RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 CNRIP1Q96F85 164 aaPredicted RBP13.19□□□□□ -0.3
SRP54-202ENST00000546080 CD180Q99467 661 aa13.19□□□□□ -0.3
SRP54-202ENST00000546080 SEC22CQ9BRL7 303 aa13.19□□□□□ -0.3
SRP54-202ENST00000546080 SARGQ9BW04 601 aa13.19□□□□□ -0.3
SRP54-202ENST00000546080 GLS2Q9UI32 602 aa13.19□□□□□ -0.3
SRP54-202ENST00000546080 BAIAP2Q9UQB8 552 aa13.19□□□□□ -0.3
SRP54-202ENST00000546080 CCL26Q9Y258 94 aa13.19□□□□□ -0.3
SRP54-202ENST00000546080 KPNA3O00505 521 aaPredicted RBP13.18□□□□□ -0.3
SRP54-202ENST00000546080 BHLHE40O14503 412 aa13.18□□□□□ -0.3
SRP54-202ENST00000546080 LCMT2O60294 686 aaKnown RBP13.18□□□□□ -0.3
SRP54-202ENST00000546080 ECDO95905 644 aaPredicted RBP13.18□□□□□ -0.3
SRP54-202ENST00000546080 GIPP09681 153 aaPredicted RBP13.18□□□□□ -0.3
SRP54-202ENST00000546080 FUT1P19526 365 aa13.18□□□□□ -0.3
SRP54-202ENST00000546080 PYCR1P32322 319 aa13.18□□□□□ -0.3
SRP54-202ENST00000546080 ZNF85Q03923 595 aa13.18□□□□□ -0.3
SRP54-202ENST00000546080 ARHGAP19Q14CB8 494 aa13.18□□□□□ -0.3
SRP54-202ENST00000546080 ZMYND11Q15326 602 aa13.18□□□□□ -0.3
SRP54-202ENST00000546080 UBE2NLQ5JXB2 153 aa13.18□□□□□ -0.3
SRP54-202ENST00000546080 MEIOBQ8N635 442 aa13.18□□□□□ -0.3
SRP54-202ENST00000546080 OR52H1Q8NGJ2 320 aa13.18□□□□□ -0.3
SRP54-202ENST00000546080 OR5J2Q8NH18 312 aa13.18□□□□□ -0.3
SRP54-202ENST00000546080 COQ8AQ8NI60 647 aa13.18□□□□□ -0.3
SRP54-202ENST00000546080 LGALS14Q8TCE9 139 aa13.18□□□□□ -0.3
SRP54-202ENST00000546080 MRGPRX3Q96LB0 322 aa13.18□□□□□ -0.3
SRP54-202ENST00000546080 TEAD3Q99594 435 aa13.18□□□□□ -0.3
SRP54-202ENST00000546080 PITHD1Q9GZP4 211 aaPredicted RBP13.18□□□□□ -0.3
SRP54-202ENST00000546080 MS4A7Q9GZW8 240 aaPredicted RBP13.18□□□□□ -0.3
SRP54-202ENST00000546080 PCBD2Q9H0N5 130 aa13.18□□□□□ -0.3
SRP54-202ENST00000546080 CACYBPQ9HB71 228 aaKnown RBP13.18□□□□□ -0.3
SRP54-202ENST00000546080 NANSQ9NR45 359 aa13.18□□□□□ -0.3
SRP54-202ENST00000546080 ZNF69Q9UC07 566 aa13.18□□□□□ -0.3
SRP54-202ENST00000546080 ACSL5Q9ULC5 683 aa13.18□□□□□ -0.3
SRP54-202ENST00000546080 IRAK3Q9Y616 596 aa13.18□□□□□ -0.3
SRP54-202ENST00000546080 SLC22A23A1A5C7 686 aa13.18□□□□□ -0.3
SRP54-202ENST00000546080 ANTXRLA6NF34 631 aa13.18□□□□□ -0.3
SRP54-202ENST00000546080 NAP1L6A6NFF2 107 aa13.18□□□□□ -0.3
SRP54-202ENST00000546080 ARL6IP5O75915 188 aa13.18□□□□□ -0.3
SRP54-202ENST00000546080 SNAPC5O75971 98 aa13.18□□□□□ -0.3
SRP54-202ENST00000546080 TPPPO94811 219 aa13.18□□□□□ -0.3
SRP54-202ENST00000546080 PAPLNO95428 1278 aa13.18□□□□□ -0.3
SRP54-202ENST00000546080 STATHP02808 62 aa13.18□□□□□ -0.3
SRP54-202ENST00000546080 NMBP08949 121 aa13.18□□□□□ -0.3
SRP54-202ENST00000546080 CLTBP09497 229 aa13.18□□□□□ -0.3
SRP54-202ENST00000546080 SBK2P0C263 348 aa13.18□□□□□ -0.3
SRP54-202ENST00000546080 NFYAP23511 347 aaPredicted RBP13.18□□□□□ -0.3
SRP54-202ENST00000546080 MC3RP41968 323 aa13.18□□□□□ -0.3
SRP54-202ENST00000546080 TPMTP51580 245 aa13.18□□□□□ -0.3
SRP54-202ENST00000546080 PDX1P52945 283 aa13.18□□□□□ -0.3
SRP54-202ENST00000546080 ARFIP1P53367 373 aa13.18□□□□□ -0.3
SRP54-202ENST00000546080 AP3S2P59780 193 aa13.18□□□□□ -0.3
SRP54-202ENST00000546080 PSMA6P60900 246 aaKnown RBP13.18□□□□□ -0.3
SRP54-202ENST00000546080 HTR4Q13639 388 aa13.18□□□□□ -0.3
SRP54-202ENST00000546080 LSRQ86X29 649 aaPredicted RBP13.18□□□□□ -0.3
SRP54-202ENST00000546080 OR6V1Q8N148 313 aa13.18□□□□□ -0.3
SRP54-202ENST00000546080 SPICQ8N5J4 248 aa13.18□□□□□ -0.3
SRP54-202ENST00000546080 SMAP2Q8WU79 429 aaPredicted RBP13.18□□□□□ -0.3
SRP54-202ENST00000546080 ARMC5Q96C12 935 aa13.18□□□□□ -0.3
SRP54-202ENST00000546080 HS6ST2Q96MM7 605 aa13.18□□□□□ -0.3
SRP54-202ENST00000546080 SLC46A2Q9BY10 475 aa13.18□□□□□ -0.3
SRP54-202ENST00000546080 CA10Q9NS85 328 aa13.18□□□□□ -0.3
SRP54-202ENST00000546080 PIPOXQ9P0Z9 390 aa13.18□□□□□ -0.3
SRP54-202ENST00000546080 ING1Q9UK53 422 aaPredicted RBP13.18□□□□□ -0.3
SRP54-202ENST00000546080 RABL2BQ9UNT1 228 aa13.18□□□□□ -0.3
SRP54-202ENST00000546080 GPR34Q9UPC5 381 aa13.18□□□□□ -0.3
SRP54-202ENST00000546080 ZNF443Q9Y2A4 671 aaPredicted RBP13.18□□□□□ -0.3
SRP54-202ENST00000546080 MYOFQ9NZM1 2061 aa13.17□□□□□ -0.3
SRP54-202ENST00000546080 LRIT2A6NDA9 550 aa13.17□□□□□ -0.3
SRP54-202ENST00000546080 FCMRO60667 390 aa13.17□□□□□ -0.3
SRP54-202ENST00000546080 KHDRBS3O75525 346 aaKnown RBP13.17□□□□□ -0.3
SRP54-202ENST00000546080 CLEC3AO75596 197 aa13.17□□□□□ -0.3
SRP54-202ENST00000546080 ASGR2P07307 311 aa13.17□□□□□ -0.3
SRP54-202ENST00000546080 SYN1P17600 705 aa13.17□□□□□ -0.3
SRP54-202ENST00000546080 CSNK2A2P19784 350 aaPredicted RBP13.17□□□□□ -0.3
SRP54-202ENST00000546080 TEAD1P28347 426 aa13.17□□□□□ -0.3
SRP54-202ENST00000546080 RAD52P43351 418 aa13.17□□□□□ -0.3
SRP54-202ENST00000546080 CAPZA2P47755 286 aa13.17□□□□□ -0.3
SRP54-202ENST00000546080 FXYD6P3P58550 94 aa13.17□□□□□ -0.3
SRP54-202ENST00000546080 RAP2BP61225 183 aa13.17□□□□□ -0.3
SRP54-202ENST00000546080 TMEM255AQ5JRV8 349 aa13.17□□□□□ -0.3
SRP54-202ENST00000546080 TFAP2EQ6VUC0 442 aa13.17□□□□□ -0.3
SRP54-202ENST00000546080 GLDNQ6ZMI3 551 aaPredicted RBP13.17□□□□□ -0.3
SRP54-202ENST00000546080 OR5K2Q8NHB8 316 aa13.17□□□□□ -0.3
SRP54-202ENST00000546080 CXorf40AQ8TE69 158 aa13.17□□□□□ -0.3
SRP54-202ENST00000546080 SMPDL3BQ92485 455 aa13.17□□□□□ -0.3
SRP54-202ENST00000546080 PLEKHA1Q9HB21 404 aa13.17□□□□□ -0.3
SRP54-202ENST00000546080 ADGRL4Q9HBW9 690 aa13.17□□□□□ -0.3
SRP54-202ENST00000546080 CMC2Q9NRP2 79 aa13.17□□□□□ -0.3
SRP54-202ENST00000546080 SIDT1Q9NXL6 827 aaKnown RBP13.17□□□□□ -0.3
SRP54-202ENST00000546080 RABL2AQ9UBK7 228 aaPredicted RBP13.17□□□□□ -0.3
SRP54-202ENST00000546080 AK6Q9Y3D8 172 aaKnown RBP13.17□□□□□ -0.3
SRP54-202ENST00000546080 A0A1W2PR48 441 aa13.17□□□□□ -0.3
SRP54-202ENST00000546080 A0A1W2PS29 197 aa13.17□□□□□ -0.3
SRP54-202ENST00000546080 OR6C65A6NJZ3 312 aa13.17□□□□□ -0.3
SRP54-202ENST00000546080 POM121CA8CG34 1229 aa13.17□□□□□ -0.3
SRP54-202ENST00000546080 A8MXK9 166 aa13.17□□□□□ -0.3
SRP54-202ENST00000546080 MCRIP1C9JLW8 97 aa13.17□□□□□ -0.3
SRP54-202ENST00000546080 RP2O75695 350 aa13.17□□□□□ -0.3
SRP54-202ENST00000546080 B3GALNT1O75752 331 aa13.17□□□□□ -0.3
SRP54-202ENST00000546080 ZIC2O95409 532 aaPredicted RBP13.17□□□□□ -0.3
SRP54-202ENST00000546080 LRG1P02750 347 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms