RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 ZNF141Q15928 474 aa11.88□□□□□ -0.51
CPSF6-204ENST00000547486 MAPK14Q16539 360 aa11.88□□□□□ -0.51
CPSF6-204ENST00000547486 ARHGAP11BQ3KRB8 267 aa11.88□□□□□ -0.51
CPSF6-204ENST00000547486 TNFAIP8L3Q5GJ75 292 aa11.88□□□□□ -0.51
CPSF6-204ENST00000547486 SLC25A53Q5H9E4 307 aa11.88□□□□□ -0.51
CPSF6-204ENST00000547486 Q5PR19 223 aa11.88□□□□□ -0.51
CPSF6-204ENST00000547486 BHLHB9Q6PI77 547 aa11.88□□□□□ -0.51
CPSF6-204ENST00000547486 FCRLAQ7L513 359 aa11.88□□□□□ -0.51
CPSF6-204ENST00000547486 BIVMQ86UB2 503 aa11.88□□□□□ -0.51
CPSF6-204ENST00000547486 ANKRD46Q86W74 232 aa11.88□□□□□ -0.51
CPSF6-204ENST00000547486 P3H2Q8IVL5 708 aa11.88□□□□□ -0.51
CPSF6-204ENST00000547486 GABRG1Q8N1C3 465 aa11.88□□□□□ -0.51
CPSF6-204ENST00000547486 OR8J2Q8NGG1 315 aa11.88□□□□□ -0.51
CPSF6-204ENST00000547486 OR4A15Q8NGL6 344 aa11.88□□□□□ -0.51
CPSF6-204ENST00000547486 IGFBPL1Q8WX77 278 aa11.88□□□□□ -0.51
CPSF6-204ENST00000547486 CPNE4Q96A23 557 aaPredicted RBP11.88□□□□□ -0.51
CPSF6-204ENST00000547486 MRGPRX4Q96LA9 322 aa11.88□□□□□ -0.51
CPSF6-204ENST00000547486 ZIM3Q96PE6 472 aa11.88□□□□□ -0.51
CPSF6-204ENST00000547486 THUMPD3Q9BV44 507 aaKnown RBP11.88□□□□□ -0.51
CPSF6-204ENST00000547486 ACTR6Q9GZN1 396 aa11.88□□□□□ -0.51
CPSF6-204ENST00000547486 NMUR2Q9GZQ4 415 aa11.88□□□□□ -0.51
CPSF6-204ENST00000547486 OR51I1Q9H343 314 aa11.88□□□□□ -0.51
CPSF6-204ENST00000547486 SSU72Q9NP77 194 aaKnown RBP11.88□□□□□ -0.51
CPSF6-204ENST00000547486 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.88□□□□□ -0.51
CPSF6-204ENST00000547486 GPR52Q9Y2T5 361 aa11.88□□□□□ -0.51
CPSF6-204ENST00000547486 RAP2CQ9Y3L5 183 aa11.88□□□□□ -0.51
CPSF6-204ENST00000547486 FLNAP21333 2647 aaKnown RBP11.87□□□□□ -0.51
CPSF6-204ENST00000547486 RNF103-CHMP3A0A140T963 221 aa11.87□□□□□ -0.51
CPSF6-204ENST00000547486 DUXAA6NLW8 204 aa11.87□□□□□ -0.51
CPSF6-204ENST00000547486 ZNF814B7Z6K7 855 aa11.87□□□□□ -0.51
CPSF6-204ENST00000547486 ARHGEF9O43307 516 aa11.87□□□□□ -0.51
CPSF6-204ENST00000547486 BCAS1O75363 584 aaPredicted RBP11.87□□□□□ -0.51
CPSF6-204ENST00000547486 STX11O75558 287 aa11.87□□□□□ -0.51
CPSF6-204ENST00000547486 PRKD3O94806 890 aa11.87□□□□□ -0.51
CPSF6-204ENST00000547486 CPSF4O95639 269 aaKnown RBP11.87□□□□□ -0.51
CPSF6-204ENST00000547486 YES1P07947 543 aa11.87□□□□□ -0.51
CPSF6-204ENST00000547486 MYZAPP0CAP1 466 aa11.87□□□□□ -0.51
CPSF6-204ENST00000547486 PABPC4LP0CB38 370 aaKnown RBP11.87□□□□□ -0.51
CPSF6-204ENST00000547486 UBL4AP11441 157 aa11.87□□□□□ -0.51
CPSF6-204ENST00000547486 BGNP21810 368 aa11.87□□□□□ -0.51
CPSF6-204ENST00000547486 SLC1A6P48664 564 aa11.87□□□□□ -0.51
CPSF6-204ENST00000547486 SKP2Q13309 424 aa11.87□□□□□ -0.51
CPSF6-204ENST00000547486 RNPS1Q15287 305 aaKnown RBP11.87□□□□□ -0.51
CPSF6-204ENST00000547486 BEX5Q5H9J7 111 aa11.87□□□□□ -0.51
CPSF6-204ENST00000547486 TMEM201Q5SNT2 666 aa11.87□□□□□ -0.51
CPSF6-204ENST00000547486 HEPHL1Q6MZM0 1159 aa11.87□□□□□ -0.51
CPSF6-204ENST00000547486 ALKBH2Q6NS38 261 aa11.87□□□□□ -0.51
CPSF6-204ENST00000547486 TFAP2EQ6VUC0 442 aa11.87□□□□□ -0.51
CPSF6-204ENST00000547486 ZNF704Q6ZNC4 412 aaPredicted RBP11.87□□□□□ -0.51
CPSF6-204ENST00000547486 C20orf204Q6ZNR8 217 aa11.87□□□□□ -0.51
CPSF6-204ENST00000547486 STK32CQ86UX6 486 aa11.87□□□□□ -0.51
CPSF6-204ENST00000547486 LSRQ86X29 649 aaPredicted RBP11.87□□□□□ -0.51
CPSF6-204ENST00000547486 WFDC8Q8IUA0 241 aa11.87□□□□□ -0.51
CPSF6-204ENST00000547486 TMCO5AQ8N6Q1 288 aa11.87□□□□□ -0.51
CPSF6-204ENST00000547486 TOR1AIP2Q8NFQ8 470 aa11.87□□□□□ -0.51
CPSF6-204ENST00000547486 MIPOL1Q8TD10 442 aa11.87□□□□□ -0.51
CPSF6-204ENST00000547486 ZFP90Q8TF47 636 aa11.87□□□□□ -0.51
CPSF6-204ENST00000547486 RAB8BQ92930 207 aa11.87□□□□□ -0.51
CPSF6-204ENST00000547486 S100PBPQ96BU1 408 aa11.87□□□□□ -0.51
CPSF6-204ENST00000547486 ZG16BQ96DA0 208 aa11.87□□□□□ -0.51
CPSF6-204ENST00000547486 PERPQ96FX8 193 aa11.87□□□□□ -0.51
CPSF6-204ENST00000547486 PLPPR2Q96GM1 343 aa11.87□□□□□ -0.51
CPSF6-204ENST00000547486 REXO5Q96IC2 774 aaKnown RBP11.87□□□□□ -0.51
CPSF6-204ENST00000547486 TEX37Q96LM6 180 aa11.87□□□□□ -0.51
CPSF6-204ENST00000547486 TMEM204Q9BSN7 226 aa11.87□□□□□ -0.51
CPSF6-204ENST00000547486 NUF2Q9BZD4 464 aa11.87□□□□□ -0.51
CPSF6-204ENST00000547486 DPY30Q9C005 99 aa11.87□□□□□ -0.51
CPSF6-204ENST00000547486 LAT2Q9GZY6 243 aa11.87□□□□□ -0.51
CPSF6-204ENST00000547486 QRSL1Q9H0R6 528 aaKnown RBP11.87□□□□□ -0.51
CPSF6-204ENST00000547486 TIGARQ9NQ88 270 aa11.87□□□□□ -0.51
CPSF6-204ENST00000547486 PNPOQ9NVS9 261 aa11.87□□□□□ -0.51
CPSF6-204ENST00000547486 KLHL13Q9P2N7 655 aa11.87□□□□□ -0.51
CPSF6-204ENST00000547486 NUP214P35658 2090 aaPredicted RBP11.87□□□□□ -0.51
CPSF6-204ENST00000547486 PRSS51A0A1B0GVH4 220 aa11.86□□□□□ -0.51
CPSF6-204ENST00000547486 PRAMEF27A3QJZ7 478 aa11.86□□□□□ -0.51
CPSF6-204ENST00000547486 GJE1A6NN92 205 aa11.86□□□□□ -0.51
CPSF6-204ENST00000547486 C9JVG2 144 aa11.86□□□□□ -0.51
CPSF6-204ENST00000547486 CYP7B1O75881 506 aa11.86□□□□□ -0.51
CPSF6-204ENST00000547486 H6PDO95479 791 aa11.86□□□□□ -0.51
CPSF6-204ENST00000547486 ADAP00813 363 aa11.86□□□□□ -0.51
CPSF6-204ENST00000547486 OR12D1P0DN82 309 aa11.86□□□□□ -0.51
CPSF6-204ENST00000547486 EDNRAP25101 427 aa11.86□□□□□ -0.51
CPSF6-204ENST00000547486 ADSLP30566 484 aaPredicted RBP11.86□□□□□ -0.51
CPSF6-204ENST00000547486 CCR4P51679 360 aa11.86□□□□□ -0.51
CPSF6-204ENST00000547486 SESN3P58005 492 aa11.86□□□□□ -0.51
CPSF6-204ENST00000547486 RAC3P60763 192 aa11.86□□□□□ -0.51
CPSF6-204ENST00000547486 LTBQ06643 244 aa11.86□□□□□ -0.51
CPSF6-204ENST00000547486 FUT5Q11128 374 aa11.86□□□□□ -0.51
CPSF6-204ENST00000547486 CBFBQ13951 182 aa11.86□□□□□ -0.51
CPSF6-204ENST00000547486 TIGD2Q4W5G0 525 aa11.86□□□□□ -0.51
CPSF6-204ENST00000547486 SFRP5Q5T4F7 317 aa11.86□□□□□ -0.51
CPSF6-204ENST00000547486 AP1ARQ63HQ0 302 aa11.86□□□□□ -0.51
CPSF6-204ENST00000547486 TYW3Q6IPR3 259 aaKnown RBP11.86□□□□□ -0.51
CPSF6-204ENST00000547486 PLEKHM3Q6ZWE6 761 aa11.86□□□□□ -0.51
CPSF6-204ENST00000547486 YTHDF3Q7Z739 585 aaKnown RBP11.86□□□□□ -0.51
CPSF6-204ENST00000547486 HMGN2P46Q86SG4 172 aa11.86□□□□□ -0.51
CPSF6-204ENST00000547486 LILRB1Q8NHL6 650 aaPredicted RBP11.86□□□□□ -0.51
CPSF6-204ENST00000547486 RAB3IL1Q8TBN0 382 aa11.86□□□□□ -0.51
CPSF6-204ENST00000547486 XAGE5Q8WWM1 108 aa11.86□□□□□ -0.51
CPSF6-204ENST00000547486 ZNF75CPQ92670 426 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms