RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 ZNF385DQ9H6B1 395 aa10.68□□□□□ -0.7
YBX3-217ENST00000546164 CCDC134Q9H6E4 229 aa10.68□□□□□ -0.7
YBX3-217ENST00000546164 MTHFD2LQ9H903 347 aaPredicted RBP10.68□□□□□ -0.7
YBX3-217ENST00000546164 SLC24A3Q9HC58 644 aa10.68□□□□□ -0.7
YBX3-217ENST00000546164 NPHS2Q9NP85 383 aa10.68□□□□□ -0.7
YBX3-217ENST00000546164 EXOSC3Q9NQT5 275 aaKnown RBP10.68□□□□□ -0.7
YBX3-217ENST00000546164 CCDC167Q9P0B6 97 aa10.68□□□□□ -0.7
YBX3-217ENST00000546164 P2RX2Q9UBL9 471 aa10.68□□□□□ -0.7
YBX3-217ENST00000546164 FOXD3Q9UJU5 478 aaPredicted RBP10.68□□□□□ -0.7
YBX3-217ENST00000546164 DCTN4Q9UJW0 460 aa10.68□□□□□ -0.7
YBX3-217ENST00000546164 TRIM33Q9UPN9 1127 aa10.68□□□□□ -0.7
YBX3-217ENST00000546164 PCDHB14Q9Y5E9 798 aa10.68□□□□□ -0.7
YBX3-217ENST00000546164 HCFC1P51610 2035 aa10.67□□□□□ -0.7
YBX3-217ENST00000546164 DSPPQ9NZW4 1301 aa10.67□□□□□ -0.7
YBX3-217ENST00000546164 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.67□□□□□ -0.7
YBX3-217ENST00000546164 A0A1W2PP18 115 aa10.67□□□□□ -0.7
YBX3-217ENST00000546164 TNFSF13O75888 250 aa10.67□□□□□ -0.7
YBX3-217ENST00000546164 NUDT14O95848 222 aa10.67□□□□□ -0.7
YBX3-217ENST00000546164 TFPTP0C1Z6 253 aa10.67□□□□□ -0.7
YBX3-217ENST00000546164 NR2F1P10589 423 aa10.67□□□□□ -0.7
YBX3-217ENST00000546164 FCGR2AP12318 317 aa10.67□□□□□ -0.7
YBX3-217ENST00000546164 CAPN3P20807 821 aa10.67□□□□□ -0.7
YBX3-217ENST00000546164 ME2P23368 584 aa10.67□□□□□ -0.7
YBX3-217ENST00000546164 DSTNP60981 165 aa10.67□□□□□ -0.7
YBX3-217ENST00000546164 PLAURQ03405 335 aa10.67□□□□□ -0.7
YBX3-217ENST00000546164 FADDQ13158 208 aa10.67□□□□□ -0.7
YBX3-217ENST00000546164 QPRTQ15274 297 aa10.67□□□□□ -0.7
YBX3-217ENST00000546164 TOMM34Q15785 309 aaPredicted RBP10.67□□□□□ -0.7
YBX3-217ENST00000546164 PLXDC2Q6UX71 529 aa10.67□□□□□ -0.7
YBX3-217ENST00000546164 OR2V1Q8NHB1 315 aa10.67□□□□□ -0.7
YBX3-217ENST00000546164 FBXO27Q8NI29 283 aa10.67□□□□□ -0.7
YBX3-217ENST00000546164 ST8SIA1Q92185 356 aa10.67□□□□□ -0.7
YBX3-217ENST00000546164 SMPDL3BQ92485 455 aa10.67□□□□□ -0.7
YBX3-217ENST00000546164 RNASE6Q93091 150 aaKnown RBP10.67□□□□□ -0.7
YBX3-217ENST00000546164 ZNF524Q96C55 264 aa10.67□□□□□ -0.7
YBX3-217ENST00000546164 INTS12Q96CB8 462 aaKnown RBP10.67□□□□□ -0.7
YBX3-217ENST00000546164 LRRC46Q96FV0 321 aa10.67□□□□□ -0.7
YBX3-217ENST00000546164 AURKBQ96GD4 344 aaPredicted RBP10.67□□□□□ -0.7
YBX3-217ENST00000546164 ZNF845Q96IR2 970 aaPredicted RBP10.67□□□□□ -0.7
YBX3-217ENST00000546164 KLHL15Q96M94 604 aa10.67□□□□□ -0.7
YBX3-217ENST00000546164 PINK1Q9BXM7 581 aa10.67□□□□□ -0.7
YBX3-217ENST00000546164 RAD21L1Q9H4I0 556 aa10.67□□□□□ -0.7
YBX3-217ENST00000546164 RNF122Q9H9V4 155 aa10.67□□□□□ -0.7
YBX3-217ENST00000546164 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.67□□□□□ -0.7
YBX3-217ENST00000546164 SLC25A37Q9NYZ2 338 aa10.67□□□□□ -0.7
YBX3-217ENST00000546164 CALML5Q9NZT1 146 aa10.67□□□□□ -0.7
YBX3-217ENST00000546164 CREBBPQ92793 2442 aa10.66□□□□□ -0.7
YBX3-217ENST00000546164 POLQO75417 2590 aa10.66□□□□□ -0.7
YBX3-217ENST00000546164 CSMD1Q96PZ7 3565 aa10.66□□□□□ -0.7
YBX3-217ENST00000546164 TRBV5-3A0A0A0MS03 114 aa10.66□□□□□ -0.7
YBX3-217ENST00000546164 A0A0G2JND7 137 aa10.66□□□□□ -0.7
YBX3-217ENST00000546164 A0A0J9YW62 118 aa10.66□□□□□ -0.7
YBX3-217ENST00000546164 A0A1W2PNV4 684 aa10.66□□□□□ -0.7
YBX3-217ENST00000546164 GJE1A6NN92 205 aa10.66□□□□□ -0.7
YBX3-217ENST00000546164 CLIC1O00299 241 aa10.66□□□□□ -0.7
YBX3-217ENST00000546164 NR5A2O00482 541 aa10.66□□□□□ -0.7
YBX3-217ENST00000546164 EIF1AYO14602 144 aaKnown RBP10.66□□□□□ -0.7
YBX3-217ENST00000546164 EFNA2O43921 213 aa10.66□□□□□ -0.7
YBX3-217ENST00000546164 BCAS1O75363 584 aaPredicted RBP10.66□□□□□ -0.7
YBX3-217ENST00000546164 SNRPB2P08579 225 aaKnown RBP10.66□□□□□ -0.7
YBX3-217ENST00000546164 UBTFL6P0CB48 400 aaPredicted RBP10.66□□□□□ -0.7
YBX3-217ENST00000546164 ETFAP13804 333 aa10.66□□□□□ -0.7
YBX3-217ENST00000546164 NID1P14543 1247 aa10.66□□□□□ -0.7
YBX3-217ENST00000546164 PGCP20142 388 aa10.66□□□□□ -0.7
YBX3-217ENST00000546164 IL11P20809 199 aa10.66□□□□□ -0.7
YBX3-217ENST00000546164 SSTR2P30874 369 aa10.66□□□□□ -0.7
YBX3-217ENST00000546164 CRATP43155 626 aa10.66□□□□□ -0.7
YBX3-217ENST00000546164 EIF1AXP47813 144 aaKnown RBP10.66□□□□□ -0.7
YBX3-217ENST00000546164 PCYT1AP49585 367 aa10.66□□□□□ -0.7
YBX3-217ENST00000546164 CCR4P51679 360 aa10.66□□□□□ -0.7
YBX3-217ENST00000546164 CRISP3P54108 245 aa10.66□□□□□ -0.7
YBX3-217ENST00000546164 KCNJ10P78508 379 aa10.66□□□□□ -0.7
YBX3-217ENST00000546164 GNA13Q14344 377 aa10.66□□□□□ -0.7
YBX3-217ENST00000546164 PON3Q15166 354 aa10.66□□□□□ -0.7
YBX3-217ENST00000546164 GUSBP1Q15486 140 aa10.66□□□□□ -0.7
YBX3-217ENST00000546164 RGNQ15493 299 aa10.66□□□□□ -0.7
YBX3-217ENST00000546164 AGKQ53H12 422 aa10.66□□□□□ -0.7
YBX3-217ENST00000546164 PAGE3Q5JUK9 113 aa10.66□□□□□ -0.7
YBX3-217ENST00000546164 PRAMEF8Q5VWM4 474 aa10.66□□□□□ -0.7
YBX3-217ENST00000546164 PRAMEF7Q5VXH5 474 aa10.66□□□□□ -0.7
YBX3-217ENST00000546164 P4HA3Q7Z4N8 544 aa10.66□□□□□ -0.7
YBX3-217ENST00000546164 MSRB3Q8IXL7 192 aa10.66□□□□□ -0.7
YBX3-217ENST00000546164 GCNT2Q8N0V5 402 aa10.66□□□□□ -0.7
YBX3-217ENST00000546164 LILRA2Q8N149 483 aa10.66□□□□□ -0.7
YBX3-217ENST00000546164 TMCO5AQ8N6Q1 288 aa10.66□□□□□ -0.7
YBX3-217ENST00000546164 OR10D3Q8NH80 312 aa10.66□□□□□ -0.7
YBX3-217ENST00000546164 FNDC9Q8TBE3 224 aa10.66□□□□□ -0.7
YBX3-217ENST00000546164 TSPEARQ8WU66 669 aa10.66□□□□□ -0.7
YBX3-217ENST00000546164 SLC38A5Q8WUX1 472 aa10.66□□□□□ -0.7
YBX3-217ENST00000546164 THOC1Q96FV9 657 aaKnown RBP10.66□□□□□ -0.7
YBX3-217ENST00000546164 THUMPD3Q9BV44 507 aaKnown RBP10.66□□□□□ -0.7
YBX3-217ENST00000546164 QRSL1Q9H0R6 528 aaKnown RBP10.66□□□□□ -0.7
YBX3-217ENST00000546164 PIGMQ9H3S5 423 aa10.66□□□□□ -0.7
YBX3-217ENST00000546164 MRGBPQ9NV56 204 aa10.66□□□□□ -0.7
YBX3-217ENST00000546164 SLAMF8Q9P0V8 285 aa10.66□□□□□ -0.7
YBX3-217ENST00000546164 KCNN3Q9UGI6 736 aa10.66□□□□□ -0.7
YBX3-217ENST00000546164 PRDM4Q9UKN5 801 aa10.66□□□□□ -0.7
YBX3-217ENST00000546164 PACSIN3Q9UKS6 424 aa10.66□□□□□ -0.7
YBX3-217ENST00000546164 MED12LQ86YW9 2145 aa10.66□□□□□ -0.7
YBX3-217ENST00000546164 HEATR5AQ86XA9 2040 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms