RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 RPS26P62854 115 aaKnown RBP8.36□□□□□ -1.07
YBX3-218ENST00000546298 TXNL4AP83876 142 aaKnown RBP8.36□□□□□ -1.07
YBX3-218ENST00000546298 HPCAP84074 193 aa8.36□□□□□ -1.07
YBX3-218ENST00000546298 LRRC74AQ0VAA2 488 aa8.36□□□□□ -1.07
YBX3-218ENST00000546298 QPRTQ15274 297 aa8.36□□□□□ -1.07
YBX3-218ENST00000546298 TNFAIP8L3Q5GJ75 292 aa8.36□□□□□ -1.07
YBX3-218ENST00000546298 PDZK1Q5T2W1 519 aa8.36□□□□□ -1.07
YBX3-218ENST00000546298 HEPHL1Q6MZM0 1159 aa8.36□□□□□ -1.07
YBX3-218ENST00000546298 OGFOD2Q6N063 350 aa8.36□□□□□ -1.07
YBX3-218ENST00000546298 STAC2Q6ZMT1 411 aa8.36□□□□□ -1.07
YBX3-218ENST00000546298 FCRLAQ7L513 359 aa8.36□□□□□ -1.07
YBX3-218ENST00000546298 SPATA19Q7Z5L4 167 aa8.36□□□□□ -1.07
YBX3-218ENST00000546298 TRIML2Q8N7C3 387 aa8.36□□□□□ -1.07
YBX3-218ENST00000546298 RNF128Q8TEB7 428 aa8.36□□□□□ -1.07
YBX3-218ENST00000546298 ZFP90Q8TF47 636 aa8.36□□□□□ -1.07
YBX3-218ENST00000546298 XAGE5Q8WWM1 108 aa8.36□□□□□ -1.07
YBX3-218ENST00000546298 THUMPD3Q9BV44 507 aaKnown RBP8.36□□□□□ -1.07
YBX3-218ENST00000546298 NUF2Q9BZD4 464 aa8.36□□□□□ -1.07
YBX3-218ENST00000546298 ZNF350Q9GZX5 532 aa8.36□□□□□ -1.07
YBX3-218ENST00000546298 OR51I1Q9H343 314 aa8.36□□□□□ -1.07
YBX3-218ENST00000546298 MEAF6Q9HAF1 191 aa8.36□□□□□ -1.07
YBX3-218ENST00000546298 NGBQ9NPG2 151 aa8.36□□□□□ -1.07
YBX3-218ENST00000546298 KLHL13Q9P2N7 655 aa8.36□□□□□ -1.07
YBX3-218ENST00000546298 WDR45Q9Y484 360 aa8.36□□□□□ -1.07
YBX3-218ENST00000546298 TEP1Q99973 2627 aaKnown RBP8.36□□□□□ -1.07
YBX3-218ENST00000546298 C2CD3Q4AC94 2353 aa8.35□□□□□ -1.07
YBX3-218ENST00000546298 MPDZO75970 2070 aa8.35□□□□□ -1.07
YBX3-218ENST00000546298 E9PBE3 544 aa8.35□□□□□ -1.07
YBX3-218ENST00000546298 SLCO1B7G3V0H7 640 aa8.35□□□□□ -1.07
YBX3-218ENST00000546298 ETV2O00321 342 aaPredicted RBP8.35□□□□□ -1.07
YBX3-218ENST00000546298 ANKRD28O15084 1053 aa8.35□□□□□ -1.07
YBX3-218ENST00000546298 FCMRO60667 390 aa8.35□□□□□ -1.07
YBX3-218ENST00000546298 DNAJA2O60884 412 aa8.35□□□□□ -1.07
YBX3-218ENST00000546298 SCN2BO60939 215 aa8.35□□□□□ -1.07
YBX3-218ENST00000546298 TMCC2O75069 709 aa8.35□□□□□ -1.07
YBX3-218ENST00000546298 UGT2B17O75795 530 aa8.35□□□□□ -1.07
YBX3-218ENST00000546298 NTN1O95631 604 aa8.35□□□□□ -1.07
YBX3-218ENST00000546298 YES1P07947 543 aa8.35□□□□□ -1.07
YBX3-218ENST00000546298 OR12D1P0DN82 309 aa8.35□□□□□ -1.07
YBX3-218ENST00000546298 FKBP2P26885 142 aaKnown RBP8.35□□□□□ -1.07
YBX3-218ENST00000546298 SHC1P29353 583 aa8.35□□□□□ -1.07
YBX3-218ENST00000546298 KHKP50053 298 aa8.35□□□□□ -1.07
YBX3-218ENST00000546298 RNF144AP50876 292 aaPredicted RBP8.35□□□□□ -1.07
YBX3-218ENST00000546298 CSNK2A1P68400 391 aaPredicted RBP8.35□□□□□ -1.07
YBX3-218ENST00000546298 BST1Q10588 318 aa8.35□□□□□ -1.07
YBX3-218ENST00000546298 MPP2Q14168 576 aa8.35□□□□□ -1.07
YBX3-218ENST00000546298 CASP8Q14790 479 aa8.35□□□□□ -1.07
YBX3-218ENST00000546298 P2RY6Q15077 328 aa8.35□□□□□ -1.07
YBX3-218ENST00000546298 TOMM34Q15785 309 aaPredicted RBP8.35□□□□□ -1.07
YBX3-218ENST00000546298 NDUFAF6Q330K2 333 aa8.35□□□□□ -1.07
YBX3-218ENST00000546298 FAM174BQ3ZCQ3 159 aa8.35□□□□□ -1.07
YBX3-218ENST00000546298 TIGD2Q4W5G0 525 aa8.35□□□□□ -1.07
YBX3-218ENST00000546298 SPANXN4Q5MJ08 99 aa8.35□□□□□ -1.07
YBX3-218ENST00000546298 AP1ARQ63HQ0 302 aa8.35□□□□□ -1.07
YBX3-218ENST00000546298 SAXO2Q658L1 398 aa8.35□□□□□ -1.07
YBX3-218ENST00000546298 ATG16L1Q676U5 607 aa8.35□□□□□ -1.07
YBX3-218ENST00000546298 C3orf33Q6P1S2 294 aa8.35□□□□□ -1.07
YBX3-218ENST00000546298 TNFAIP8L2Q6P589 184 aaPredicted RBP8.35□□□□□ -1.07
YBX3-218ENST00000546298 BIVMQ86UB2 503 aa8.35□□□□□ -1.07
YBX3-218ENST00000546298 ANKRD46Q86W74 232 aa8.35□□□□□ -1.07
YBX3-218ENST00000546298 CXorf67Q86X51 503 aaPredicted RBP8.35□□□□□ -1.07
YBX3-218ENST00000546298 WFDC8Q8IUA0 241 aa8.35□□□□□ -1.07
YBX3-218ENST00000546298 TUSC5Q8IXB3 177 aa8.35□□□□□ -1.07
YBX3-218ENST00000546298 ANKRD42Q8N9B4 389 aa8.35□□□□□ -1.07
YBX3-218ENST00000546298 WFDC11Q8NEX6 87 aa8.35□□□□□ -1.07
YBX3-218ENST00000546298 ABHD3Q8WU67 409 aa8.35□□□□□ -1.07
YBX3-218ENST00000546298 SLC25A43Q8WUT9 341 aaPredicted RBP8.35□□□□□ -1.07
YBX3-218ENST00000546298 ROPN1LQ96C74 230 aa8.35□□□□□ -1.07
YBX3-218ENST00000546298 NEURL3Q96EH8 262 aa8.35□□□□□ -1.07
YBX3-218ENST00000546298 ZBTB18Q99592 522 aa8.35□□□□□ -1.07
YBX3-218ENST00000546298 CCL19Q99731 98 aa8.35□□□□□ -1.07
YBX3-218ENST00000546298 KLHDC3Q9BQ90 382 aa8.35□□□□□ -1.07
YBX3-218ENST00000546298 SRXN1Q9BYN0 137 aa8.35□□□□□ -1.07
YBX3-218ENST00000546298 ACTR6Q9GZN1 396 aa8.35□□□□□ -1.07
YBX3-218ENST00000546298 C20orf27Q9GZN8 174 aa8.35□□□□□ -1.07
YBX3-218ENST00000546298 SERHL2Q9H4I8 314 aa8.35□□□□□ -1.07
YBX3-218ENST00000546298 C12orf49Q9H741 205 aa8.35□□□□□ -1.07
YBX3-218ENST00000546298 UBTD1Q9HAC8 227 aa8.35□□□□□ -1.07
YBX3-218ENST00000546298 DLL4Q9NR61 685 aa8.35□□□□□ -1.07
YBX3-218ENST00000546298 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.35□□□□□ -1.07
YBX3-218ENST00000546298 ACER3Q9NUN7 267 aa8.35□□□□□ -1.07
YBX3-218ENST00000546298 PNPOQ9NVS9 261 aa8.35□□□□□ -1.07
YBX3-218ENST00000546298 THAP1Q9NVV9 213 aa8.35□□□□□ -1.07
YBX3-218ENST00000546298 KLHL9Q9P2J3 617 aa8.35□□□□□ -1.07
YBX3-218ENST00000546298 MARCOQ9UEW3 520 aaPredicted RBP8.35□□□□□ -1.07
YBX3-218ENST00000546298 BTNL2Q9UIR0 455 aa8.35□□□□□ -1.07
YBX3-218ENST00000546298 MKLN1Q9UL63 735 aa8.35□□□□□ -1.07
YBX3-218ENST00000546298 LIPT1Q9Y234 373 aa8.35□□□□□ -1.07
YBX3-218ENST00000546298 SLC35A3Q9Y2D2 325 aa8.35□□□□□ -1.07
YBX3-218ENST00000546298 SPIN1Q9Y657 262 aaPredicted RBP8.35□□□□□ -1.07
YBX3-218ENST00000546298 ARHGAP21Q5T5U3 1957 aa8.35□□□□□ -1.07
YBX3-218ENST00000546298 EXPH5Q8NEV8 1989 aa8.35□□□□□ -1.07
YBX3-218ENST00000546298 LRBAP50851 2863 aa8.35□□□□□ -1.07
YBX3-218ENST00000546298 DOCK7Q96N67 2140 aa8.35□□□□□ -1.07
YBX3-218ENST00000546298 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.34□□□□□ -1.07
YBX3-218ENST00000546298 FAM171A2A8MVW0 826 aa8.34□□□□□ -1.07
YBX3-218ENST00000546298 HDAC3O15379 428 aa8.34□□□□□ -1.07
YBX3-218ENST00000546298 SIAH2O43255 324 aa8.34□□□□□ -1.07
YBX3-218ENST00000546298 KLF4O43474 513 aa8.34□□□□□ -1.07
YBX3-218ENST00000546298 KIAA0513O60268 411 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms