RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 TIPRLO75663 272 aa8.5□□□□□ -1.05
DDX55-208ENST00000541259 KRT36O76013 467 aa8.5□□□□□ -1.05
DDX55-208ENST00000541259 WISP1O95388 367 aa8.5□□□□□ -1.05
DDX55-208ENST00000541259 GPIP06744 558 aa8.5□□□□□ -1.05
DDX55-208ENST00000541259 RFPL3SP0C7P2 107 aa8.5□□□□□ -1.05
DDX55-208ENST00000541259 RAP2AP10114 183 aa8.5□□□□□ -1.05
DDX55-208ENST00000541259 NME2P22392 152 aa8.5□□□□□ -1.05
DDX55-208ENST00000541259 PSMA4P25789 261 aaKnown RBP8.5□□□□□ -1.05
DDX55-208ENST00000541259 HTR2AP28223 471 aa8.5□□□□□ -1.05
DDX55-208ENST00000541259 SLC7A1P30825 629 aa8.5□□□□□ -1.05
DDX55-208ENST00000541259 RFC3P40938 356 aa8.5□□□□□ -1.05
DDX55-208ENST00000541259 CCR4P51679 360 aa8.5□□□□□ -1.05
DDX55-208ENST00000541259 RGS8P57771 180 aaPredicted RBP8.5□□□□□ -1.05
DDX55-208ENST00000541259 CHRNB3Q05901 458 aa8.5□□□□□ -1.05
DDX55-208ENST00000541259 POU4F2Q12837 409 aa8.5□□□□□ -1.05
DDX55-208ENST00000541259 EPS8Q12929 822 aa8.5□□□□□ -1.05
DDX55-208ENST00000541259 FOXD4Q12950 439 aaPredicted RBP8.5□□□□□ -1.05
DDX55-208ENST00000541259 COL28A1Q2UY09 1125 aa8.5□□□□□ -1.05
DDX55-208ENST00000541259 FAM98BQ52LJ0 330 aaKnown RBP8.5□□□□□ -1.05
DDX55-208ENST00000541259 IGFL3Q6UXB1 125 aa8.5□□□□□ -1.05
DDX55-208ENST00000541259 DEF8Q6ZN54 512 aa8.5□□□□□ -1.05
DDX55-208ENST00000541259 ZDHHC21Q8IVQ6 265 aa8.5□□□□□ -1.05
DDX55-208ENST00000541259 MISPQ8IVT2 679 aa8.5□□□□□ -1.05
DDX55-208ENST00000541259 ZADH2Q8N4Q0 377 aa8.5□□□□□ -1.05
DDX55-208ENST00000541259 TMCO5AQ8N6Q1 288 aa8.5□□□□□ -1.05
DDX55-208ENST00000541259 RBMXL3Q8N7X1 1067 aaKnown RBP8.5□□□□□ -1.05
DDX55-208ENST00000541259 EXD3Q8N9H8 876 aa8.5□□□□□ -1.05
DDX55-208ENST00000541259 FADS6Q8N9I5 356 aa8.5□□□□□ -1.05
DDX55-208ENST00000541259 PAPD5Q8NDF8 572 aaKnown RBP8.5□□□□□ -1.05
DDX55-208ENST00000541259 OR2M7Q8NG81 312 aa8.5□□□□□ -1.05
DDX55-208ENST00000541259 B4GALNT2Q8NHY0 566 aa8.5□□□□□ -1.05
DDX55-208ENST00000541259 GEMIN6Q8WXD5 167 aaKnown RBP8.5□□□□□ -1.05
DDX55-208ENST00000541259 DUS3LQ96G46 650 aaKnown RBP8.5□□□□□ -1.05
DDX55-208ENST00000541259 TMEM41AQ96HV5 264 aa8.5□□□□□ -1.05
DDX55-208ENST00000541259 C5orf34Q96MH7 638 aa8.5□□□□□ -1.05
DDX55-208ENST00000541259 GNRHR2Q96P88 292 aa8.5□□□□□ -1.05
DDX55-208ENST00000541259 MCHR1Q99705 422 aa8.5□□□□□ -1.05
DDX55-208ENST00000541259 NPAS1Q99742 590 aa8.5□□□□□ -1.05
DDX55-208ENST00000541259 CHID1Q9BWS9 393 aa8.5□□□□□ -1.05
DDX55-208ENST00000541259 ARMC7Q9H6L4 198 aa8.5□□□□□ -1.05
DDX55-208ENST00000541259 ZNF71Q9NQZ8 489 aaPredicted RBP8.5□□□□□ -1.05
DDX55-208ENST00000541259 SDHAF3Q9NRP4 125 aa8.5□□□□□ -1.05
DDX55-208ENST00000541259 KLHL28Q9NXS3 571 aa8.5□□□□□ -1.05
DDX55-208ENST00000541259 NDUFAF4Q9P032 175 aa8.5□□□□□ -1.05
DDX55-208ENST00000541259 RHCGQ9UBD6 479 aa8.5□□□□□ -1.05
DDX55-208ENST00000541259 FBXL2Q9UKC9 423 aa8.5□□□□□ -1.05
DDX55-208ENST00000541259 BOD1L1Q8NFC6 3051 aa8.5□□□□□ -1.05
DDX55-208ENST00000541259 ITPR1Q14643 2758 aa8.5□□□□□ -1.05
DDX55-208ENST00000541259 IGLV3-32A0A0A0MS00 114 aa8.49□□□□□ -1.05
DDX55-208ENST00000541259 LRRC3CA6NJW4 275 aa8.49□□□□□ -1.05
DDX55-208ENST00000541259 CPSF4LA6NMK7 179 aaKnown RBP8.49□□□□□ -1.05
DDX55-208ENST00000541259 SHISA8B8ZZ34 492 aa8.49□□□□□ -1.05
DDX55-208ENST00000541259 FFAR1O14842 300 aa8.49□□□□□ -1.05
DDX55-208ENST00000541259 SNX4O95219 450 aa8.49□□□□□ -1.05
DDX55-208ENST00000541259 NTN1O95631 604 aa8.49□□□□□ -1.05
DDX55-208ENST00000541259 THY1P04216 161 aa8.49□□□□□ -1.05
DDX55-208ENST00000541259 IFNW1P05000 195 aa8.49□□□□□ -1.05
DDX55-208ENST00000541259 FABP3P05413 133 aa8.49□□□□□ -1.05
DDX55-208ENST00000541259 MAGEA2P43356 314 aa8.49□□□□□ -1.05
DDX55-208ENST00000541259 IDH2P48735 452 aaKnown RBP8.49□□□□□ -1.05
DDX55-208ENST00000541259 MASP1P48740 699 aa8.49□□□□□ -1.05
DDX55-208ENST00000541259 MEOX1P50221 254 aa8.49□□□□□ -1.05
DDX55-208ENST00000541259 P2RX1P51575 399 aa8.49□□□□□ -1.05
DDX55-208ENST00000541259 PMP22Q01453 160 aa8.49□□□□□ -1.05
DDX55-208ENST00000541259 FOXO1Q12778 655 aa8.49□□□□□ -1.05
DDX55-208ENST00000541259 OR1Q1Q15612 314 aa8.49□□□□□ -1.05
DDX55-208ENST00000541259 ZSWIM7Q19AV6 140 aa8.49□□□□□ -1.05
DDX55-208ENST00000541259 C4orf17Q53FE4 359 aa8.49□□□□□ -1.05
DDX55-208ENST00000541259 ENTPD8Q5MY95 495 aa8.49□□□□□ -1.05
DDX55-208ENST00000541259 TIGD3Q6B0B8 471 aa8.49□□□□□ -1.05
DDX55-208ENST00000541259 ARSKQ6UWY0 536 aa8.49□□□□□ -1.05
DDX55-208ENST00000541259 Q6ZS92 163 aa8.49□□□□□ -1.05
DDX55-208ENST00000541259 ASB18Q6ZVZ8 466 aa8.49□□□□□ -1.05
DDX55-208ENST00000541259 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.49□□□□□ -1.05
DDX55-208ENST00000541259 PLCZ1Q86YW0 608 aa8.49□□□□□ -1.05
DDX55-208ENST00000541259 OR1J4Q8NGS1 313 aa8.49□□□□□ -1.05
DDX55-208ENST00000541259 OR5W2Q8NH69 310 aa8.49□□□□□ -1.05
DDX55-208ENST00000541259 GPR119Q8TDV5 335 aa8.49□□□□□ -1.05
DDX55-208ENST00000541259 PHF10Q8WUB8 498 aaKnown RBP8.49□□□□□ -1.05
DDX55-208ENST00000541259 FAM173AQ9BQD7 235 aa8.49□□□□□ -1.05
DDX55-208ENST00000541259 MAGIXQ9H6Y5 334 aa8.49□□□□□ -1.05
DDX55-208ENST00000541259 S100A14Q9HCY8 104 aa8.49□□□□□ -1.05
DDX55-208ENST00000541259 IL1RAPQ9NPH3 570 aa8.49□□□□□ -1.05
DDX55-208ENST00000541259 EXOSC3Q9NQT5 275 aaKnown RBP8.49□□□□□ -1.05
DDX55-208ENST00000541259 A4GNTQ9UNA3 340 aa8.49□□□□□ -1.05
DDX55-208ENST00000541259 SLC9A8Q9Y2E8 581 aa8.49□□□□□ -1.05
DDX55-208ENST00000541259 KLF13Q9Y2Y9 288 aaPredicted RBP8.49□□□□□ -1.05
DDX55-208ENST00000541259 AP4S1Q9Y587 144 aa8.49□□□□□ -1.05
DDX55-208ENST00000541259 ENPP4Q9Y6X5 453 aa8.49□□□□□ -1.05
DDX55-208ENST00000541259 ATRXP46100 2492 aa8.49□□□□□ -1.05
DDX55-208ENST00000541259 KIAA1549Q9HCM3 1950 aa8.49□□□□□ -1.05
DDX55-208ENST00000541259 CACNA1BQ00975 2339 aa8.49□□□□□ -1.05
DDX55-208ENST00000541259 TLN1Q9Y490 2541 aaKnown RBP8.49□□□□□ -1.05
DDX55-208ENST00000541259 PRRC2CQ9Y520 2896 aaKnown RBP8.49□□□□□ -1.05
DDX55-208ENST00000541259 SPENQ96T58 3664 aaKnown RBP8.49□□□□□ -1.05
DDX55-208ENST00000541259 TRAV17A0A0B4J275 112 aa8.48□□□□□ -1.05
DDX55-208ENST00000541259 ANKUB1A6NFN9 424 aa8.48□□□□□ -1.05
DDX55-208ENST00000541259 H0Y3Z8 333 aa8.48□□□□□ -1.05
DDX55-208ENST00000541259 H0YHG0 523 aa8.48□□□□□ -1.05
DDX55-208ENST00000541259 LYPD3O95274 346 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms