RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 LYRM1O43325 122 aa5.4□□□□□ -1.54
XRCC4-206ENST00000542685 TSPAN2O60636 221 aa5.4□□□□□ -1.54
XRCC4-206ENST00000542685 SDC3O75056 442 aa5.4□□□□□ -1.54
XRCC4-206ENST00000542685 SEC22BO75396 215 aa5.4□□□□□ -1.54
XRCC4-206ENST00000542685 ATG12O94817 140 aa5.4□□□□□ -1.54
XRCC4-206ENST00000542685 NDUFB8O95169 186 aa5.4□□□□□ -1.54
XRCC4-206ENST00000542685 MPC2O95563 127 aa5.4□□□□□ -1.54
XRCC4-206ENST00000542685 FADS2O95864 444 aaKnown RBP5.4□□□□□ -1.54
XRCC4-206ENST00000542685 AGR2O95994 175 aa5.4□□□□□ -1.54
XRCC4-206ENST00000542685 SERPINA1P01009 418 aa5.4□□□□□ -1.54
XRCC4-206ENST00000542685 IL1AP01583 271 aa5.4□□□□□ -1.54
XRCC4-206ENST00000542685 APOC3P02656 99 aa5.4□□□□□ -1.54
XRCC4-206ENST00000542685 MT-ND1P03886 318 aa5.4□□□□□ -1.54
XRCC4-206ENST00000542685 ALDOAP04075 364 aaKnown RBP5.4□□□□□ -1.54
XRCC4-206ENST00000542685 ICAM1P05362 532 aa5.4□□□□□ -1.54
XRCC4-206ENST00000542685 CRHP06850 196 aa5.4□□□□□ -1.54
XRCC4-206ENST00000542685 CNPP09543 421 aaKnown RBP5.4□□□□□ -1.54
XRCC4-206ENST00000542685 FAM90A13PP0C7W8 464 aa5.4□□□□□ -1.54
XRCC4-206ENST00000542685 FAM90A24PP0C7X0 464 aa5.4□□□□□ -1.54
XRCC4-206ENST00000542685 CSH1P0DML2 217 aa5.4□□□□□ -1.54
XRCC4-206ENST00000542685 CSH2P0DML3 217 aa5.4□□□□□ -1.54
XRCC4-206ENST00000542685 CYP4B1P13584 511 aa5.4□□□□□ -1.54
XRCC4-206ENST00000542685 ADRB3P13945 408 aa5.4□□□□□ -1.54
XRCC4-206ENST00000542685 MUC1P15941 1255 aaPredicted RBP5.4□□□□□ -1.54
XRCC4-206ENST00000542685 ANXA7P20073 488 aaKnown RBP5.4□□□□□ -1.54
XRCC4-206ENST00000542685 GADD45AP24522 165 aa5.4□□□□□ -1.54
XRCC4-206ENST00000542685 LCN1P31025 176 aa5.4□□□□□ -1.54
XRCC4-206ENST00000542685 HOXA13P31271 388 aaPredicted RBP5.4□□□□□ -1.54
XRCC4-206ENST00000542685 CSNK1EP49674 416 aaKnown RBP5.4□□□□□ -1.54
XRCC4-206ENST00000542685 CSRP3P50461 194 aa5.4□□□□□ -1.54
XRCC4-206ENST00000542685 PKIAP61925 76 aa5.4□□□□□ -1.54
XRCC4-206ENST00000542685 NUTF2P61970 127 aaKnown RBP5.4□□□□□ -1.54
XRCC4-206ENST00000542685 PPP3R1P63098 170 aa5.4□□□□□ -1.54
XRCC4-206ENST00000542685 SLC7A9P82251 487 aa5.4□□□□□ -1.54
XRCC4-206ENST00000542685 IL5RAQ01344 420 aa5.4□□□□□ -1.54
XRCC4-206ENST00000542685 CNTN1Q12860 1018 aa5.4□□□□□ -1.54
XRCC4-206ENST00000542685 MAD2L1Q13257 205 aaPredicted RBP5.4□□□□□ -1.54
XRCC4-206ENST00000542685 SGCGQ13326 291 aa5.4□□□□□ -1.54
XRCC4-206ENST00000542685 ALKBH1Q13686 389 aaKnown RBP5.4□□□□□ -1.54
XRCC4-206ENST00000542685 OPCMLQ14982 345 aa5.4□□□□□ -1.54
XRCC4-206ENST00000542685 PRTGQ2VWP7 1150 aa5.4□□□□□ -1.54
XRCC4-206ENST00000542685 SLC35D3Q5M8T2 416 aa5.4□□□□□ -1.54
XRCC4-206ENST00000542685 MRNIPQ6NTE8 343 aa5.4□□□□□ -1.54
XRCC4-206ENST00000542685 PAPD4Q6PIY7 484 aaKnown RBP5.4□□□□□ -1.54
XRCC4-206ENST00000542685 TMEM270Q6UE05 265 aa5.4□□□□□ -1.54
XRCC4-206ENST00000542685 CHMP1BQ7LBR1 199 aa5.4□□□□□ -1.54
XRCC4-206ENST00000542685 SLC16A13Q7RTY0 426 aa5.4□□□□□ -1.54
XRCC4-206ENST00000542685 RABEPKQ7Z6M1 372 aa5.4□□□□□ -1.54
XRCC4-206ENST00000542685 RFX6Q8HWS3 928 aa5.4□□□□□ -1.54
XRCC4-206ENST00000542685 GID4Q8IVV7 300 aa5.4□□□□□ -1.54
XRCC4-206ENST00000542685 ZNF561Q8N587 486 aa5.4□□□□□ -1.54
XRCC4-206ENST00000542685 ADPRHL1Q8NDY3 354 aa5.4□□□□□ -1.54
XRCC4-206ENST00000542685 OR5T1Q8NG75 326 aa5.4□□□□□ -1.54
XRCC4-206ENST00000542685 OR5J2Q8NH18 312 aa5.4□□□□□ -1.54
XRCC4-206ENST00000542685 CEP76Q8TAP6 659 aa5.4□□□□□ -1.54
XRCC4-206ENST00000542685 GPR151Q8TDV0 419 aa5.4□□□□□ -1.54
XRCC4-206ENST00000542685 KCNJ9Q92806 393 aa5.4□□□□□ -1.54
XRCC4-206ENST00000542685 FAM122AQ96E09 287 aa5.4□□□□□ -1.54
XRCC4-206ENST00000542685 MRPS24Q96EL2 167 aaKnown RBP5.4□□□□□ -1.54
XRCC4-206ENST00000542685 RRNAD1Q96FB5 475 aaKnown RBP5.4□□□□□ -1.54
XRCC4-206ENST00000542685 OTUB1Q96FW1 271 aaPredicted RBP5.4□□□□□ -1.54
XRCC4-206ENST00000542685 ZNF354BQ96LW1 612 aa5.4□□□□□ -1.54
XRCC4-206ENST00000542685 ZNF599Q96NL3 588 aa5.4□□□□□ -1.54
XRCC4-206ENST00000542685 C7orf50Q9BRJ6 194 aaKnown RBP5.4□□□□□ -1.54
XRCC4-206ENST00000542685 GATA5Q9BWX5 397 aaPredicted RBP5.4□□□□□ -1.54
XRCC4-206ENST00000542685 BBS2Q9BXC9 721 aa5.4□□□□□ -1.54
XRCC4-206ENST00000542685 BEX2Q9BXY8 128 aa5.4□□□□□ -1.54
XRCC4-206ENST00000542685 PRRG3Q9BZD7 231 aa5.4□□□□□ -1.54
XRCC4-206ENST00000542685 ACTR6Q9GZN1 396 aa5.4□□□□□ -1.54
XRCC4-206ENST00000542685 OPN3Q9H1Y3 402 aaPredicted RBP5.4□□□□□ -1.54
XRCC4-206ENST00000542685 HIPK2Q9H2X6 1198 aa5.4□□□□□ -1.54
XRCC4-206ENST00000542685 PIGMQ9H3S5 423 aa5.4□□□□□ -1.54
XRCC4-206ENST00000542685 REEP4Q9H6H4 257 aa5.4□□□□□ -1.54
XRCC4-206ENST00000542685 METTL8Q9H825 291 aaKnown RBP5.4□□□□□ -1.54
XRCC4-206ENST00000542685 EVA1AQ9H8M9 152 aa5.4□□□□□ -1.54
XRCC4-206ENST00000542685 GORASP2Q9H8Y8 452 aa5.4□□□□□ -1.54
XRCC4-206ENST00000542685 APOBEC3GQ9HC16 384 aaKnown RBP5.4□□□□□ -1.54
XRCC4-206ENST00000542685 ASCL3Q9NQ33 180 aa5.4□□□□□ -1.54
XRCC4-206ENST00000542685 ITM2CQ9NQX7 267 aa5.4□□□□□ -1.54
XRCC4-206ENST00000542685 ABCB8Q9NUT2 735 aa5.4□□□□□ -1.54
XRCC4-206ENST00000542685 MSRB1Q9NZV6 116 aa5.4□□□□□ -1.54
XRCC4-206ENST00000542685 TNFSF13BQ9Y275 285 aa5.4□□□□□ -1.54
XRCC4-206ENST00000542685 CARHSP1Q9Y2V2 147 aaKnown RBP5.4□□□□□ -1.54
XRCC4-206ENST00000542685 TP53BP1Q12888 1972 aaPredicted RBP5.39□□□□□ -1.55
XRCC4-206ENST00000542685 A0A0U1RQF3 1178 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 A0A0U1RQS6 177 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 TMEM272A0A1B0GTI8 110 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 A0A1W2PN81 502 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 GNG14A0A1W2PPG7 69 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 FAM149AA5PLN7 773 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 A6NCN8 305 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 FAM74A7A6NL05 159 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 C5orf58C9J3I9 102 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 NEDD8-MDP1E9PL57 170 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 NPIPB9F8W1W9 429 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 WWP2O00308 870 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 ADAMDEC1O15204 470 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 PLA2G10O15496 165 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 TLX3O43711 291 aaPredicted RBP5.39□□□□□ -1.55
XRCC4-206ENST00000542685 HPGDSO60760 199 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms