RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 FCRLAQ7L513 359 aa13.63□□□□□ -0.23
HOXC11-202ENST00000546378 FAM26EQ8N5C1 309 aa13.63□□□□□ -0.23
HOXC11-202ENST00000546378 MSLNLQ96KJ4 702 aa13.63□□□□□ -0.23
HOXC11-202ENST00000546378 KXD1Q9BQD3 176 aa13.63□□□□□ -0.23
HOXC11-202ENST00000546378 BTBD1Q9H0C5 482 aa13.63□□□□□ -0.23
HOXC11-202ENST00000546378 NEUROD4Q9HD90 331 aa13.63□□□□□ -0.23
HOXC11-202ENST00000546378 ZSCAN32Q9NX65 697 aa13.63□□□□□ -0.23
HOXC11-202ENST00000546378 MAFFQ9ULX9 164 aa13.63□□□□□ -0.23
HOXC11-202ENST00000546378 C4orf51C9J302 202 aa13.62□□□□□ -0.23
HOXC11-202ENST00000546378 PRRT4C9JH25 899 aa13.62□□□□□ -0.23
HOXC11-202ENST00000546378 BLOC1S5-TXNDC5H3BN57 136 aa13.62□□□□□ -0.23
HOXC11-202ENST00000546378 PRKACAP17612 351 aa13.62□□□□□ -0.23
HOXC11-202ENST00000546378 NDUFV2P19404 249 aa13.62□□□□□ -0.23
HOXC11-202ENST00000546378 AK4P27144 223 aaPredicted RBP13.62□□□□□ -0.23
HOXC11-202ENST00000546378 BSGP35613 385 aa13.62□□□□□ -0.23
HOXC11-202ENST00000546378 PGDP52209 483 aa13.62□□□□□ -0.23
HOXC11-202ENST00000546378 DEFB110Q30KQ9 67 aa13.62□□□□□ -0.23
HOXC11-202ENST00000546378 TRMT12Q53H54 448 aaKnown RBP13.62□□□□□ -0.23
HOXC11-202ENST00000546378 FAAH2Q6GMR7 532 aa13.62□□□□□ -0.23
HOXC11-202ENST00000546378 LIN54Q6MZP7 749 aa13.62□□□□□ -0.23
HOXC11-202ENST00000546378 APOOLQ6UXV4 268 aa13.62□□□□□ -0.23
HOXC11-202ENST00000546378 SLC44A3Q8N4M1 653 aa13.62□□□□□ -0.23
HOXC11-202ENST00000546378 SPERTQ8NA61 448 aa13.62□□□□□ -0.23
HOXC11-202ENST00000546378 HAVCR2Q8TDQ0 301 aa13.62□□□□□ -0.23
HOXC11-202ENST00000546378 C3orf49Q96BT1 292 aa13.62□□□□□ -0.23
HOXC11-202ENST00000546378 TBC1D20Q96BZ9 403 aa13.62□□□□□ -0.23
HOXC11-202ENST00000546378 LMLNQ96KR4 655 aa13.62□□□□□ -0.23
HOXC11-202ENST00000546378 LINC00052Q96N35 136 aa13.62□□□□□ -0.23
HOXC11-202ENST00000546378 ERMAPQ96PL5 475 aaPredicted RBP13.62□□□□□ -0.23
HOXC11-202ENST00000546378 STOML2Q9UJZ1 356 aa13.62□□□□□ -0.23
HOXC11-202ENST00000546378 HS3ST2Q9Y278 367 aa13.62□□□□□ -0.23
HOXC11-202ENST00000546378 OTOL1A6NHN0 477 aaPredicted RBP13.62□□□□□ -0.23
HOXC11-202ENST00000546378 RGS9O75916 674 aaPredicted RBP13.62□□□□□ -0.23
HOXC11-202ENST00000546378 MPC2O95563 127 aa13.62□□□□□ -0.23
HOXC11-202ENST00000546378 HK1P19367 917 aa13.62□□□□□ -0.23
HOXC11-202ENST00000546378 HSD3B2P26439 372 aa13.62□□□□□ -0.23
HOXC11-202ENST00000546378 IFNGR2P38484 337 aa13.62□□□□□ -0.23
HOXC11-202ENST00000546378 LGALSLQ3ZCW2 172 aaPredicted RBP13.62□□□□□ -0.23
HOXC11-202ENST00000546378 GLRX5Q86SX6 157 aa13.62□□□□□ -0.23
HOXC11-202ENST00000546378 FBXL6Q8N531 539 aa13.62□□□□□ -0.23
HOXC11-202ENST00000546378 OR4C6Q8NH72 309 aa13.62□□□□□ -0.23
HOXC11-202ENST00000546378 HSD17B8Q92506 261 aa13.62□□□□□ -0.23
HOXC11-202ENST00000546378 PEX11GQ96HA9 241 aa13.62□□□□□ -0.23
HOXC11-202ENST00000546378 NDC1Q9BTX1 674 aa13.62□□□□□ -0.23
HOXC11-202ENST00000546378 TSPAN10Q9H1Z9 355 aaPredicted RBP13.62□□□□□ -0.23
HOXC11-202ENST00000546378 MRPS30Q9NP92 439 aaKnown RBP13.62□□□□□ -0.23
HOXC11-202ENST00000546378 TRIM36Q9NQ86 728 aa13.62□□□□□ -0.23
HOXC11-202ENST00000546378 BABAM2Q9NXR7 383 aa13.62□□□□□ -0.23
HOXC11-202ENST00000546378 KCNN3Q9UGI6 736 aa13.62□□□□□ -0.23
HOXC11-202ENST00000546378 RABL2BQ9UNT1 228 aa13.62□□□□□ -0.23
HOXC11-202ENST00000546378 TRBV2A0A0J9YWF9 115 aa13.61□□□□□ -0.23
HOXC11-202ENST00000546378 SLC16A5O15375 505 aa13.61□□□□□ -0.23
HOXC11-202ENST00000546378 HNRNPA1P09651 372 aaKnown RBP eCLIP13.61□□□□□ -0.23
HOXC11-202ENST00000546378 HOXB6P17509 224 aaKnown RBP13.61□□□□□ -0.23
HOXC11-202ENST00000546378 RAB3BP20337 219 aa13.61□□□□□ -0.23
HOXC11-202ENST00000546378 LIMS1P48059 325 aa13.61□□□□□ -0.23
HOXC11-202ENST00000546378 KHKP50053 298 aa13.61□□□□□ -0.23
HOXC11-202ENST00000546378 PGGHGQ32M88 737 aa13.61□□□□□ -0.23
HOXC11-202ENST00000546378 C2orf27AQ580R0 203 aa13.61□□□□□ -0.23
HOXC11-202ENST00000546378 OR5M10Q6IEU7 315 aa13.61□□□□□ -0.23
HOXC11-202ENST00000546378 GDPGP1Q6ZNW5 385 aa13.61□□□□□ -0.23
HOXC11-202ENST00000546378 GDF7Q7Z4P5 450 aa13.61□□□□□ -0.23
HOXC11-202ENST00000546378 CPXM2Q8N436 756 aa13.61□□□□□ -0.23
HOXC11-202ENST00000546378 ARRDC3Q96B67 414 aa13.61□□□□□ -0.23
HOXC11-202ENST00000546378 PRRC1Q96M27 445 aa13.61□□□□□ -0.23
HOXC11-202ENST00000546378 CD180Q99467 661 aa13.61□□□□□ -0.23
HOXC11-202ENST00000546378 FBXL2Q9UKC9 423 aa13.61□□□□□ -0.23
HOXC11-202ENST00000546378 EXOSC1Q9Y3B2 195 aaKnown RBP13.61□□□□□ -0.23
HOXC11-202ENST00000546378 OR10H1Q9Y4A9 318 aa13.61□□□□□ -0.23
HOXC11-202ENST00000546378 SNRNP200O75643 2136 aaKnown RBP13.61□□□□□ -0.23
HOXC11-202ENST00000546378 IGLV3-16A0A075B6K0 115 aa13.61□□□□□ -0.23
HOXC11-202ENST00000546378 UGDHO60701 494 aa13.61□□□□□ -0.23
HOXC11-202ENST00000546378 LATS1O95835 1130 aa13.61□□□□□ -0.23
HOXC11-202ENST00000546378 PRPH2P23942 346 aa13.61□□□□□ -0.23
HOXC11-202ENST00000546378 GDNFP39905 211 aa13.61□□□□□ -0.23
HOXC11-202ENST00000546378 HMGA2P52926 109 aa13.61□□□□□ -0.23
HOXC11-202ENST00000546378 ERVK-21P61565 698 aa13.61□□□□□ -0.23
HOXC11-202ENST00000546378 RGS1Q08116 209 aa13.61□□□□□ -0.23
HOXC11-202ENST00000546378 LGALS3BPQ08380 585 aa13.61□□□□□ -0.23
HOXC11-202ENST00000546378 MINDY4Q4G0A6 757 aa13.61□□□□□ -0.23
HOXC11-202ENST00000546378 TMEM255AQ5JRV8 349 aa13.61□□□□□ -0.23
HOXC11-202ENST00000546378 TCTE1Q5JU00 501 aa13.61□□□□□ -0.23
HOXC11-202ENST00000546378 TANGO2Q6ICL3 276 aa13.61□□□□□ -0.23
HOXC11-202ENST00000546378 YAF2Q8IY57 180 aa13.61□□□□□ -0.23
HOXC11-202ENST00000546378 PGBD3Q8N328 593 aa13.61□□□□□ -0.23
HOXC11-202ENST00000546378 SRFBP1Q8NEF9 429 aaKnown RBP13.61□□□□□ -0.23
HOXC11-202ENST00000546378 TNFAIP8L1Q8WVP5 186 aa13.61□□□□□ -0.23
HOXC11-202ENST00000546378 ASB12Q8WXK4 309 aa13.61□□□□□ -0.23
HOXC11-202ENST00000546378 TIFAQ96CG3 184 aa13.61□□□□□ -0.23
HOXC11-202ENST00000546378 SRA1Q9HD15 236 aaKnown RBP13.61□□□□□ -0.23
HOXC11-202ENST00000546378 UBQLN2Q9UHD9 624 aa13.61□□□□□ -0.23
HOXC11-202ENST00000546378 FKBP7Q9Y680 259 aa13.61□□□□□ -0.23
HOXC11-202ENST00000546378 TRANK1O15050 2925 aa13.61□□□□□ -0.23
HOXC11-202ENST00000546378 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.61□□□□□ -0.23
HOXC11-202ENST00000546378 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.61□□□□□ -0.23
HOXC11-202ENST00000546378 TVP23AA6NH52 213 aa13.61□□□□□ -0.23
HOXC11-202ENST00000546378 TBX6O95947 436 aaPredicted RBP13.61□□□□□ -0.23
HOXC11-202ENST00000546378 ADH5P11766 374 aa13.61□□□□□ -0.23
HOXC11-202ENST00000546378 ATF1P18846 271 aa13.61□□□□□ -0.23
HOXC11-202ENST00000546378 DCTDP32321 178 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms