00000548650 FAM171A2A8MVW0 826 aa15.47■□□□□ 0.07
CHMP1A-205ENST00000548650 GTPBP1O00178 669 aaKnown RBP15.47■□□□□ 0.07
CHMP1A-205ENST00000548650 ZNF264O43296 627 aa15.47■□□□□ 0.07
CHMP1A-205ENST00000548650 ITM2AO43736 263 aa15.47■□□□□ 0.07
CHMP1A-205ENST00000548650 EIF4E2O60573 245 aaKnown RBP15.47■□□□□ 0.07
CHMP1A-205ENST00000548650 DNAJA2O60884 412 aa15.47■□□□□ 0.07
CHMP1A-205ENST00000548650 H6PDO95479 791 aa15.47■□□□□ 0.07
CHMP1A-205ENST00000548650 LY6G6DO95868 133 aa15.47■□□□□ 0.07
CHMP1A-205ENST00000548650 PAX1P15863 534 aa15.47■□□□□ 0.07
CHMP1A-205ENST00000548650 CCR4P51679 360 aa15.47■□□□□ 0.07
CHMP1A-205ENST00000548650 QPRTQ15274 297 aa15.47■□□□□ 0.07
CHMP1A-205ENST00000548650 SMU1Q2TAY7 513 aa15.47■□□□□ 0.07
CHMP1A-205ENST00000548650 PGS1Q32NB8 556 aa15.47■□□□□ 0.07
CHMP1A-205ENST00000548650 OR4F3Q6IEY1 312 aa15.47■□□□□ 0.07
CHMP1A-205ENST00000548650 BHLHB9Q6PI77 547 aa15.47■□□□□ 0.07
CHMP1A-205ENST00000548650 PLEKHM3Q6ZWE6 761 aa15.47■□□□□ 0.07
CHMP1A-205ENST00000548650 OLIG3Q7RTU3 272 aa15.47■□□□□ 0.07
CHMP1A-205ENST00000548650 CLEC4FQ8N1N0 589 aa15.47■□□□□ 0.07
CHMP1A-205ENST00000548650 ZNF781Q8N8C0 355 aa15.47■□□□□ 0.07
CHMP1A-205ENST00000548650 ATP6V1C2Q8NEY4 427 aa15.47■□□□□ 0.07
CHMP1A-205ENST00000548650 TOR1AIP2Q8NFQ8 470 aa15.47■□□□□ 0.07
CHMP1A-205ENST00000548650 STEAP2Q8NFT2 490 aa15.47■□□□□ 0.07
CHMP1A-205ENST00000548650 RFWD2Q8NHY2 731 aa15.47■□□□□ 0.07
CHMP1A-205ENST00000548650 SLC35G5Q96KT7 338 aa15.47■□□□□ 0.07
CHMP1A-205ENST00000548650 TMEM109Q9BVC6 243 aa15.47■□□□□ 0.07
CHMP1A-205ENST00000548650 ZNF350Q9GZX5 532 aa15.47■□□□□ 0.07
CHMP1A-205ENST00000548650 CADP27708 2225 aa15.47■□□□□ 0.07
CHMP1A-205ENST00000548650 SERINC4A6NH21 518 aa15.46■□□□□ 0.07
CHMP1A-205ENST00000548650 RNASET2O00584 256 aaKnown RBP15.46■□□□□ 0.07
CHMP1A-205ENST00000548650 HS3ST1O14792 307 aa15.46■□□□□ 0.07
CHMP1A-205ENST00000548650 FCMRO60667 390 aa15.46■□□□□ 0.07
CHMP1A-205ENST00000548650 AK1P00568 194 aa15.46■□□□□ 0.07
CHMP1A-205ENST00000548650 SERPINE1P05121 402 aa15.46■□□□□ 0.07
CHMP1A-205ENST00000548650 ENPP1P22413 925 aa15.46■□□□□ 0.07
CHMP1A-205ENST00000548650 CBFBQ13951 182 aa15.46■□□□□ 0.07
CHMP1A-205ENST00000548650 TSC22D1Q15714 1073 aa15.46■□□□□ 0.07
CHMP1A-205ENST00000548650 ZNF141Q15928 474 aa15.46■□□□□ 0.07
CHMP1A-205ENST00000548650 C3orf33Q6P1S2 294 aa15.46■□□□□ 0.07
CHMP1A-205ENST00000548650 SEZ6L2Q6UXD5 910 aa15.46■□□□□ 0.07
CHMP1A-205ENST00000548650 NUDCD3Q8IVD9 361 aa15.46■□□□□ 0.07
CHMP1A-205ENST00000548650 ZNF611Q8N823 705 aa15.46■□□□□ 0.07
CHMP1A-205ENST00000548650 PPP1R36Q96LQ0 422 aa15.46■□□□□ 0.07
CHMP1A-205ENST00000548650 PSD2Q9BQI7 771 aa15.46■□□□□ 0.07
CHMP1A-205ENST00000548650 BCO1Q9HAY6 547 aa15.46■□□□□ 0.07
CHMP1A-205ENST00000548650 ZNF701Q9NV72 531 aaPredicted RBP15.46■□□□□ 0.07
CHMP1A-205ENST00000548650 JMJD1CQ15652 2540 aa15.46■□□□□ 0.06
CHMP1A-205ENST00000548650 IGHV3-15A0A0B4J1V0 119 aa15.45■□□□□ 0.06
CHMP1A-205ENST00000548650 A0A1W2PNR3 127 aa15.45■□□□□ 0.06
CHMP1A-205ENST00000548650 SMAD9O15198 467 aaKnown RBP15.45■□□□□ 0.06
CHMP1A-205ENST00000548650 KIAA0513O60268 411 aa15.45■□□□□ 0.06
CHMP1A-205ENST00000548650 SCN2BO60939 215 aa15.45■□□□□ 0.06
CHMP1A-205ENST00000548650 UGT2B17O75795 530 aa15.45■□□□□ 0.06
CHMP1A-205ENST00000548650 PRKD3O94806 890 aa15.45■□□□□ 0.06
CHMP1A-205ENST00000548650 MATN1P21941 496 aa15.45■□□□□ 0.06
CHMP1A-205ENST00000548650 SLC7A1P30825 629 aa15.45■□□□□ 0.06
CHMP1A-205ENST00000548650 RAC3P60763 192 aa15.45■□□□□ 0.06
CHMP1A-205ENST00000548650 GPR68Q15743 365 aa15.45■□□□□ 0.06
CHMP1A-205ENST00000548650 TAB1Q15750 504 aa15.45■□□□□ 0.06
CHMP1A-205ENST00000548650 CHI3L2Q15782 390 aa15.45■□□□□ 0.06
CHMP1A-205ENST00000548650 SFRP5Q5T4F7 317 aa15.45■□□□□ 0.06
CHMP1A-205ENST00000548650 HEPHL1Q6MZM0 1159 aa15.45■□□□□ 0.06
CHMP1A-205ENST00000548650 WDR93Q6P2C0 686 aa15.45■□□□□ 0.06
CHMP1A-205ENST00000548650 C6orf120Q7Z4R8 191 aa15.45■□□□□ 0.06
CHMP1A-205ENST00000548650 SLC43A2Q8N370 569 aa15.45■□□□□ 0.06
CHMP1A-205ENST00000548650 OR8J2Q8NGG1 315 aa15.45■□□□□ 0.06
CHMP1A-205ENST00000548650 RAB3IL1Q8TBN0 382 aa15.45■□□□□ 0.06
CHMP1A-205ENST00000548650 MIPOL1Q8TD10 442 aa15.45■□□□□ 0.06
CHMP1A-205ENST00000548650 TMEM171Q8WVE6 324 aa15.45■□□□□ 0.06
CHMP1A-205ENST00000548650 TACO1Q9BSH4 297 aaKnown RBP15.45■□□□□ 0.06
CHMP1A-205ENST00000548650 BDH2Q9BUT1 245 aa15.45■□□□□ 0.06
CHMP1A-205ENST00000548650 LAT2Q9GZY6 243 aa15.45■□□□□ 0.06
CHMP1A-205ENST00000548650 QRSL1Q9H0R6 528 aaKnown RBP15.45■□□□□ 0.06
CHMP1A-205ENST00000548650 AKTIPQ9H8T0 292 aa15.45■□□□□ 0.06
CHMP1A-205ENST00000548650 HIVEP2P31629 2446 aa15.45■□□□□ 0.06
CHMP1A-205ENST00000548650 DUXAA6NLW8 204 aa15.44■□□□□ 0.06
CHMP1A-205ENST00000548650 ZNF814B7Z6K7 855 aa15.44■□□□□ 0.06
CHMP1A-205ENST00000548650 SMAD7O15105 426 aaKnown RBP15.44■□□□□ 0.06
CHMP1A-205ENST00000548650 TMCC2O75069 709 aa15.44■□□□□ 0.06
CHMP1A-205ENST00000548650 STX11O75558 287 aa15.44■□□□□ 0.06
CHMP1A-205ENST00000548650 YES1P07947 543 aa15.44■□□□□ 0.06
CHMP1A-205ENST00000548650 DHRS4L1P0CG22 281 aa15.44■□□□□ 0.06
CHMP1A-205ENST00000548650 IL32P24001 234 aa15.44■□□□□ 0.06
CHMP1A-205ENST00000548650 ABCE1P61221 599 aaKnown RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms