RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	BIK	Q13323	160 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	GTF2H2	Q13888	395 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	EBP	Q15125	230 aa	Known RBP	5.85	□□□□□ -1.47
CIT-213	ENST00000543324	PFKFB4	Q16877	469 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	CCNJ	Q5T5M9	372 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	C18orf63	Q68DL7	685 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	HIST2H2AA3	Q6FI13	130 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	GTF2H2C	Q6P1K8	395 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	CYP2R1	Q6VVX0	501 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	RTL4	Q6ZR62	310 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	LARP4	Q71RC2	724 aa	Known RBP eCLIP	5.85	□□□□□ -1.47
CIT-213	ENST00000543324	VASH1	Q7L8A9	365 aa	Predicted RBP	5.85	□□□□□ -1.47
CIT-213	ENST00000543324	SLC22A9	Q8IVM8	553 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	FUNDC1	Q8IVP5	155 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	IQCF2	Q8IXL9	164 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	RIMKLA	Q8IXN7	391 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	PEX5L	Q8IYB4	626 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	RPRML	Q8N4K4	120 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	OR52B6	Q8NGF0	335 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	OR52N2	Q8NGI0	321 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	DYNC2LI1	Q8TCX1	351 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	PAQR8	Q8TEZ7	354 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	FBLIM1	Q8WUP2	373 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	RND1	Q92730	232 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	EXT2	Q93063	718 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	TP53INP1	Q96A56	240 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	RGMA	Q96B86	450 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	YIPF6	Q96EC8	236 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	SENP5	Q96HI0	755 aa	Predicted RBP	5.85	□□□□□ -1.47
CIT-213	ENST00000543324	SGCZ	Q96LD1	299 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	MTERF1	Q99551	399 aa	Known RBP	5.85	□□□□□ -1.47
CIT-213	ENST00000543324	BTBD2	Q9BX70	525 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	TTTY12	Q9BZ98	90 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	GSX2	Q9BZM3	304 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	NDEL1	Q9GZM8	345 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	ZNF703	Q9H7S9	590 aa	Predicted RBP	5.85	□□□□□ -1.47
CIT-213	ENST00000543324	SIAE	Q9HAT2	523 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	HPF1	Q9NWY4	346 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	PHF11	Q9UIL8	331 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	ZNF225	Q9UK10	706 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	POU2F3	Q9UKI9	436 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	FBXW2	Q9UKT8	454 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	TIMM22	Q9Y584	194 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	ANGPTL3	Q9Y5C1	460 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	PCDHA9	Q9Y5H5	950 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	FAM215A	Q9Y5M1	114 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	LIPG	Q9Y5X9	500 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	5.85	□□□□□ -1.47
CIT-213	ENST00000543324	CLCA3P	Q9Y6N3	262 aa		5.85	□□□□□ -1.47
CIT-213	ENST00000543324	MED12	Q93074	2177 aa		5.84	□□□□□ -1.47
CIT-213	ENST00000543324		A0A1W2PS29	197 aa		5.84	□□□□□ -1.47
CIT-213	ENST00000543324	OR14I1	A6ND48	311 aa		5.84	□□□□□ -1.47
CIT-213	ENST00000543324	WASHC1	A8K0Z3	465 aa		5.84	□□□□□ -1.47
CIT-213	ENST00000543324	ZNF99	A8MXY4	864 aa	Predicted RBP	5.84	□□□□□ -1.47
CIT-213	ENST00000543324	WWP2	O00308	870 aa		5.84	□□□□□ -1.47
CIT-213	ENST00000543324	SAP18	O00422	153 aa	Known RBP	5.84	□□□□□ -1.47
CIT-213	ENST00000543324	AQP7	O14520	342 aa		5.84	□□□□□ -1.47
CIT-213	ENST00000543324	TFEC	O14948	347 aa	Predicted RBP	5.84	□□□□□ -1.47
CIT-213	ENST00000543324	SUSD5	O60279	629 aa		5.84	□□□□□ -1.47
CIT-213	ENST00000543324	UPK1B	O75841	260 aa		5.84	□□□□□ -1.47
CIT-213	ENST00000543324	GPR75	O95800	540 aa		5.84	□□□□□ -1.47
CIT-213	ENST00000543324	AIFM1	O95831	613 aa		5.84	□□□□□ -1.47
CIT-213	ENST00000543324	GSN	P06396	782 aa		5.84	□□□□□ -1.47
CIT-213	ENST00000543324	NR2F6	P10588	404 aa		5.84	□□□□□ -1.47
CIT-213	ENST00000543324	THRB	P10828	461 aa		5.84	□□□□□ -1.47
CIT-213	ENST00000543324	PCNA	P12004	261 aa		5.84	□□□□□ -1.47
CIT-213	ENST00000543324	BMP4	P12644	408 aa		5.84	□□□□□ -1.47
CIT-213	ENST00000543324	SRD5A1	P18405	259 aa		5.84	□□□□□ -1.47
CIT-213	ENST00000543324	S1PR1	P21453	382 aa		5.84	□□□□□ -1.47
CIT-213	ENST00000543324	CNR1	P21554	472 aa		5.84	□□□□□ -1.47
CIT-213	ENST00000543324	CPN2	P22792	545 aa		5.84	□□□□□ -1.47
CIT-213	ENST00000543324	TCEA1	P23193	301 aa	Known RBP	5.84	□□□□□ -1.47
CIT-213	ENST00000543324	SLC6A2	P23975	617 aa		5.84	□□□□□ -1.47
CIT-213	ENST00000543324	PTX3	P26022	381 aa	Predicted RBP	5.84	□□□□□ -1.47
CIT-213	ENST00000543324	PTGS2	P35354	604 aa		5.84	□□□□□ -1.47
CIT-213	ENST00000543324	UGT2B10	P36537	528 aa		5.84	□□□□□ -1.47
CIT-213	ENST00000543324	RFC3	P40938	356 aa		5.84	□□□□□ -1.47
CIT-213	ENST00000543324	CASP3	P42574	277 aa		5.84	□□□□□ -1.47
CIT-213	ENST00000543324	TRPC1	P48995	793 aa		5.84	□□□□□ -1.47
CIT-213	ENST00000543324	GPR85	P60893	370 aa		5.84	□□□□□ -1.47
CIT-213	ENST00000543324	RPS13	P62277	151 aa	Known RBP	5.84	□□□□□ -1.47
CIT-213	ENST00000543324	PLIN5	Q00G26	463 aa		5.84	□□□□□ -1.47
CIT-213	ENST00000543324	ID2	Q02363	134 aa		5.84	□□□□□ -1.47
CIT-213	ENST00000543324	FUT7	Q11130	342 aa		5.84	□□□□□ -1.47
CIT-213	ENST00000543324	FADD	Q13158	208 aa		5.84	□□□□□ -1.47
CIT-213	ENST00000543324	SLAMF1	Q13291	335 aa		5.84	□□□□□ -1.47
CIT-213	ENST00000543324	NTRK2	Q16620	822 aa		5.84	□□□□□ -1.47
CIT-213	ENST00000543324	AP5B1	Q2VPB7	878 aa		5.84	□□□□□ -1.47
CIT-213	ENST00000543324	FAM209A	Q5JX71	171 aa		5.84	□□□□□ -1.47
CIT-213	ENST00000543324	C6orf141	Q5SZD1	244 aa		5.84	□□□□□ -1.47
CIT-213	ENST00000543324	C6orf183	Q5T699	404 aa		5.84	□□□□□ -1.47
CIT-213	ENST00000543324	NDUFAF5	Q5TEU4	345 aa		5.84	□□□□□ -1.47
CIT-213	ENST00000543324	FNDC7	Q5VTL7	733 aa		5.84	□□□□□ -1.47
CIT-213	ENST00000543324	RTL6	Q6ICC9	239 aa		5.84	□□□□□ -1.47
CIT-213	ENST00000543324	TMEM211	Q6ICI0	200 aa		5.84	□□□□□ -1.47
CIT-213	ENST00000543324	ARHGAP11A	Q6P4F7	1023 aa		5.84	□□□□□ -1.47
CIT-213	ENST00000543324	TMEM81	Q6P7N7	255 aa		5.84	□□□□□ -1.47
CIT-213	ENST00000543324	OPN5	Q6U736	354 aa		5.84	□□□□□ -1.47
CIT-213	ENST00000543324	TRIL	Q7L0X0	811 aa		5.84	□□□□□ -1.47
CIT-213	ENST00000543324	BTLA	Q7Z6A9	289 aa		5.84	□□□□□ -1.47

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